Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|02006
Gene name
Locationscaffold_02:2352633..2353919
Strand+
Gene length (bp)1286
Transcript length (bp)273
Coding sequence length (bp)273
Protein length (aa) 91

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|02006
MVRPYLATALLFVSAVVATGGSARAAVRKGVDENETIVIKTSKKGVKNDPVDKQIELLANDICPSAALVYAVKVN
VVDGKQQSEHLEVTE*
Coding >Ophcf2|02006
ATGGTCCGCCCGTACCTCGCAACCGCCCTTCTCTTCGTCTCCGCAGTTGTAGCCACAGGAGGCAGCGCCAGAGCC
GCCGTCCGCAAAGGCGTCGACGAGAACGAGACTATCGTCATCAAGACTTCTAAGAAGGGCGTCAAGAACGATCCG
GTCGATAAGCAGATTGAACTGCTGGCCAACGACATCTGCCCATCCGCCGCTCTTGTCTACGCAGTCAAGGTCAAT
GTCGTCGACGGCAAGCAGCAGTCCGAACATCTCGAGGTGACCGAGTAG
Transcript >Ophcf2|02006
ATGGTCCGCCCGTACCTCGCAACCGCCCTTCTCTTCGTCTCCGCAGTTGTAGCCACAGGAGGCAGCGCCAGAGCC
GCCGTCCGCAAAGGCGTCGACGAGAACGAGACTATCGTCATCAAGACTTCTAAGAAGGGCGTCAAGAACGATCCG
GTCGATAAGCAGATTGAACTGCTGGCCAACGACATCTGCCCATCCGCCGCTCTTGTCTACGCAGTCAAGGTCAAT
GTCGTCGACGGCAAGCAGCAGTCCGAACATCTCGAGGTGACCGAGTAG
Gene >Ophcf2|02006
ATGGTCCGCCCGTACCTCGCAACCGCCCTTCTCTGTACGTCAAACGCTCCCAAGCCTCAACACCACTGACAGGAA
GACAGTCGTCTCCGCAGTTGTAGCCACAGGAGGCAGCGCCAGAGCCGCCGTCCGCAAAGGCGTCGACGAGAACGA
GACTATCGTCATCAAGACTTCTAAGAAGGGCGTCAAGAACGATCCGGTCGATAAGCAGATTGAACTGCTGGCCAA
CGACATCGTGAAGAATACCGAAAAGGCTGCCGAGGCTAAAAGGGAGGGGAAGCCGGGCCTGGCTAATAGCCTCAA
CGAACAGAGTACCGGTCCTTTGGCAGAGCAGATTGAACAGCTGGTGAAACTGGAGAGCGGAAAGAATGACGGGAA
AGAGAAAGGTAGGAAAGAGAAAGACAGGAAAGTGGTTGATAGGAAAGAGAAAGACAGAAAAGAGAAAGATGGGAA
AGTGATTGATAGGAAAGAGAAAGGTACGAAAGAGAAAGACAGGAAAGTGGTTGATAGGAAGGAGAAAGACAGGAA
GGAGAAAGACAGGAAGGAGAAAGATAGGAAAGAGGTTGATGAGAAAGAGGATGAGAAGAAAAGGGACAGAGGATG
AACCGCCACCAACTCGAGAATACTGCAGATCTTCTCAAGGAAACAGCTCGCCCATTTCCAAACGCTTCCTCACGG
GTTACAAGGATAATTGAAGGTGGTTAATACTATAGTCTGGGAAATCATTCATTTTGTCATTCGGTCAACTTTCTT
CGTCTTACTTCTGTCACTTGACAACTCAGCTATGCATGTGTGAAGTCACAACACCCGACAGATACTCACCCACAA
CATACCATTCTGGACAGCTCATGAATCTCAAATTAGGCATTCACAGACTCATTGAGTACCAAAAATATTAGCCAC
TAGATAACGTGACCGACCATCACAGACTGGCCCTCATTATGCCGTCATCTGTCAAGTCGTTCCGATGTACGAATC
CCGAGCAAGCGACGGAAGCCGTCTACGTGATGACTTGTCATTCCTCAACACTTTCGTCCCTTTCTCAATGGCTGC
TGCATGAACCAATTCACGAAGTCGTCTGTCGTTGACCACGAGTCAACTCGTCCGTCTTCTGTCCTTTCACAGCCG
TCACTCGAGTCCGATTCGTTGCCACGTAGCAGCTCAACCAGCTGGGCATCTCCCAGTATTTCTGCAAATGTCAGT
GCCCATCCGCCGCTCTTGTCTACGCAGTCAAGGTCAATGTCGTCGACGGCAAGCAGCAGTCCGAACATCTCGAGG
TGACCGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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