Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01875
Gene name
Locationscaffold_02:1974042..1974910
Strand+
Gene length (bp)868
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20150 2EXR 2EXR family 1.9E-18 44 140

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5976 0.4663 0.1718 0.1878 0.3366 0.162 0.0703 0.2286 0.1374 0.1054

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup5451
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|6934
Ophiocordyceps camponoti-floridani Ophcf2|01875 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|4126
Ophiocordyceps kimflemingae Ophio5|4054
Ophiocordyceps subramaniannii Hirsu2|617

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01875
MAILMAVLSRPPRPGFPSSDRAPRMMRPAHDTQDSVRQRSSGQFHLFPLLPPELRLKIWNMNLPSGRLVPLRCGT
ASPSLHERQRPSRGDVTGFTSNAPIPVNLHVCAESRAEAFKSYRRAFGFARRAGRVIFNPDDDILLFGPHEGYMA
ADSQFHTCMTMCEPAELACVRRVAISDSLFWGDGACSSLTASSLSVEVVRQLAARMPQLEQIIFVPHEDQTDNLP
TVKERMARQIHMAVACICQQKPNWRPPPLEIICMSALMKKGG*
Coding >Ophcf2|01875
ATGGCCATCCTCATGGCTGTCTTAAGCCGCCCACCGCGCCCCGGCTTTCCGAGTTCGGACCGCGCGCCCAGGATG
ATGCGCCCTGCTCACGACACCCAAGATTCCGTCCGTCAGCGCAGCAGCGGCCAGTTCCATCTGTTCCCCCTGCTC
CCGCCCGAGCTGAGGCTCAAGATTTGGAACATGAACCTGCCATCGGGCCGTCTCGTCCCCTTGCGCTGCGGCACC
GCGTCTCCGTCCCTTCACGAAAGACAACGACCCTCTCGCGGCGATGTCACCGGCTTCACTTCAAACGCGCCCATC
CCCGTCAACCTCCACGTCTGCGCCGAGTCACGCGCCGAGGCCTTCAAGAGCTACCGTCGCGCCTTTGGCTTCGCC
CGCCGCGCCGGAAGAGTCATCTTCAATCCGGACGACGATATCCTTCTCTTCGGACCGCACGAAGGCTACATGGCG
GCCGACTCGCAGTTCCACACGTGCATGACCATGTGCGAACCAGCCGAGCTCGCGTGCGTGCGTCGCGTCGCCATC
AGCGACTCCCTCTTCTGGGGAGACGGCGCCTGCAGCTCCCTCACAGCCTCGAGCCTATCTGTCGAGGTGGTGAGG
CAATTGGCGGCCCGCATGCCCCAGCTCGAGCAAATCATCTTTGTGCCGCACGAGGATCAGACCGACAACCTGCCA
ACCGTCAAGGAGCGCATGGCCCGCCAGATTCACATGGCCGTAGCCTGCATATGCCAGCAGAAGCCCAACTGGCGA
CCACCACCATTGGAAATCATCTGCATGAGCGCCCTCATGAAAAAGGGCGGCTGA
Transcript >Ophcf2|01875
ATGGCCATCCTCATGGCTGTCTTAAGCCGCCCACCGCGCCCCGGCTTTCCGAGTTCGGACCGCGCGCCCAGGATG
ATGCGCCCTGCTCACGACACCCAAGATTCCGTCCGTCAGCGCAGCAGCGGCCAGTTCCATCTGTTCCCCCTGCTC
CCGCCCGAGCTGAGGCTCAAGATTTGGAACATGAACCTGCCATCGGGCCGTCTCGTCCCCTTGCGCTGCGGCACC
GCGTCTCCGTCCCTTCACGAAAGACAACGACCCTCTCGCGGCGATGTCACCGGCTTCACTTCAAACGCGCCCATC
CCCGTCAACCTCCACGTCTGCGCCGAGTCACGCGCCGAGGCCTTCAAGAGCTACCGTCGCGCCTTTGGCTTCGCC
CGCCGCGCCGGAAGAGTCATCTTCAATCCGGACGACGATATCCTTCTCTTCGGACCGCACGAAGGCTACATGGCG
GCCGACTCGCAGTTCCACACGTGCATGACCATGTGCGAACCAGCCGAGCTCGCGTGCGTGCGTCGCGTCGCCATC
AGCGACTCCCTCTTCTGGGGAGACGGCGCCTGCAGCTCCCTCACAGCCTCGAGCCTATCTGTCGAGGTGGTGAGG
CAATTGGCGGCCCGCATGCCCCAGCTCGAGCAAATCATCTTTGTGCCGCACGAGGATCAGACCGACAACCTGCCA
ACCGTCAAGGAGCGCATGGCCCGCCAGATTCACATGGCCGTAGCCTGCATATGCCAGCAGAAGCCCAACTGGCGA
CCACCACCATTGGAAATCATCTGCATGAGCGCCCTCATGAAAAAGGGCGGCTGA
Gene >Ophcf2|01875
ATGGCCATCCTCATGGCTGTCTTAAGCCGCCCACCGCGCCCCGGCTTTCCGAGTTCGGACCGCGCGCCCAGGATG
ATGCGCCCTGCTCACGACACCCAAGATTCCGTCCGTCAGCGCAGCAGCGGCCAGTTCGTGAGTGCAGTTCCCTTA
CCCCGGTCCTTCTGTGCGCTCGCGATTCTGACCCTGGCCTAAACAGCATCTGTTCCCCCTGCTCCCGCCCGAGCT
GAGGCTCAAGATTTGGAACATGAACCTGCCATCGGGCCGTCTCGTCCCCTTGCGCTGCGGCACCGCGTCTCCGTC
CCTTCACGAAAGACAACGACCCTCTCGCGGCGATGTCACCGGCTTCACTTCAAACGCGCCCATCCCCGTCAACCT
CCACGTCTGCGCCGAGTCACGCGCCGAGGCCTTCAAGAGCTACCGTCGCGCCTTTGGCTTCGCCCGCCGCGCCGG
AAGAGTCATCTTCAATCCGGACGACGATATCCTTCTCTTCGGACCGCACGAAGGCTACATGGCGGCCGACTCGCA
GTTCCACACGTGCATGACCATGTGCGAACCAGCCGAGCTCGCGTGCGTGCGTCGCGTCGCCATCAGCGACTCCCT
CTTCTGGGGAGACGGCGCCTGCAGCTCCCTCACAGCCTCGAGCCTATCTGTCGAGGTGGTGAGGCAATTGGCGGC
CCGCATGCCCCAGCTCGAGCAAATCATCTTTGTGCCGCACGAGGATCAGACCGACAACCTGCCAACCGTCAAGGA
GCGCATGGCCCGCCAGATTCACATGGCCGTAGCCTGCATATGCCAGCAGAAGCCCAACTGGCGACCACCACCATT
GGAAATCATCTGCATGAGCGCCCTCATGAAAAAGGGCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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