Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01933
Gene name
Locationscaffold_02:2123707..2124297
Strand-
Gene length (bp)590
Transcript length (bp)537
Coding sequence length (bp)537
Protein length (aa) 179

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17254 DUF5321 Family of unknown function (DUF5321) 1.2E-51 31 169

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 67 86 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01933
MMLSRCAGQARALISSRLIPLQLRRYGSAPATVADVGFWKSLVPKTWRQENQDGEPRPKSKGWNPATYFIVMFLF
IGSMSIQMIVLRKEMEQHARRSSVKIALLREIVEKIRNGESVDVEKALGTGDAEREANWEEVLRSIERGETRRKP
SKQSLSGDKTANDQGGAQKKTAGIEGFF*
Coding >Ophcf2|01933
ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA
TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC
ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCA
TCCAAGCAATCCTTGTCGGGGGACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAA
GGCTTCTTCTGA
Transcript >Ophcf2|01933
ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA
TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC
ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCA
TCCAAGCAATCCTTGTCGGGGGACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAA
GGCTTCTTCTGA
Gene >Ophcf2|01933
ATGATGCTATCGAGATGCGCAGGTCAGGCCCGGGCCCTAATTTCGAGTCGGCTGATCCCACTACAGCTCCGGAGA
TACGGCAGCGCTCCCGCCACCGTCGCCGACGTCGGCTTCTGGAAGTCGCTAGTCCCCAAGACCTGGCGACAGGAG
AATCAAGATGGCGAGCCGCGACCCAAGTCCAAGGGTTGGAACCCGGCGACGTACTTTATCGTCATGTTTCTCTTC
ATCGGATCCATGTCCATCCAGATGATTGTGCTGCGCAAGGAGATGGAGCAGCACGCACGTCGGTCATCCGTCAAG
ATAGCGTTACTGCGCGAGATTGTCGAAAAGATTCGCAACGGGGAAAGCGTCGACGTCGAAAAGGCGCTGGGCACG
GGCGATGCCGAGAGAGAGGCCAATTGGGAAGAGGGTGAGTCGCAACAACGGGCAAGCAGTCGAACCTGGCTAAGA
CACAGACGATAGTGCTGCGATCAATTGAACGCGGCGAGACGCGACGCAAGCCATCCAAGCAATCCTTGTCGGGGG
ACAAGACAGCCAACGATCAGGGCGGTGCTCAGAAGAAGACGGCTGGCATCGAAGGCTTCTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail