Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01904
Gene name
Locationscaffold_02:2060608..2061769
Strand+
Gene length (bp)1161
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 68 90 22
3 100 122 22
4 129 148 19
5 152 174 22
6 187 209 22
7 220 239 19
8 252 274 22
9 284 302 18
10 309 328 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01904
MDEEKGTLRPLSPFADEELALCPRDEASPSLAVSIAWMVVNTLATVGIVFTNKAIFSDASWRLSQLTFACFHFFV
TWITLLVLASPALAFFVPRRVPLRHLLPLALAMCLNVILPNCSLAFSSITFYQVARVLLTPVVAILNFFLYGATL
PPLAGLALIPACLGVGIVSYYDSLPAIDASIKTTSPLGVAFAMSGVLASSLYTVWIASYHKKLQMSSMQLLYSQA
PMASFMLLYIIPFLDTLPDPSRVSASRWLMVMLSGAFASLINISQFFIVAHTGPVSSTVVGHVKTCTIVCIGWIV
SGRSAGDRALVGVFLAMAAILVYSIVMLEARKSV*
Coding >Ophcf2|01904
ATGGACGAGGAAAAAGGCACGCTTCGCCCACTGTCGCCCTTCGCGGATGAAGAGCTGGCCTTGTGTCCTCGTGAT
GAAGCTTCGCCCTCGCTCGCCGTGTCCATCGCCTGGATGGTCGTCAACACCTTGGCCACAGTCGGAATTGTCTTT
ACCAACAAAGCAATCTTCTCGGATGCCTCGTGGCGCTTGTCTCAGCTCACCTTTGCCTGTTTCCACTTCTTCGTC
ACCTGGATCACACTCTTGGTGCTGGCGAGCCCGGCTCTGGCCTTTTTCGTTCCTCGCCGCGTCCCCCTTCGTCAT
CTGCTTCCTCTCGCCCTCGCCATGTGTCTCAATGTCATTCTTCCCAACTGCTCATTGGCCTTTTCCTCCATCACC
TTTTACCAGGTCGCCCGTGTCTTGCTGACGCCCGTCGTGGCCATCCTCAACTTTTTTCTATATGGGGCTACGTTG
CCACCGCTCGCCGGCCTGGCCCTTATTCCGGCCTGCTTAGGCGTCGGTATCGTATCTTATTACGACTCTCTCCCG
GCTATCGATGCCAGCATCAAGACGACGTCGCCCCTGGGCGTTGCCTTTGCCATGTCCGGTGTCTTGGCCTCTTCA
CTCTACACCGTGTGGATCGCCAGCTACCACAAGAAACTACAGATGAGCAGCATGCAGCTTCTCTACAGCCAAGCA
CCCATGGCCTCATTCATGCTTCTTTACATCATCCCCTTTCTCGATACGCTTCCTGATCCGAGCCGCGTCTCCGCG
TCTAGGTGGCTGATGGTTATGCTCTCCGGAGCCTTTGCCTCTCTCATCAACATATCACAATTCTTCATCGTCGCA
CATACCGGCCCCGTGTCGAGCACCGTCGTTGGTCACGTCAAGACGTGCACCATTGTGTGCATCGGATGGATCGTG
TCTGGCCGGTCTGCCGGCGACAGGGCTCTGGTCGGCGTGTTTCTTGCTATGGCTGCAATACTGGTGTATTCCATC
GTCATGTTGGAAGCTCGCAAGTCGGTGTAG
Transcript >Ophcf2|01904
ATGGACGAGGAAAAAGGCACGCTTCGCCCACTGTCGCCCTTCGCGGATGAAGAGCTGGCCTTGTGTCCTCGTGAT
GAAGCTTCGCCCTCGCTCGCCGTGTCCATCGCCTGGATGGTCGTCAACACCTTGGCCACAGTCGGAATTGTCTTT
ACCAACAAAGCAATCTTCTCGGATGCCTCGTGGCGCTTGTCTCAGCTCACCTTTGCCTGTTTCCACTTCTTCGTC
ACCTGGATCACACTCTTGGTGCTGGCGAGCCCGGCTCTGGCCTTTTTCGTTCCTCGCCGCGTCCCCCTTCGTCAT
CTGCTTCCTCTCGCCCTCGCCATGTGTCTCAATGTCATTCTTCCCAACTGCTCATTGGCCTTTTCCTCCATCACC
TTTTACCAGGTCGCCCGTGTCTTGCTGACGCCCGTCGTGGCCATCCTCAACTTTTTTCTATATGGGGCTACGTTG
CCACCGCTCGCCGGCCTGGCCCTTATTCCGGCCTGCTTAGGCGTCGGTATCGTATCTTATTACGACTCTCTCCCG
GCTATCGATGCCAGCATCAAGACGACGTCGCCCCTGGGCGTTGCCTTTGCCATGTCCGGTGTCTTGGCCTCTTCA
CTCTACACCGTGTGGATCGCCAGCTACCACAAGAAACTACAGATGAGCAGCATGCAGCTTCTCTACAGCCAAGCA
CCCATGGCCTCATTCATGCTTCTTTACATCATCCCCTTTCTCGATACGCTTCCTGATCCGAGCCGCGTCTCCGCG
TCTAGGTGGCTGATGGTTATGCTCTCCGGAGCCTTTGCCTCTCTCATCAACATATCACAATTCTTCATCGTCGCA
CATACCGGCCCCGTGTCGAGCACCGTCGTTGGTCACGTCAAGACGTGCACCATTGTGTGCATCGGATGGATCGTG
TCTGGCCGGTCTGCCGGCGACAGGGCTCTGGTCGGCGTGTTTCTTGCTATGGCTGCAATACTGGTGTATTCCATC
GTCATGTTGGAAGCTCGCAAGTCGGTGTAG
Gene >Ophcf2|01904
ATGGACGAGGAAAAAGGCACGCTTCGCCCACTGTCGCCCTTCGCGGATGAAGAGCTGGCCTTGTGTCCTCGTGAT
GAAGCTTCGCCCTCGCTCGCCGTGTCCATCGCCTGGATGGTCGTCAACACCTTGGCCACAGTCGGAATTGTATGC
CCCAAGACCGTTTCCGAGACGCTGATCCTGCCGCTCATCAAGACTCCTTTCAGGTCTTTACCAACAAAGCAATCT
TCTCGGATGCCTCGTGGCGCTTGTCTCAGCTCACCTTTGCCTGTTTCCACTTCTTCGTCACCTGGATCACACTCT
TGGTGCTGGCGAGCCCGGCTCTGGCCTTTTTCGTTCCTCGCCGCGTCCCCCTTCGTCATCTGCTTCCTCTCGCCC
TCGCCATGTGTCTCAATGTCATTCTTCCCAACTGCTCATTGGCCTTTTCCTCCATCACCTTTTACCAGGTCGCCC
GTGTCTTGCTGACGCCCGTCGTGGCCATCCTCAACTTTTTTCTATATGGGGCTACGTTGCCACCGCTCGCCGGCC
TGGCCCTTATTCCGGCCTGCTTAGGCGTCGGTATCGTATCTTATTACGACTCTCTCCCGGCTATCGATGCCAGCA
TCAAGACGACGTCGCCCCTGGGCGTTGCCTTTGCCATGTCCGGTGTCTTGGCCTCTTCACTCTACACCGTGTGGA
TCGCCAGCTACCACAAGAAACTACAGATGAGCAGCATGCAGCTTCTCTACAGCCAAGCACCCATGGCCTCATTCA
TGCTTCTTTACATCATCCCCTTTCTCGATACGCTTCCTGATCCGAGCCGCGTCTCCGCGTCTAGGTGGCTGATGG
TTATGCTCGTATGCGACTCCCTCTGGTGGTGTGACGGCGTTGACAAACCCAGTCCGGAGCCTTTGCCTCTCTCAT
CAACATATCACAATTCTTCATCGTCGCACATACCGGCCCCGTGTCGAGCACCGTCGTTGGTCACGTCAAGACGTG
CACCATTGTGTGCATCGGATGGATCGTGTCTGGCCGGTCTGCCGGCGACAGGGCTCTGGTCGGCGTGTTTCTTGC
TATGGCTGCAATACTGGTGTGAGACGCTTCTGATGCTAGTCTTCTGTATGCGCCACTCATCTCCGTTGCAGGTAT
TCCATCGTCATGTTGGAAGCTCGCAAGTCGGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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