Fungal Genomics

General Properties

Protein ID	Ophcf2|01933
Gene name
Location	scaffold_02:2123707..2124297
Strand	-
Gene length (bp)	590
Transcript length (bp)	537
Coding sequence length (bp)	537
Protein length (aa)	179

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF17254	DUF5321	Family of unknown function (DUF5321)	1.2E-51	31	169

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Mitochondrion	Mitochondrial transit peptide	0.0769	0.128	0.0154	0.0607	0.9206	0.0092	0.1026	0.0203	0.0929	0.0185

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	67	86	19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	111.63	58.86	164.39
Alive	In ants, during behavior modification	77.12	37.45	116.79
Dead	In ants, recently dead	81.00	40.13	121.87

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.091353	no
Alive	Dead	0.835145	no
Dead	Fungus	0.135912	no

Orthologs

Orthofinder run ID	4
Orthogroup	4165
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2|6256
Ophiocordyceps australis map64 (Brazil)	OphauB2|6555
Ophiocordyceps camponoti-floridani	Ophcf2|01933 (this protein)
Ophiocordyceps camponoti-rufipedis	Ophun1|3021
Ophiocordyceps kimflemingae	Ophio5|8433
Ophiocordyceps subramaniannii	Hirsu2|8457

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2|01933 MMLSRCAGQARALISSRLIPLQLRRYGSAPATVADVGFWKSLVPKTWRQENQDGEPRPKSKGWNPATYFIVMFLF IGSMSIQMIVLRKEMEQHARRSSVKIALLREIVEKIRNGESVDVEKALGTGDAEREANWEEVLRSIERGETRRKP SKQSLSGDKTANDQGGAQKKTAGIEGFF*
Coding	>Ophcf2|01933 ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCA TCCAAGCAATCCTTGTCGGGGGACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAA GGCTTCTTCTGA
Transcript	>Ophcf2|01933 ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCA TCCAAGCAATCCTTGTCGGGGGACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAA GGCTTCTTCTGA
Gene	>Ophcf2|01933 ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGGTGAGTCGCAACAACGGGCAAGCAGTCGAACCTGGCTAAGA CACAGACGATAGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCATCCAAGCAATCCTTGTCGGGGG ACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAAGGCTTCTTCTGA