Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01813
Gene name
Locationscaffold_02:1290357..1291347
Strand+
Gene length (bp)990
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 84 106 22
2 110 132 22
3 152 171 19
4 198 220 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01813
MSRSQPFLYSARQCSDWRSPGAVFDPKAITRASLEPTPRRAKPHGPLITLNQHPDSYELPRQPRSCQSLTSRIKN
WIRRLRKIQLALRLLQLTASAGIIVLMVLMTKVEAAFAWATRLTAGASVLHCLYSIHHHARSTARRPPASSAAYQ
AFAVFTDLFISCACTYGAFYTHHSGGSWSTMLENLGLVHVFVPAANYVFIVLGCLNLVTLFISLWLGLVFRKISL
MPPDMNPLEEHLTARPCDEVNNRSSMATSNVEDDWGLLA*
Coding >Ophcf2|01813
ATGAGCCGTTCGCAGCCTTTCTTGTATAGCGCGCGTCAATGCTCCGATTGGCGATCTCCTGGCGCCGTCTTTGAC
CCAAAGGCTATTACCAGGGCCAGCTTGGAGCCTACACCTAGGAGAGCAAAGCCTCACGGGCCTTTAATCACCTTG
AACCAACACCCCGACTCATACGAGTTGCCGCGACAACCGAGGTCCTGCCAATCGCTTACCTCAAGGATCAAGAAT
TGGATCAGGCGGCTGCGTAAAATACAGCTTGCGCTGCGTCTTCTCCAGTTGACTGCTTCCGCTGGCATCATCGTG
CTCATGGTACTCATGACAAAGGTCGAAGCAGCATTTGCTTGGGCCACGAGACTGACCGCTGGAGCTTCGGTACTG
CACTGTCTTTACAGTATCCACCATCATGCGCGCAGCACGGCTCGCCGTCCGCCGGCCTCTTCAGCAGCTTATCAA
GCCTTCGCCGTGTTCACCGATCTCTTCATCTCGTGCGCCTGTACTTATGGGGCTTTCTATACGCACCACAGCGGA
GGGTCTTGGTCCACAATGTTGGAAAACTTAGGTCTCGTGCACGTCTTTGTCCCAGCTGCTAACTATGTCTTCATT
GTACTGGGTTGCTTGAACCTGGTGACCCTATTCATATCATTATGGCTTGGTCTCGTCTTTCGGAAGATCAGTCTG
ATGCCGCCCGATATGAACCCTCTCGAGGAACACCTCACAGCAAGACCTTGTGACGAGGTCAACAATCGGTCGTCC
ATGGCAACTTCCAACGTCGAGGACGACTGGGGATTACTCGCGTAA
Transcript >Ophcf2|01813
ATGAGCCGTTCGCAGCCTTTCTTGTATAGCGCGCGTCAATGCTCCGATTGGCGATCTCCTGGCGCCGTCTTTGAC
CCAAAGGCTATTACCAGGGCCAGCTTGGAGCCTACACCTAGGAGAGCAAAGCCTCACGGGCCTTTAATCACCTTG
AACCAACACCCCGACTCATACGAGTTGCCGCGACAACCGAGGTCCTGCCAATCGCTTACCTCAAGGATCAAGAAT
TGGATCAGGCGGCTGCGTAAAATACAGCTTGCGCTGCGTCTTCTCCAGTTGACTGCTTCCGCTGGCATCATCGTG
CTCATGGTACTCATGACAAAGGTCGAAGCAGCATTTGCTTGGGCCACGAGACTGACCGCTGGAGCTTCGGTACTG
CACTGTCTTTACAGTATCCACCATCATGCGCGCAGCACGGCTCGCCGTCCGCCGGCCTCTTCAGCAGCTTATCAA
GCCTTCGCCGTGTTCACCGATCTCTTCATCTCGTGCGCCTGTACTTATGGGGCTTTCTATACGCACCACAGCGGA
GGGTCTTGGTCCACAATGTTGGAAAACTTAGGTCTCGTGCACGTCTTTGTCCCAGCTGCTAACTATGTCTTCATT
GTACTGGGTTGCTTGAACCTGGTGACCCTATTCATATCATTATGGCTTGGTCTCGTCTTTCGGAAGATCAGTCTG
ATGCCGCCCGATATGAACCCTCTCGAGGAACACCTCACAGCAAGACCTTGTGACGAGGTCAACAATCGGTCGTCC
ATGGCAACTTCCAACGTCGAGGACGACTGGGGATTACTCGCGTAA
Gene >Ophcf2|01813
ATGAGCCGTTCGCAGCCTTTCTTGTATAGCGCGCGTCAATGCTCCGATTGGCGATCTCCTGGCGCCGTCTTTGAC
CCAAAGGCTATTACCAGGGCCAGCTTGGAGCCTACACCTAGGAGAGCAAAGCCTCACGGGCCTTTAATCACCTTG
AACCAACACCCCGAGTAGGTGTCTCCGGCTTTTAGAACGATATTGATCAGGATTGACGTGATCTATAGCTCATAC
GAGTTGCCGCGACAACCGAGGTCCTGCCAATCGCTTACCTCAAGGATCAAGAATTGGATCAGGCGGCTGCGTAAA
ATACAGCTTGCGCTGCGTCTTCTCCAGTTGACTGCTTCCGCTGGCATCATCGTGCTCATGGTACTCATGACAAAG
GTCGAAGCAGCATTTGCTTGGGCCACGAGACTGACCGTAGGAAACGATCAATCATATCATACTGTACGATACGGT
TGCTAATTTGCGTCAAAATCAGGCTGGAGCTTCGGTACTGCACTGTCTTTACAGTATCCACCATCATGCGCGCAG
CACGGCTCGCCGTCCGCCGGCCTCTTCAGCAGCTTATCAAGCCTTCGCCGTGTTCACCGATCTCTTCATCTCGTG
CGCCTGTACTTATGGGGCTTTCTATACGCACCACAGCGGAGGGTCTTGGTCCACAATGTTGGAAAACTTAGGTCT
CGTGCACGTCTTTGTCCCAGCTGCTAACTATGTCTTCATTGTACTGGGTTGCTTGAACCTGGTGACCCTATTCAT
ATCATTATGGCTTGGTCTCGTCTTTCGGAAGATCAGTCTGATGCCGCCCGATATGAACCCTCTCGAGGAACACCT
CACAGCAAGACCTTGTGACGAGGTCAACAATCGGTCGTCCATGGCAACTTCCAACGTCGAGGACGACTGGGGATT
ACTGTCAGCCTTGTCGGACAAGCAAATGAGCAAACCCACGTCACTAACACCGTGTATCCCGTTCGCATCTACAAG
AGCGCAAGCGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail