Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01878
Gene name
Locationscaffold_02:1980551..1982951
Strand-
Gene length (bp)2400
Transcript length (bp)2400
Coding sequence length (bp)2400
Protein length (aa) 800

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.6E-11 294 348
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.2E-11 519 575
PF10378 RRM Putative RRM domain 1.6E-07 81 121

GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:1901363 heterocyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.769 0.6539 0.0671 0.0309 0.0424 0.0008 0.0711 0.0275 0.0305 0.0017

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1742
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6272
Ophiocordyceps australis map64 (Brazil) OphauB2|6937
Ophiocordyceps camponoti-floridani Ophcf2|01878 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4123
Ophiocordyceps kimflemingae Ophio5|4051
Ophiocordyceps subramaniannii Hirsu2|1612

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01878
MQDLEGSVGQGRPSANTANRSQGHASKPSNSDTGFSHGAFTSNISGFADRHPRRGNVPSLNTQAMTQAQLPAPSI
ANDMATPATAFDMQFTPLLPSQLLLGSPFQPGSPAAFGSPQFQSLSGFQQTQQPHANGQPHNGGLSSPVQQTISP
QPYQAMVSPSTYGAPQFYPPQSPPGAYSIQTPLQPASPVSMGSAVVTGTSRTVYLGNIPQETPAEEMLGHVRSGQ
IESVRLLPDKNCAFISFLDASSATHFHSDAILKKLCIKGQDIKVGWGKPSQVPTSVALAVQQSGASRNVYLGNLP
EDISDEELREDLGKFGAIDTIKIVREKNIAFVHYLSIANAIKAVSQLPQDPKWQAPRRVYYGKDRCAYVSKTQQQ
NAAQYLGIAPGYAHMLTGADRDLISNALAQQSVAAAAVATSAGGINNLGNRTIYLGNIHPETTLEEICNVVRGGL
LHHIRYIPDKHICFVTFIDPTAAASFYALSNLQGLMIHNRRLKIGWGKHSGALPPAIALAVSGGASRNVYVGNLD
ETWTEDRLRQDFSEYGEIELVNTLREKSCAFVNFTNIANAIKAIEAIRGRDEYKKFKVNFGKDRCGNPPRQMQQN
QSPRGDGVSSPPPNGSQNGGSPPNGGSCPQSAVLFNATNNPLTVYLNQLSQQVQQQHGQHPMMVQQGLLFNTAQS
SPNDLAQLEAAQQGQLGGHGQSASISNGYAANAAASGATTIGGLLAPGPRSQHNRAVSLPVLPPGFENGGISPSG
EPEPTSNVREGERRGHQYQSSFGGIGNSGGFGLAIQGGLNGWVEEEVAN*
Coding >Ophcf2|01878
ATGCAGGACCTCGAAGGATCCGTTGGTCAGGGTCGTCCTAGTGCCAACACGGCGAACCGCTCTCAGGGCCATGCC
TCGAAGCCCTCCAACAGCGATACCGGCTTCTCCCATGGCGCCTTCACCTCCAACATCTCGGGCTTCGCCGATCGC
CATCCCCGCCGAGGCAATGTCCCGTCTCTCAACACCCAGGCCATGACCCAGGCTCAGCTGCCCGCGCCCTCCATC
GCCAACGACATGGCCACCCCGGCCACCGCCTTCGACATGCAATTCACTCCTCTGCTGCCATCCCAGCTCCTGCTT
GGGAGTCCCTTTCAGCCCGGCAGTCCCGCCGCCTTCGGCAGCCCGCAGTTTCAGAGCCTGTCCGGCTTCCAACAG
ACGCAGCAGCCGCATGCCAACGGCCAGCCGCACAACGGGGGCCTGTCGAGCCCCGTGCAGCAGACCATCTCGCCC
CAGCCTTACCAGGCCATGGTCTCGCCCTCGACCTACGGCGCGCCCCAGTTCTACCCGCCCCAGTCGCCTCCAGGC
GCCTATAGCATACAGACGCCCCTGCAGCCGGCCTCGCCCGTCTCCATGGGCTCGGCCGTCGTCACCGGCACCAGC
CGCACCGTTTATCTCGGAAACATACCTCAGGAAACGCCGGCCGAGGAGATGCTCGGCCATGTGCGGAGCGGCCAG
ATTGAGTCGGTTCGTCTCCTTCCCGACAAGAACTGCGCCTTCATATCCTTTCTCGACGCCAGCTCTGCCACCCAC
TTCCACTCGGATGCCATCTTGAAGAAGCTCTGTATCAAGGGCCAGGACATCAAGGTCGGCTGGGGCAAGCCCTCG
CAGGTGCCTACCTCGGTAGCGCTTGCCGTCCAACAGTCCGGAGCGTCGCGCAACGTCTACTTGGGCAACTTACCC
GAGGACATCTCGGACGAGGAGCTGCGCGAGGATCTCGGCAAGTTTGGGGCCATTGACACTATCAAGATTGTGCGC
GAGAAGAACATCGCCTTCGTCCACTACCTCTCCATCGCCAACGCCATCAAGGCCGTCTCTCAGCTTCCCCAGGAT
CCCAAGTGGCAGGCGCCGCGCCGCGTCTATTACGGCAAAGACCGGTGCGCCTACGTCTCCAAGACACAGCAGCAA
AACGCCGCCCAGTACCTCGGAATCGCCCCGGGATACGCCCACATGCTGACGGGTGCCGACCGGGACCTCATCTCG
AACGCTCTGGCTCAGCAGTCCGTGGCCGCCGCGGCCGTGGCCACGTCTGCAGGGGGCATCAACAACCTCGGCAAC
CGCACCATCTATCTCGGCAACATCCATCCCGAGACGACGCTCGAGGAGATATGCAACGTCGTCAGGGGAGGGCTG
CTGCACCACATCCGATACATCCCGGACAAGCACATTTGCTTCGTCACCTTCATCGATCCGACCGCCGCCGCCTCC
TTCTACGCGCTGAGCAACCTCCAGGGTCTCATGATCCATAATCGCCGCCTGAAGATTGGCTGGGGAAAGCACTCT
GGCGCCCTGCCCCCGGCCATCGCCCTGGCCGTCAGCGGTGGAGCGTCGCGCAACGTCTACGTCGGCAACCTGGAC
GAGACGTGGACCGAGGACAGGCTGCGGCAAGACTTTTCCGAGTACGGCGAGATCGAGCTGGTCAATACGCTCCGC
GAAAAGAGCTGCGCCTTTGTCAACTTCACTAATATTGCAAACGCCATCAAGGCCATAGAGGCCATTCGCGGCAGG
GACGAATACAAGAAGTTCAAGGTCAACTTTGGCAAGGATCGCTGCGGCAACCCTCCCCGCCAGATGCAGCAGAAC
CAGTCTCCCCGCGGCGATGGCGTCTCGTCGCCCCCGCCAAACGGGTCACAGAACGGCGGCTCGCCCCCGAACGGC
GGCTCGTGCCCGCAGTCGGCCGTGCTCTTCAATGCCACCAACAACCCGCTGACCGTCTATCTGAACCAATTATCG
CAGCAGGTGCAGCAGCAGCACGGACAGCACCCGATGATGGTTCAACAGGGTCTCCTCTTCAATACGGCGCAGTCT
TCGCCCAACGACCTTGCGCAGCTCGAGGCGGCTCAGCAGGGCCAGCTCGGCGGCCACGGACAGTCGGCTAGCATC
TCCAACGGCTACGCGGCCAACGCGGCTGCGTCCGGTGCCACGACGATTGGCGGCCTCCTGGCACCGGGACCCCGG
AGCCAGCACAACCGAGCCGTGAGCCTGCCGGTGCTGCCGCCCGGGTTCGAGAACGGAGGCATCAGCCCGAGCGGC
GAACCGGAGCCGACGAGCAATGTACGCGAAGGCGAGCGACGCGGCCATCAATATCAGTCGAGCTTCGGCGGCATC
GGCAACAGCGGCGGTTTCGGACTGGCCATTCAGGGTGGGCTCAACGGATGGGTCGAGGAAGAGGTGGCTAACTGA
Transcript >Ophcf2|01878
ATGCAGGACCTCGAAGGATCCGTTGGTCAGGGTCGTCCTAGTGCCAACACGGCGAACCGCTCTCAGGGCCATGCC
TCGAAGCCCTCCAACAGCGATACCGGCTTCTCCCATGGCGCCTTCACCTCCAACATCTCGGGCTTCGCCGATCGC
CATCCCCGCCGAGGCAATGTCCCGTCTCTCAACACCCAGGCCATGACCCAGGCTCAGCTGCCCGCGCCCTCCATC
GCCAACGACATGGCCACCCCGGCCACCGCCTTCGACATGCAATTCACTCCTCTGCTGCCATCCCAGCTCCTGCTT
GGGAGTCCCTTTCAGCCCGGCAGTCCCGCCGCCTTCGGCAGCCCGCAGTTTCAGAGCCTGTCCGGCTTCCAACAG
ACGCAGCAGCCGCATGCCAACGGCCAGCCGCACAACGGGGGCCTGTCGAGCCCCGTGCAGCAGACCATCTCGCCC
CAGCCTTACCAGGCCATGGTCTCGCCCTCGACCTACGGCGCGCCCCAGTTCTACCCGCCCCAGTCGCCTCCAGGC
GCCTATAGCATACAGACGCCCCTGCAGCCGGCCTCGCCCGTCTCCATGGGCTCGGCCGTCGTCACCGGCACCAGC
CGCACCGTTTATCTCGGAAACATACCTCAGGAAACGCCGGCCGAGGAGATGCTCGGCCATGTGCGGAGCGGCCAG
ATTGAGTCGGTTCGTCTCCTTCCCGACAAGAACTGCGCCTTCATATCCTTTCTCGACGCCAGCTCTGCCACCCAC
TTCCACTCGGATGCCATCTTGAAGAAGCTCTGTATCAAGGGCCAGGACATCAAGGTCGGCTGGGGCAAGCCCTCG
CAGGTGCCTACCTCGGTAGCGCTTGCCGTCCAACAGTCCGGAGCGTCGCGCAACGTCTACTTGGGCAACTTACCC
GAGGACATCTCGGACGAGGAGCTGCGCGAGGATCTCGGCAAGTTTGGGGCCATTGACACTATCAAGATTGTGCGC
GAGAAGAACATCGCCTTCGTCCACTACCTCTCCATCGCCAACGCCATCAAGGCCGTCTCTCAGCTTCCCCAGGAT
CCCAAGTGGCAGGCGCCGCGCCGCGTCTATTACGGCAAAGACCGGTGCGCCTACGTCTCCAAGACACAGCAGCAA
AACGCCGCCCAGTACCTCGGAATCGCCCCGGGATACGCCCACATGCTGACGGGTGCCGACCGGGACCTCATCTCG
AACGCTCTGGCTCAGCAGTCCGTGGCCGCCGCGGCCGTGGCCACGTCTGCAGGGGGCATCAACAACCTCGGCAAC
CGCACCATCTATCTCGGCAACATCCATCCCGAGACGACGCTCGAGGAGATATGCAACGTCGTCAGGGGAGGGCTG
CTGCACCACATCCGATACATCCCGGACAAGCACATTTGCTTCGTCACCTTCATCGATCCGACCGCCGCCGCCTCC
TTCTACGCGCTGAGCAACCTCCAGGGTCTCATGATCCATAATCGCCGCCTGAAGATTGGCTGGGGAAAGCACTCT
GGCGCCCTGCCCCCGGCCATCGCCCTGGCCGTCAGCGGTGGAGCGTCGCGCAACGTCTACGTCGGCAACCTGGAC
GAGACGTGGACCGAGGACAGGCTGCGGCAAGACTTTTCCGAGTACGGCGAGATCGAGCTGGTCAATACGCTCCGC
GAAAAGAGCTGCGCCTTTGTCAACTTCACTAATATTGCAAACGCCATCAAGGCCATAGAGGCCATTCGCGGCAGG
GACGAATACAAGAAGTTCAAGGTCAACTTTGGCAAGGATCGCTGCGGCAACCCTCCCCGCCAGATGCAGCAGAAC
CAGTCTCCCCGCGGCGATGGCGTCTCGTCGCCCCCGCCAAACGGGTCACAGAACGGCGGCTCGCCCCCGAACGGC
GGCTCGTGCCCGCAGTCGGCCGTGCTCTTCAATGCCACCAACAACCCGCTGACCGTCTATCTGAACCAATTATCG
CAGCAGGTGCAGCAGCAGCACGGACAGCACCCGATGATGGTTCAACAGGGTCTCCTCTTCAATACGGCGCAGTCT
TCGCCCAACGACCTTGCGCAGCTCGAGGCGGCTCAGCAGGGCCAGCTCGGCGGCCACGGACAGTCGGCTAGCATC
TCCAACGGCTACGCGGCCAACGCGGCTGCGTCCGGTGCCACGACGATTGGCGGCCTCCTGGCACCGGGACCCCGG
AGCCAGCACAACCGAGCCGTGAGCCTGCCGGTGCTGCCGCCCGGGTTCGAGAACGGAGGCATCAGCCCGAGCGGC
GAACCGGAGCCGACGAGCAATGTACGCGAAGGCGAGCGACGCGGCCATCAATATCAGTCGAGCTTCGGCGGCATC
GGCAACAGCGGCGGTTTCGGACTGGCCATTCAGGGTGGGCTCAACGGATGGGTCGAGGAAGAGGTGGCTAACTGA
Gene >Ophcf2|01878
ATGCAGGACCTCGAAGGATCCGTTGGTCAGGGTCGTCCTAGTGCCAACACGGCGAACCGCTCTCAGGGCCATGCC
TCGAAGCCCTCCAACAGCGATACCGGCTTCTCCCATGGCGCCTTCACCTCCAACATCTCGGGCTTCGCCGATCGC
CATCCCCGCCGAGGCAATGTCCCGTCTCTCAACACCCAGGCCATGACCCAGGCTCAGCTGCCCGCGCCCTCCATC
GCCAACGACATGGCCACCCCGGCCACCGCCTTCGACATGCAATTCACTCCTCTGCTGCCATCCCAGCTCCTGCTT
GGGAGTCCCTTTCAGCCCGGCAGTCCCGCCGCCTTCGGCAGCCCGCAGTTTCAGAGCCTGTCCGGCTTCCAACAG
ACGCAGCAGCCGCATGCCAACGGCCAGCCGCACAACGGGGGCCTGTCGAGCCCCGTGCAGCAGACCATCTCGCCC
CAGCCTTACCAGGCCATGGTCTCGCCCTCGACCTACGGCGCGCCCCAGTTCTACCCGCCCCAGTCGCCTCCAGGC
GCCTATAGCATACAGACGCCCCTGCAGCCGGCCTCGCCCGTCTCCATGGGCTCGGCCGTCGTCACCGGCACCAGC
CGCACCGTTTATCTCGGAAACATACCTCAGGAAACGCCGGCCGAGGAGATGCTCGGCCATGTGCGGAGCGGCCAG
ATTGAGTCGGTTCGTCTCCTTCCCGACAAGAACTGCGCCTTCATATCCTTTCTCGACGCCAGCTCTGCCACCCAC
TTCCACTCGGATGCCATCTTGAAGAAGCTCTGTATCAAGGGCCAGGACATCAAGGTCGGCTGGGGCAAGCCCTCG
CAGGTGCCTACCTCGGTAGCGCTTGCCGTCCAACAGTCCGGAGCGTCGCGCAACGTCTACTTGGGCAACTTACCC
GAGGACATCTCGGACGAGGAGCTGCGCGAGGATCTCGGCAAGTTTGGGGCCATTGACACTATCAAGATTGTGCGC
GAGAAGAACATCGCCTTCGTCCACTACCTCTCCATCGCCAACGCCATCAAGGCCGTCTCTCAGCTTCCCCAGGAT
CCCAAGTGGCAGGCGCCGCGCCGCGTCTATTACGGCAAAGACCGGTGCGCCTACGTCTCCAAGACACAGCAGCAA
AACGCCGCCCAGTACCTCGGAATCGCCCCGGGATACGCCCACATGCTGACGGGTGCCGACCGGGACCTCATCTCG
AACGCTCTGGCTCAGCAGTCCGTGGCCGCCGCGGCCGTGGCCACGTCTGCAGGGGGCATCAACAACCTCGGCAAC
CGCACCATCTATCTCGGCAACATCCATCCCGAGACGACGCTCGAGGAGATATGCAACGTCGTCAGGGGAGGGCTG
CTGCACCACATCCGATACATCCCGGACAAGCACATTTGCTTCGTCACCTTCATCGATCCGACCGCCGCCGCCTCC
TTCTACGCGCTGAGCAACCTCCAGGGTCTCATGATCCATAATCGCCGCCTGAAGATTGGCTGGGGAAAGCACTCT
GGCGCCCTGCCCCCGGCCATCGCCCTGGCCGTCAGCGGTGGAGCGTCGCGCAACGTCTACGTCGGCAACCTGGAC
GAGACGTGGACCGAGGACAGGCTGCGGCAAGACTTTTCCGAGTACGGCGAGATCGAGCTGGTCAATACGCTCCGC
GAAAAGAGCTGCGCCTTTGTCAACTTCACTAATATTGCAAACGCCATCAAGGCCATAGAGGCCATTCGCGGCAGG
GACGAATACAAGAAGTTCAAGGTCAACTTTGGCAAGGATCGCTGCGGCAACCCTCCCCGCCAGATGCAGCAGAAC
CAGTCTCCCCGCGGCGATGGCGTCTCGTCGCCCCCGCCAAACGGGTCACAGAACGGCGGCTCGCCCCCGAACGGC
GGCTCGTGCCCGCAGTCGGCCGTGCTCTTCAATGCCACCAACAACCCGCTGACCGTCTATCTGAACCAATTATCG
CAGCAGGTGCAGCAGCAGCACGGACAGCACCCGATGATGGTTCAACAGGGTCTCCTCTTCAATACGGCGCAGTCT
TCGCCCAACGACCTTGCGCAGCTCGAGGCGGCTCAGCAGGGCCAGCTCGGCGGCCACGGACAGTCGGCTAGCATC
TCCAACGGCTACGCGGCCAACGCGGCTGCGTCCGGTGCCACGACGATTGGCGGCCTCCTGGCACCGGGACCCCGG
AGCCAGCACAACCGAGCCGTGAGCCTGCCGGTGCTGCCGCCCGGGTTCGAGAACGGAGGCATCAGCCCGAGCGGC
GAACCGGAGCCGACGAGCAATGTACGCGAAGGCGAGCGACGCGGCCATCAATATCAGTCGAGCTTCGGCGGCATC
GGCAACAGCGGCGGTTTCGGACTGGCCATTCAGGGTGGGCTCAACGGATGGGTCGAGGAAGAGGTGGCTAACTGA

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