Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|01952
Gene name
Location	scaffold_02:2186529..2187432
Strand	-
Gene length (bp)	903
Transcript length (bp)	738
Coding sequence length (bp)	738
Protein length (aa)	246

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08590	DUF1771	Domain of unknown function (DUF1771)	8.2E-25	26	88
PF01713	Smr	Smr domain	1.2E-09	98	155

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|01952 MSIPLTRLGGRALHAGDNDDIEREFDHLRSLARAEADKRNSCFDRSRQAYKSGDGAAAKALSNQGKKHDAKMDEY NRQASDYIFRENNAPGRVEPDAIDLHGQFVEEAERILEQRIRQDQARGQTHLHAIVGKGNHSAGHVQKLKPKVED LCRELGLRYQTEENAGRIYINLQGGEPVPPPQHHPQQQQPSYHQPHHQQPHHHQPQHHQQQQHGQANQQDDVAQM VEKALPRILRKLERACCVVM*
Coding	>Ophcf2\|01952 ATGTCAATCCCATTGACCCGGCTAGGCGGTCGAGCCCTCCACGCAGGCGACAATGACGACATCGAGCGCGAATTC GATCACCTGCGCAGCCTCGCCCGCGCCGAAGCCGACAAGCGAAACTCGTGCTTCGACAGGTCGCGACAAGCCTAC AAGTCCGGAGACGGTGCCGCCGCAAAGGCCCTCTCCAACCAAGGAAAGAAGCACGACGCCAAGATGGACGAGTAC AACCGTCAGGCCTCGGATTACATCTTCCGCGAGAACAACGCGCCTGGTCGCGTCGAGCCGGACGCCATAGACCTG CACGGCCAATTCGTCGAGGAGGCTGAGCGCATTCTCGAACAGCGCATACGTCAAGATCAGGCGCGCGGCCAGACT CATCTGCACGCCATCGTCGGGAAAGGCAACCATTCGGCTGGCCACGTGCAGAAGCTCAAGCCAAAGGTCGAGGAC TTGTGTCGCGAGCTGGGGCTGAGGTATCAGACCGAGGAGAACGCGGGAAGGATATACATCAACCTTCAAGGGGGA GAGCCGGTGCCTCCTCCTCAGCATCATCCGCAGCAGCAGCAACCTTCATATCACCAGCCGCACCACCAACAGCCT CACCATCATCAGCCTCAACATCACCAGCAGCAGCAACACGGGCAAGCCAACCAGCAAGATGACGTCGCCCAAATG GTGGAAAAAGCCCTTCCTCGCATCCTGCGCAAGCTGGAAAGGGCCTGCTGTGTCGTCATGTAG
Transcript	>Ophcf2\|01952 ATGTCAATCCCATTGACCCGGCTAGGCGGTCGAGCCCTCCACGCAGGCGACAATGACGACATCGAGCGCGAATTC GATCACCTGCGCAGCCTCGCCCGCGCCGAAGCCGACAAGCGAAACTCGTGCTTCGACAGGTCGCGACAAGCCTAC AAGTCCGGAGACGGTGCCGCCGCAAAGGCCCTCTCCAACCAAGGAAAGAAGCACGACGCCAAGATGGACGAGTAC AACCGTCAGGCCTCGGATTACATCTTCCGCGAGAACAACGCGCCTGGTCGCGTCGAGCCGGACGCCATAGACCTG CACGGCCAATTCGTCGAGGAGGCTGAGCGCATTCTCGAACAGCGCATACGTCAAGATCAGGCGCGCGGCCAGACT CATCTGCACGCCATCGTCGGGAAAGGCAACCATTCGGCTGGCCACGTGCAGAAGCTCAAGCCAAAGGTCGAGGAC TTGTGTCGCGAGCTGGGGCTGAGGTATCAGACCGAGGAGAACGCGGGAAGGATATACATCAACCTTCAAGGGGGA GAGCCGGTGCCTCCTCCTCAGCATCATCCGCAGCAGCAGCAACCTTCATATCACCAGCCGCACCACCAACAGCCT CACCATCATCAGCCTCAACATCACCAGCAGCAGCAACACGGGCAAGCCAACCAGCAAGATGACGTCGCCCAAATG GTGGAAAAAGCCCTTCCTCGCATCCTGCGCAAGCTGGAAAGGGCCTGCTGTGTCGTCATGTAG
Gene	>Ophcf2\|01952 ATGTCAATCCCATTGACCCGGCTAGGCGGTCGAGGTAACTCGTCCCTCTCGTCCCTCCTCCTATCCCATTATTGT CCATCGGGGTTCCCTCGCTCTTCATGACTGACACTACCCCCTCCTCCTCCCCCGCCGCCGTACAGCCCTCCACGC AGGCGACAATGACGACATCGAGCGCGAATTCGATCACCTGCGCAGCCTCGCCCGCGCCGAAGCCGACAAGCGAAA CTCGTGCTTCGACAGGGTACGAATCCCAGCACATCTCACCCCACGGGACTCCTACTGACAGCCAAACCATGACAG TCGCGACAAGCCTACAAGTCCGGAGACGGTGCCGCCGCAAAGGCCCTCTCCAACCAAGGAAAGAAGCACGACGCC AAGATGGACGAGTACAACCGTCAGGCCTCGGATTACATCTTCCGCGAGAACAACGCGCCTGGTCGCGTCGAGCCG GACGCCATAGACCTGCACGGCCAATTCGTCGAGGAGGCTGAGCGCATTCTCGAACAGCGCATACGTCAAGATCAG GCGCGCGGCCAGACTCATCTGCACGCCATCGTCGGGAAAGGCAACCATTCGGCTGGCCACGTGCAGAAGCTCAAG CCAAAGGTCGAGGACTTGTGTCGCGAGCTGGGGCTGAGGTATCAGACCGAGGAGAACGCGGGAAGGATATACATC AACCTTCAAGGGGGAGAGCCGGTGCCTCCTCCTCAGCATCATCCGCAGCAGCAGCAACCTTCATATCACCAGCCG CACCACCAACAGCCTCACCATCATCAGCCTCAACATCACCAGCAGCAGCAACACGGGCAAGCCAACCAGCAAGAT GACGTCGCCCAAATGGTGGAAAAAGCCCTTCCTCGCATCCTGCGCAAGCTGGAAAGGGCCTGCTGTGTCGTCATG TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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