Protein ID | Ophcf2|01954 |
Gene name | |
Location | scaffold_02:2192077..2194821 |
Strand | + |
Gene length (bp) | 2744 |
Transcript length (bp) | 2460 |
Coding sequence length (bp) | 2460 |
Protein length (aa) | 820 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.2E-47 | 256 | 385 |
PF00004 | AAA | ATPase family associated with various cellular activities (AAA) | 1.7E-47 | 530 | 663 |
PF17862 | AAA_lid_3 | AAA+ lid domain | 4.3E-13 | 408 | 447 |
PF17862 | AAA_lid_3 | AAA+ lid domain | 1.3E-06 | 685 | 724 |
PF02359 | CDC48_N | Cell division protein 48 (CDC48), N-terminal domain | 8.8E-18 | 40 | 121 |
PF07724 | AAA_2 | AAA domain (Cdc48 subfamily) | 2.3E-07 | 256 | 353 |
PF07728 | AAA_5 | AAA domain (dynein-related subfamily) | 3.8E-06 | 255 | 374 |
PF02933 | CDC48_2 | Cell division protein 48 (CDC48), domain 2 | 1.5E-07 | 142 | 203 |
PF09336 | Vps4_C | Vps4 C terminal oligomerisation domain | 1.1E-04 | 728 | 779 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005524 | ATP binding | Yes |
GO:0016887 | ATP hydrolysis activity | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0005488 | binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0003824 | catalytic activity | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
GO:0032553 | ribonucleotide binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0000166 | nucleotide binding | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0036094 | small molecule binding | No |
GO:0043167 | ion binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01954 MASHHEDTKKVNLIDPSGAEIKNEDDTATAILKKKKKPNQLMVTDAVNDDNSIIALSDATMESLQLFRGDTVLVR GKKRKDTVLIVLAEDDLDDGSARINRVVRHNLRVKHGDMITIHPCPDIKYAKRIAVLPIADTIEGLTGSLFDVYL SPYFREAYRPVRKGDTFLIRGGMRQVEFKVVDVDPPEYGIVAQDTVIHCDGEPLQRDEEENNLNEVGYDDIGGCR KQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESN LRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRF GRFDREVDIGIPDPTGRLEILQIHTKNMKLGEDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDED TIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLEGVKQDLRESVQYPVDHPDKYLKFGLS PSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAK ARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDEPGRLGILKA QLRKTPVAADVDLGFIASKSHGFSGADLGFITQRAVKIAIKEAITLDIERAKAREAAGEDVAMDEDVEDPVPELT KAHFEEAMQMARRSVTDVEIRRYEAFAQQMKNAGPGAFFKFPESGGGGQTEGGADNGFGDAGNDDDLYD* |
Coding | >Ophcf2|01954 ATGGCTTCTCATCACGAAGACACCAAGAAGGTCAACTTGATCGACCCTTCCGGTGCCGAAATCAAAAACGAAGAT GACACCGCAACGGCGATTCTCAAAAAGAAGAAGAAGCCCAACCAGTTGATGGTCACCGATGCCGTCAACGACGAC AACAGCATCATCGCTCTGTCCGATGCCACCATGGAGTCTCTTCAGCTCTTCCGCGGTGACACCGTACTCGTCAGA GGAAAGAAGCGCAAGGACACCGTTCTCATCGTCCTGGCCGAGGACGATCTAGACGACGGCAGCGCCAGAATCAAC CGTGTCGTCCGTCACAATCTCCGCGTCAAGCACGGTGACATGATCACCATTCACCCCTGCCCGGATATCAAATAT GCCAAGAGGATCGCTGTTCTGCCCATCGCCGACACTATCGAGGGTCTGACCGGCTCCCTCTTCGACGTCTACCTC TCTCCTTACTTTCGAGAGGCTTACCGACCGGTGCGCAAGGGCGACACGTTTCTGATTCGCGGTGGCATGCGGCAA GTCGAGTTCAAAGTCGTCGACGTCGACCCACCCGAGTACGGTATCGTCGCGCAAGACACCGTCATTCACTGCGAC GGCGAGCCCCTTCAGCGTGACGAGGAGGAGAACAACCTGAACGAGGTTGGGTACGACGACATCGGTGGCTGCAGG AAGCAGATGGCTCAGATCCGAGAGATGGTTGAGCTGCCTCTTCGCCATCCTCAGCTCTTCAAGTCCATTGGCATC AAGCCCCCTCGCGGAGTTTTGCTCTACGGACCCCCGGGTACGGGAAAGACGCTCATGGCCCGCGCCGTCGCCAAC GAAACGGGCGCCTTCTTCTTCCTCATCAACGGTCCAGAGATCATGTCCAAGATGGCGGGCGAGTCCGAGTCCAAT CTGCGTAAAGCTTTCGAGGAGGCCGAGAAGAACTCGCCGGCCATCATCTTCATCGACGAGATCGACTCGATAGCG CCCAAGCGAGAGAAGACCAATGGCGAGGTCGAGAGGCGTGTCGTCTCCCAGCTGCTGACGCTCATGGACGGCATG AAGGCTCGCTCCAACGTGGTTGTCATGGCCGCCACGAACCGCCCCAACTCTATCGATCCGGCCCTCCGTCGTTTC GGTCGCTTCGACCGCGAGGTGGACATTGGCATCCCCGACCCGACCGGCCGACTGGAGATTCTGCAGATTCACACC AAGAACATGAAGCTGGGCGAAGATGTCGACCTGGAGCAGATCGCCGCCGAGACGCACGGCTATGTCGGTTCCGAC GTTGCCGCTCTCTGCTCCGAGGCGGCCATGCAGCAGATCCGCGAGAAGATGGATCTCATCGACCTGGACGAGGAC ACGATCGACGCCGAGGTCCTCGACTCCCTCGGCGTCACCATGGAGAACTTCCGCTTCGCCTTGGGCGTTTCGAAC CCGTCGGCCCTTCGCGAGGTTGCCGTTGTCGAGGTCCCCAACGTCCGATGGGAAGACATTGGAGGCCTCGAGGGG GTCAAGCAGGACCTCAGGGAGAGCGTCCAGTATCCCGTCGACCATCCCGACAAGTATCTCAAGTTCGGCCTGTCT CCGTCTCGTGGTGTGCTGTTCTACGGGCCCCCGGGTACCGGTAAAACCATGTTGGCCAAGGCCGTCGCCAACGAG TGCGCCGCCAACTTCATCTCCGTCAAGGGCCCGGAGCTCCTCAGCATGTGGTTCGGCGAGTCGGAGAGCAACATC CGCGACATCTTCGACAAGGCTCGCGCCGCCGCTCCCTGCGTCGTCTTCCTCGATGAGCTCGACTCCATCGCCAAG GCCCGTGGTGGCTCCGTCGGCGACGCCGGCGGTGCGTCTGATCGAGTTGTCAACCAGCTCCTGACTGAAATGGAC GGCATGACATCCAAGAAGAACGTCTTCGTCATCGGCGCCACCAACAGGCCCGAGCAGCTCGACCCGGCGCTGTGT CGCCCGGGACGTCTCGACTCTCTCATCTACGTGCCGCTGCCCGACGAGCCCGGCCGGCTGGGTATCCTCAAGGCC CAGCTGCGCAAGACACCCGTGGCGGCCGACGTCGACCTGGGCTTCATCGCGAGCAAGTCTCACGGCTTCTCGGGT GCCGATCTCGGCTTCATCACGCAACGCGCCGTCAAGATTGCCATCAAGGAGGCAATCACGCTCGACATTGAGCGC GCCAAGGCTCGAGAGGCGGCCGGCGAGGACGTTGCCATGGACGAGGACGTGGAGGATCCGGTGCCGGAGCTGACC AAGGCGCACTTTGAGGAGGCGATGCAGATGGCGCGTCGGTCGGTGACGGATGTCGAGATTCGCCGCTACGAGGCC TTTGCGCAGCAGATGAAGAACGCGGGCCCCGGAGCCTTCTTCAAGTTCCCGGAGAGCGGCGGCGGTGGCCAGACC GAAGGCGGAGCCGACAACGGTTTCGGCGATGCCGGCAACGACGACGATCTCTACGATTGA |
Transcript | >Ophcf2|01954 ATGGCTTCTCATCACGAAGACACCAAGAAGGTCAACTTGATCGACCCTTCCGGTGCCGAAATCAAAAACGAAGAT GACACCGCAACGGCGATTCTCAAAAAGAAGAAGAAGCCCAACCAGTTGATGGTCACCGATGCCGTCAACGACGAC AACAGCATCATCGCTCTGTCCGATGCCACCATGGAGTCTCTTCAGCTCTTCCGCGGTGACACCGTACTCGTCAGA GGAAAGAAGCGCAAGGACACCGTTCTCATCGTCCTGGCCGAGGACGATCTAGACGACGGCAGCGCCAGAATCAAC CGTGTCGTCCGTCACAATCTCCGCGTCAAGCACGGTGACATGATCACCATTCACCCCTGCCCGGATATCAAATAT GCCAAGAGGATCGCTGTTCTGCCCATCGCCGACACTATCGAGGGTCTGACCGGCTCCCTCTTCGACGTCTACCTC TCTCCTTACTTTCGAGAGGCTTACCGACCGGTGCGCAAGGGCGACACGTTTCTGATTCGCGGTGGCATGCGGCAA GTCGAGTTCAAAGTCGTCGACGTCGACCCACCCGAGTACGGTATCGTCGCGCAAGACACCGTCATTCACTGCGAC GGCGAGCCCCTTCAGCGTGACGAGGAGGAGAACAACCTGAACGAGGTTGGGTACGACGACATCGGTGGCTGCAGG AAGCAGATGGCTCAGATCCGAGAGATGGTTGAGCTGCCTCTTCGCCATCCTCAGCTCTTCAAGTCCATTGGCATC AAGCCCCCTCGCGGAGTTTTGCTCTACGGACCCCCGGGTACGGGAAAGACGCTCATGGCCCGCGCCGTCGCCAAC GAAACGGGCGCCTTCTTCTTCCTCATCAACGGTCCAGAGATCATGTCCAAGATGGCGGGCGAGTCCGAGTCCAAT CTGCGTAAAGCTTTCGAGGAGGCCGAGAAGAACTCGCCGGCCATCATCTTCATCGACGAGATCGACTCGATAGCG CCCAAGCGAGAGAAGACCAATGGCGAGGTCGAGAGGCGTGTCGTCTCCCAGCTGCTGACGCTCATGGACGGCATG AAGGCTCGCTCCAACGTGGTTGTCATGGCCGCCACGAACCGCCCCAACTCTATCGATCCGGCCCTCCGTCGTTTC GGTCGCTTCGACCGCGAGGTGGACATTGGCATCCCCGACCCGACCGGCCGACTGGAGATTCTGCAGATTCACACC AAGAACATGAAGCTGGGCGAAGATGTCGACCTGGAGCAGATCGCCGCCGAGACGCACGGCTATGTCGGTTCCGAC GTTGCCGCTCTCTGCTCCGAGGCGGCCATGCAGCAGATCCGCGAGAAGATGGATCTCATCGACCTGGACGAGGAC ACGATCGACGCCGAGGTCCTCGACTCCCTCGGCGTCACCATGGAGAACTTCCGCTTCGCCTTGGGCGTTTCGAAC CCGTCGGCCCTTCGCGAGGTTGCCGTTGTCGAGGTCCCCAACGTCCGATGGGAAGACATTGGAGGCCTCGAGGGG GTCAAGCAGGACCTCAGGGAGAGCGTCCAGTATCCCGTCGACCATCCCGACAAGTATCTCAAGTTCGGCCTGTCT CCGTCTCGTGGTGTGCTGTTCTACGGGCCCCCGGGTACCGGTAAAACCATGTTGGCCAAGGCCGTCGCCAACGAG TGCGCCGCCAACTTCATCTCCGTCAAGGGCCCGGAGCTCCTCAGCATGTGGTTCGGCGAGTCGGAGAGCAACATC CGCGACATCTTCGACAAGGCTCGCGCCGCCGCTCCCTGCGTCGTCTTCCTCGATGAGCTCGACTCCATCGCCAAG GCCCGTGGTGGCTCCGTCGGCGACGCCGGCGGTGCGTCTGATCGAGTTGTCAACCAGCTCCTGACTGAAATGGAC GGCATGACATCCAAGAAGAACGTCTTCGTCATCGGCGCCACCAACAGGCCCGAGCAGCTCGACCCGGCGCTGTGT CGCCCGGGACGTCTCGACTCTCTCATCTACGTGCCGCTGCCCGACGAGCCCGGCCGGCTGGGTATCCTCAAGGCC CAGCTGCGCAAGACACCCGTGGCGGCCGACGTCGACCTGGGCTTCATCGCGAGCAAGTCTCACGGCTTCTCGGGT GCCGATCTCGGCTTCATCACGCAACGCGCCGTCAAGATTGCCATCAAGGAGGCAATCACGCTCGACATTGAGCGC GCCAAGGCTCGAGAGGCGGCCGGCGAGGACGTTGCCATGGACGAGGACGTGGAGGATCCGGTGCCGGAGCTGACC AAGGCGCACTTTGAGGAGGCGATGCAGATGGCGCGTCGGTCGGTGACGGATGTCGAGATTCGCCGCTACGAGGCC TTTGCGCAGCAGATGAAGAACGCGGGCCCCGGAGCCTTCTTCAAGTTCCCGGAGAGCGGCGGCGGTGGCCAGACC GAAGGCGGAGCCGACAACGGTTTCGGCGATGCCGGCAACGACGACGATCTCTACGATTGA |
Gene | >Ophcf2|01954 ATGGCTTCTCATCACGAAGACACCAAGAAGGTCAACTTGATGTATGCTTGCCTCCCTCGCCAATAGTTATTCGTC TGAGAGGTAAATGCTGACTTCTGCTCTTGCAGCGACCCTTCCGGTGCCGAAATCAAAAACGTTTGTCATCCCCAT CTTTTGCCGAGTTGGCCGTCCGCTCACCGACTCTCAGGAAGATGACACCGCAACGGCGATTCTCAAAAAGAAGAA GAAGCCCAACCAGTTGATGTAGGCGCCTTTCCTCGCTTTTATTTTTTTGGCTGGCCTAAACGTCTGCAGGGTCAC CGATGCCGTCAACGACGACAACAGCATCATCGCTCTGTCCGATGCCACCATGGAGTCTCTTCAGCTCTTCCGCGG TGACACCGTACTCGTCAGAGGAAAGAAGCGCAAGGACACCGTTCTCATCGTCCTGGCCGAGGACGATCTAGACGA CGGCAGCGCCAGAATCAACCGTGTCGTCCGTCACAATCTCCGCGTCAAGCACGGTGACATGATCACCATTCACCC CTGCCCGGATATCAAATATGTAGGTTCCGCCCGTCTTTGAGCCCGGACCGCAGCACTGATGCTCTAGATAGGCCA AGAGGATCGCTGTTCTGCCCATCGCCGACACTATCGAGGGTCTGACCGGCTCCCTCTTCGACGTCTACCTCTCTC CTTACTTTCGAGAGGCTTACCGACCGGTGCGCAAGGGCGACACGTTTCTGATTCGCGGTGGCATGCGGCAAGTCG AGTTCAAAGTCGTCGACGTCGACCCACCCGAGTACGGTATCGTCGCGCAAGACACCGTCATTCACTGCGACGGCG AGCCCCTTCAGCGTGACGAGGAGGAGAACAACCTGAACGAGGTTGGGTACGACGACATCGGTGGCTGCAGGAAGC AGATGGCTCAGATCCGAGAGATGGTTGAGCTGCCTCTTCGCCATCCTCAGCTCTTCAAGTCCATTGGCATCAAGC CCCCTCGCGGAGTTTTGCTCTACGGACCCCCGGGTACGGGAAAGACGCTCATGGCCCGCGCCGTCGCCAACGAAA CGGGCGCCTTCTTCTTCCTCATCAACGGTCCAGAGATCATGTCCAAGATGGCGGGCGAGTCCGAGTCCAATCTGC GTAAAGCTTTCGAGGAGGCCGAGAAGAACTCGCCGGCCATCATCTTCATCGACGAGATCGACTCGATAGCGCCCA AGCGAGAGAAGACCAATGGCGAGGTCGAGAGGCGTGTCGTCTCCCAGCTGCTGACGCTCATGGACGGCATGAAGG CTCGCTCCAACGTGGTTGTCATGGCCGCCACGAACCGCCCCAACTCTATCGATCCGGCCCTCCGTCGTTTCGGTC GCTTCGACCGCGAGGTGGACATTGGCATCCCCGACCCGACCGGCCGACTGGAGATTCTGCAGATTCACACCAAGA ACATGAAGCTGGGCGAAGATGTCGACCTGGAGCAGATCGCCGCCGAGACGCACGGCTATGTCGGTTCCGACGTTG CCGCTCTCTGCTCCGAGGCGGCCATGCAGCAGATCCGCGAGAAGATGGATCTCATCGACCTGGACGAGGACACGA TCGACGCCGAGGTCCTCGACTCCCTCGGCGTCACCATGGAGAACTTCCGCTTCGCCTTGGGCGTTTCGAACCCGT CGGCCCTTCGCGAGGTTGCCGTTGTCGAGGTCCCCAACGTCCGATGGGAAGACATTGGAGGCCTCGAGGGGGTCA AGCAGGACCTCAGGGAGAGCGTCCAGTATCCCGTCGACCATCCCGACAAGTATCTCAAGTTCGGCCTGTCTCCGT CTCGTGGTGTGCTGTTCTACGGGCCCCCGGGTACCGGTAAAACCATGTTGGCCAAGGCCGTCGCCAACGAGTGCG CCGCCAACTTCATCTCCGTCAAGGGCCCGGAGCTCCTCAGCATGTGGTTCGGCGAGTCGGAGAGCAACATCCGCG ACATCTTCGACAAGGCTCGCGCCGCCGCTCCCTGCGTCGTCTTCCTCGATGAGCTCGACTCCATCGCCAAGGCCC GTGGTGGCTCCGTCGGCGACGCCGGCGGTGCGTCTGATCGAGTTGTCAACCAGCTCCTGACTGGTGAGATCTCTT TTAATTTGGTGTGTTCATGCCACGGATGAAGTCGACTGACCAAGCTGGCAGAAATGGACGGCATGACATCCAAGA AGAACGTCTTCGTCATCGGCGCCACCAACAGGCCCGAGCAGCTCGACCCGGCGCTGTGTCGCCCGGGACGTCTCG ACTCTCTCATCTACGTGCCGCTGCCCGACGAGCCCGGCCGGCTGGGTATCCTCAAGGCCCAGCTGCGCAAGACAC CCGTGGCGGCCGACGTCGACCTGGGCTTCATCGCGAGCAAGTCTCACGGCTTCTCGGGTGCCGATCTCGGCTTCA TCACGCAACGCGCCGTCAAGATTGCCATCAAGGAGGCAATCACGCTCGACATTGAGCGCGCCAAGGCTCGAGAGG CGGCCGGCGAGGACGTTGCCATGGACGAGGACGTGGAGGATCCGGTGCCGGAGCTGACCAAGGCGCACTTTGAGG AGGCGATGCAGATGGCGCGTCGGTCGGTGACGGATGTCGAGATTCGCCGCTACGAGGCCTTTGCGCAGCAGATGA AGAACGCGGGCCCCGGAGCCTTCTTCAAGTTCCCGGAGAGCGGCGGCGGTGGCCAGACCGAAGGCGGAGCCGACA ACGGTTTCGGCGATGCCGGCAACGACGACGATCTCTACGATTGA |