Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01972
Gene name
Locationscaffold_02:2251364..2252475
Strand-
Gene length (bp)1111
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 53 75 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01972
MASASTKAGGLAGAIKVVVPLAVGSVGYAAYRVDWRVALRNFFRGPGRNSRVMLLLFVLCSWKSMPLTWTYRVFY
TIIYHNTLRKSPPQTPRHLFKPIINTSRATLLEIDYNLHKSNSTFFTDLDCARSHLVSYLCRHGLNKLAVNQQTA
LVPDPVTGRPARGPLGIMLGSVACSFKREIAPFAAYELWTSIIAWDRKWLYVVTHFVPKGVARPTHWLDSRCVTL
ETRASGDDTDWSSKLHASAVSKYVFKIGRLTVHPAVVLGASGLLPQRPGGWTGGEHQLGTADVGEVDFSVEGDEH
WDWRRVEAQRRKGMELAGHFQALDGSHDLFDGGAGGALGKFAPG*
Coding >Ophcf2|01972
ATGGCTTCGGCTTCGACAAAGGCGGGTGGGCTTGCCGGCGCCATCAAGGTTGTTGTTCCGTTGGCTGTCGGCTCT
GTGGGCTATGCCGCCTATCGCGTCGACTGGCGGGTTGCGTTGCGGAACTTCTTCAGGGGGCCTGGGAGGAATTCG
CGGGTGATGCTGCTGCTTTTCGTCTTGTGCAGTTGGAAGAGCATGCCTCTTACATGGACATATCGCGTCTTCTAC
ACAATCATCTACCACAACACCCTCCGCAAATCACCCCCCCAAACACCACGCCACCTCTTCAAGCCAATCATAAAC
ACGAGCCGCGCAACCCTCCTCGAAATAGACTACAACCTCCACAAGTCAAACTCAACCTTCTTCACCGACCTCGAC
TGCGCACGTTCCCACCTCGTCTCCTACCTCTGTCGCCACGGCCTCAACAAGCTGGCCGTCAACCAGCAGACGGCC
CTCGTCCCCGATCCCGTCACCGGTCGTCCCGCCCGCGGACCTTTGGGCATCATGCTGGGATCTGTTGCGTGTAGC
TTCAAGAGGGAGATTGCGCCTTTTGCTGCGTACGAGCTTTGGACTAGTATCATTGCTTGGGATCGGAAGTGGTTG
TACGTTGTTACTCATTTCGTTCCCAAGGGCGTTGCTAGGCCTACGCACTGGCTCGACAGTCGCTGCGTCACTCTC
GAGACCAGAGCTTCTGGAGATGATACCGACTGGTCCAGCAAGCTACACGCCTCGGCCGTCAGCAAATACGTCTTC
AAGATCGGCCGCCTCACCGTCCATCCTGCCGTCGTCCTCGGCGCTTCGGGTCTGTTGCCGCAGCGGCCTGGCGGG
TGGACTGGCGGAGAGCATCAGCTGGGAACGGCCGACGTTGGCGAGGTTGATTTCTCCGTCGAGGGCGATGAGCAT
TGGGATTGGCGTCGGGTTGAGGCGCAGAGGAGGAAGGGGATGGAGTTGGCTGGGCATTTTCAGGCCTTGGACGGG
TCGCACGATTTGTTTGATGGGGGTGCGGGTGGCGCCCTTGGCAAGTTTGCGCCGGGCTGA
Transcript >Ophcf2|01972
ATGGCTTCGGCTTCGACAAAGGCGGGTGGGCTTGCCGGCGCCATCAAGGTTGTTGTTCCGTTGGCTGTCGGCTCT
GTGGGCTATGCCGCCTATCGCGTCGACTGGCGGGTTGCGTTGCGGAACTTCTTCAGGGGGCCTGGGAGGAATTCG
CGGGTGATGCTGCTGCTTTTCGTCTTGTGCAGTTGGAAGAGCATGCCTCTTACATGGACATATCGCGTCTTCTAC
ACAATCATCTACCACAACACCCTCCGCAAATCACCCCCCCAAACACCACGCCACCTCTTCAAGCCAATCATAAAC
ACGAGCCGCGCAACCCTCCTCGAAATAGACTACAACCTCCACAAGTCAAACTCAACCTTCTTCACCGACCTCGAC
TGCGCACGTTCCCACCTCGTCTCCTACCTCTGTCGCCACGGCCTCAACAAGCTGGCCGTCAACCAGCAGACGGCC
CTCGTCCCCGATCCCGTCACCGGTCGTCCCGCCCGCGGACCTTTGGGCATCATGCTGGGATCTGTTGCGTGTAGC
TTCAAGAGGGAGATTGCGCCTTTTGCTGCGTACGAGCTTTGGACTAGTATCATTGCTTGGGATCGGAAGTGGTTG
TACGTTGTTACTCATTTCGTTCCCAAGGGCGTTGCTAGGCCTACGCACTGGCTCGACAGTCGCTGCGTCACTCTC
GAGACCAGAGCTTCTGGAGATGATACCGACTGGTCCAGCAAGCTACACGCCTCGGCCGTCAGCAAATACGTCTTC
AAGATCGGCCGCCTCACCGTCCATCCTGCCGTCGTCCTCGGCGCTTCGGGTCTGTTGCCGCAGCGGCCTGGCGGG
TGGACTGGCGGAGAGCATCAGCTGGGAACGGCCGACGTTGGCGAGGTTGATTTCTCCGTCGAGGGCGATGAGCAT
TGGGATTGGCGTCGGGTTGAGGCGCAGAGGAGGAAGGGGATGGAGTTGGCTGGGCATTTTCAGGCCTTGGACGGG
TCGCACGATTTGTTTGATGGGGGTGCGGGTGGCGCCCTTGGCAAGTTTGCGCCGGGCTGA
Gene >Ophcf2|01972
ATGGCTTCGGCTTCGACAAAGGCGGGTGGGCTTGCCGGCGCCATCAAGGTTGTTGTTCCGTTGGCTGTCGGCTCT
GTGGGCTATGCCGCCTATCGCGTCGACTGGCGGGTTGCGTTGCGGAACTTCTTCAGGGGGCCTGGGAGGAATTCG
CGGGTGATGCTGCTGCTTTTCGTCTTGTGCAGTTGGAAGAGCATGCCTCTTACATGGACAGTGCGTCTGATTTCC
ATTCCGAACCTACTCTTCTTCACTTGATGATGAATCCTCGCTAATCGCTGTGTAACCTCAGTATCGCGTCTTCTA
CACAATCATCTACCACAACACCCTCCGCAAATCACCCCCCCAAACACCACGCCACCTCTTCAAGCCAATCATAAA
CACGAGCCGCGCAACCCTCCTCGAAATAGACTACAACCTCCACAAGTCAAACTCAACCTTCTTCACCGACCTCGA
CTGCGCACGTTCCCACCTCGTCTCCTACCTCTGTCGCCACGGCCTCAACAAGCTGGCCGTCAACCAGCAGACGGC
CCTCGTCCCCGATCCCGTCACCGGTCGTCCCGCCCGCGGACCTTTGGGCATCATGCTGGGATCTGTTGCGTGTAG
CTTCAAGAGGGAGATTGCGCCTTTTGCTGCGTACGAGCTTTGGACTAGTATCATTGCTTGGGATCGGAAGTGGTT
GTACGTTGTTACTCATTTCGTTCCCAAGGGCGTTGCTAGGCCTACGCACTGGCTCGACAGTCGCTGCGTCACTCT
CGAGACCAGAGCTTCTGGAGATGATACCGACTGGTCCAGCAAGCTACACGCCTCGGCCGTCAGCAAATACGTCTT
CAAGATCGGCCGCCTCACCGTCCATCCTGCCGTCGTCCTCGGCGCTTCGGGTCTGTTGCCGCAGCGGCCTGGCGG
GTGGACTGGCGGAGAGCATCAGCTGGGAACGGCCGACGTTGGCGAGGTTGATTTCTCCGTCGAGGGCGATGAGCA
TTGGGATTGGCGTCGGGTTGAGGCGCAGAGGAGGAAGGGGATGGAGTTGGCTGGGCATTTTCAGGCCTTGGACGG
GTCGCACGATTTGTTTGATGGGGGTGCGGGTGGCGCCCTTGGCAAGTTTGCGCCGGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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