Protein ID | Ophcf2|01806 |
Gene name | |
Location | scaffold_02:1006986..1009849 |
Strand | - |
Gene length (bp) | 2863 |
Transcript length (bp) | 1785 |
Coding sequence length (bp) | 1785 |
Protein length (aa) | 595 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03142 | Chitin_synth_2 | Chitin synthase | 9.3E-23 | 254 | 541 |
PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 2.4E-13 | 255 | 492 |
PF13641 | Glyco_tranf_2_3 | Glycosyltransferase like family 2 | 1.9E-07 | 141 | 417 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 49 | 71 | 22 |
3 | 99 | 121 | 22 |
4 | 451 | 468 | 17 |
5 | 472 | 494 | 22 |
6 | 501 | 523 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01806 MTTIGEWPVRDIVYTSVVGVVMVMACLEWFLWLAAFIYCLVKVFWKAEHWSIRLLCIGVGVAFALLRFIYLPIMV VTLPLPTQVSQHWPVAAVSFLQWFAFWSFAILLTVPWLFCIYQLVINQLGRTKRIKRVLDDVTAPKVVIVMPCYR EELEVLVKAINSVVDCDYPPACIHVFLSFDGDQVDDLYLNTVEMLGVSLPVGAAYPRSIDVTYKAARITLSRFPH GGKRHCQKSTFKLIDKVYAQYLMRNDNLFILFIDSDCILDKVCLQNFVYDMELSPGNTRDMLAMTGVITSTTRKH SIITLLQDMEYIHGQLFERTVESGCGSVTCLPGALTMLRFSAFRRMAKYYFADKAEQCDDLFDFAKCHLGEDRWL THLFMIGAKKRHQIQMCTSAFCKTEAVQTYRSLVKQRRRWFLGFVTNEVCMLTDWRLWKRYPTLIIVRFMQNTIR TTALLFFIMVVALSTTVVKVDNLPVGFIAVSLGLNWLLMLYFGAKLRRFKVWLYPLMFILNPFFNWYYMVYGIFT AGQRTWGGPRADAAAADSNTTAREAVERAEKQGDELNVVPESFKPAQEARRVASKSTPTTNWILPGNMM* |
Coding | >Ophcf2|01806 ATGACTACAATTGGCGAGTGGCCGGTCAGAGACATTGTCTACACGTCCGTAGTCGGGGTAGTGATGGTCATGGCC TGTCTTGAGTGGTTCCTCTGGCTCGCTGCCTTTATTTACTGTCTGGTCAAGGTATTTTGGAAAGCTGAGCACTGG TCTATCCGTCTCCTTTGCATTGGCGTGGGTGTTGCCTTTGCCTTACTTCGCTTCATCTATCTGCCCATCATGGTG GTTACGCTTCCTCTTCCGACCCAGGTTTCGCAGCACTGGCCTGTGGCCGCAGTGTCCTTTCTGCAGTGGTTCGCC TTTTGGAGTTTCGCCATCCTACTTACTGTGCCCTGGCTATTTTGCATTTATCAGCTTGTCATTAATCAGCTCGGT CGGACCAAACGTATCAAGCGGGTGCTCGACGACGTCACTGCTCCAAAGGTAGTCATTGTTATGCCTTGCTACCGT GAAGAGCTTGAGGTCCTGGTCAAGGCCATCAACTCAGTTGTCGACTGCGATTATCCACCGGCCTGTATTCATGTG TTTCTGTCCTTCGATGGCGACCAAGTGGACGATCTCTACCTCAACACAGTGGAGATGTTGGGAGTGTCTCTTCCT GTGGGCGCGGCGTACCCAAGGAGCATCGACGTGACATACAAGGCGGCCCGCATTACACTCTCTCGCTTCCCACAT GGTGGCAAGCGACACTGCCAGAAATCTACGTTCAAACTCATTGACAAAGTCTACGCGCAGTATCTGATGAGGAAC GACAACCTTTTCATCCTCTTCATCGACTCTGATTGCATTCTAGACAAGGTCTGCTTGCAGAATTTTGTCTACGAT ATGGAGCTCAGCCCAGGAAACACCAGGGATATGCTAGCAATGACCGGCGTCATAACGTCAACGACGCGCAAGCAC AGTATCATCACGCTCCTCCAAGACATGGAGTATATCCATGGACAGTTGTTCGAGCGCACTGTCGAGTCCGGCTGC GGATCAGTCACGTGTCTGCCAGGCGCGCTCACCATGCTTCGCTTCTCGGCTTTCAGAAGAATGGCCAAGTATTAT TTTGCGGATAAAGCGGAGCAATGCGACGATCTTTTCGACTTCGCAAAATGCCACTTGGGTGAAGATCGTTGGCTG ACACATTTGTTCATGATTGGCGCGAAAAAACGTCACCAAATCCAAATGTGCACGTCTGCCTTTTGCAAGACAGAA GCTGTGCAGACATATCGATCTCTGGTCAAGCAGCGGCGCCGATGGTTTCTAGGCTTTGTTACCAACGAGGTCTGC ATGCTGACCGACTGGCGACTTTGGAAGCGATATCCGACCTTGATAATCGTGCGCTTCATGCAGAACACAATTCGT ACCACAGCCCTACTATTTTTCATCATGGTTGTCGCATTGTCGACGACTGTTGTCAAGGTCGATAACCTCCCGGTG GGATTCATTGCCGTTTCGCTGGGTCTTAATTGGCTTCTGATGCTTTACTTCGGCGCCAAATTGCGACGTTTTAAA GTCTGGCTATACCCACTAATGTTTATCCTCAATCCGTTTTTCAACTGGTATTACATGGTTTATGGAATTTTCACT GCCGGTCAGAGAACTTGGGGCGGGCCGCGAGCCGATGCTGCGGCCGCCGATAGCAATACGACGGCCCGAGAGGCT GTGGAGCGAGCCGAGAAGCAAGGCGATGAACTCAACGTCGTTCCGGAGTCTTTCAAGCCAGCTCAAGAGGCGCGG AGAGTCGCAAGCAAGTCGACCCCCACCACAAACTGGATTCTGCCCGGGAACATGATGTAG |
Transcript | >Ophcf2|01806 ATGACTACAATTGGCGAGTGGCCGGTCAGAGACATTGTCTACACGTCCGTAGTCGGGGTAGTGATGGTCATGGCC TGTCTTGAGTGGTTCCTCTGGCTCGCTGCCTTTATTTACTGTCTGGTCAAGGTATTTTGGAAAGCTGAGCACTGG TCTATCCGTCTCCTTTGCATTGGCGTGGGTGTTGCCTTTGCCTTACTTCGCTTCATCTATCTGCCCATCATGGTG GTTACGCTTCCTCTTCCGACCCAGGTTTCGCAGCACTGGCCTGTGGCCGCAGTGTCCTTTCTGCAGTGGTTCGCC TTTTGGAGTTTCGCCATCCTACTTACTGTGCCCTGGCTATTTTGCATTTATCAGCTTGTCATTAATCAGCTCGGT CGGACCAAACGTATCAAGCGGGTGCTCGACGACGTCACTGCTCCAAAGGTAGTCATTGTTATGCCTTGCTACCGT GAAGAGCTTGAGGTCCTGGTCAAGGCCATCAACTCAGTTGTCGACTGCGATTATCCACCGGCCTGTATTCATGTG TTTCTGTCCTTCGATGGCGACCAAGTGGACGATCTCTACCTCAACACAGTGGAGATGTTGGGAGTGTCTCTTCCT GTGGGCGCGGCGTACCCAAGGAGCATCGACGTGACATACAAGGCGGCCCGCATTACACTCTCTCGCTTCCCACAT GGTGGCAAGCGACACTGCCAGAAATCTACGTTCAAACTCATTGACAAAGTCTACGCGCAGTATCTGATGAGGAAC GACAACCTTTTCATCCTCTTCATCGACTCTGATTGCATTCTAGACAAGGTCTGCTTGCAGAATTTTGTCTACGAT ATGGAGCTCAGCCCAGGAAACACCAGGGATATGCTAGCAATGACCGGCGTCATAACGTCAACGACGCGCAAGCAC AGTATCATCACGCTCCTCCAAGACATGGAGTATATCCATGGACAGTTGTTCGAGCGCACTGTCGAGTCCGGCTGC GGATCAGTCACGTGTCTGCCAGGCGCGCTCACCATGCTTCGCTTCTCGGCTTTCAGAAGAATGGCCAAGTATTAT TTTGCGGATAAAGCGGAGCAATGCGACGATCTTTTCGACTTCGCAAAATGCCACTTGGGTGAAGATCGTTGGCTG ACACATTTGTTCATGATTGGCGCGAAAAAACGTCACCAAATCCAAATGTGCACGTCTGCCTTTTGCAAGACAGAA GCTGTGCAGACATATCGATCTCTGGTCAAGCAGCGGCGCCGATGGTTTCTAGGCTTTGTTACCAACGAGGTCTGC ATGCTGACCGACTGGCGACTTTGGAAGCGATATCCGACCTTGATAATCGTGCGCTTCATGCAGAACACAATTCGT ACCACAGCCCTACTATTTTTCATCATGGTTGTCGCATTGTCGACGACTGTTGTCAAGGTCGATAACCTCCCGGTG GGATTCATTGCCGTTTCGCTGGGTCTTAATTGGCTTCTGATGCTTTACTTCGGCGCCAAATTGCGACGTTTTAAA GTCTGGCTATACCCACTAATGTTTATCCTCAATCCGTTTTTCAACTGGTATTACATGGTTTATGGAATTTTCACT GCCGGTCAGAGAACTTGGGGCGGGCCGCGAGCCGATGCTGCGGCCGCCGATAGCAATACGACGGCCCGAGAGGCT GTGGAGCGAGCCGAGAAGCAAGGCGATGAACTCAACGTCGTTCCGGAGTCTTTCAAGCCAGCTCAAGAGGCGCGG AGAGTCGCAAGCAAGTCGACCCCCACCACAAACTGGATTCTGCCCGGGAACATGATGTAG |
Gene | >Ophcf2|01806 ATGACTACAATTGGCGAGTGGCCGGTCAGAGACGTAGGTGTACCCACGAGCACTGCCCGTATGGACCGACTGATG CTCACTACTGGGGCAGATTGTCTACACGTCCGTAGTCGGGGTAGTGATGGTCATGGCCTGTCTTGAGTGGTTCCT CTGGCTCGCTGCCTTTATTTACTGTCTGGTCAAGGTATTTTGGAAAGCTGAGCACTGGTCTATCCGTCTCCTTTG CATTGGCGTGGGTGTTGCCTTTGCCTTACTTCGGTACGTCCTCAGGCTTTCATGCGTAGGTAGGTATCTTGTACC GCTGACCAGAATAGCTTCATCTATCTGCCCATCATGGTGGTTACGCTTCCTCTTCCGACCCAGGTTTCGCAGCAC TGGCCTGTGGCCGCAGTGTCCTTTCTGCAGTGGTTCGCCTTTTGGAGTTTCGCCATCCTACTTACTGTGCCCTGG CTATTTTGCATTTATCAGCTTGTCATTAATCAGCTCGGTCGGACCAAACGTATCAAGCGGGTGCTCGACGACGTC ACTGCTCCAAAGGTAGTCATTGTTATGCCTTGCTACCGTGAAGAGCTTGAGGTCCTGGTCAAGGCCATCAACTCA GTTGTCGACTGCGATTATCCACCGGCCTGTATTCATGTGTTTCTGTCCTTCGATGGCGACCAAGTGGACGATCTC TACCTCAACACAGTGGAGATGTTGGGAGTGTCTCTTCCTGTGGGCGCGGCGTACCCAAGGAGCATCGACGTGACA TACAAGGCGGCCCGCATTACACTCTCTCGCTTCCCACATGGTGGCAAGCGACACTGCCAGAAATCTACGTTCAAA CTCATTGACAAAGTCTACGCGCAGTATCTGATGAGGAACGACAACCTTTTCATCCTCTTCATCGACTCTGATTGC ATTCTAGACAAGGTCTGCTTGCAGAATTTTGTCTACGATATGGAGCTCAGCCCAGGAAACACCAGGGATATGCTA GCAATGACCGGCGTCATAACGTCAACGACGCGCAAGCACAGTATCATCACGCTCCTCCAAGACATGGAGTATATC CATGGACAGTTGTTCGAGCGCACTGTCGAGTCCGGCTGCGGATCAGTCACGTGTCTGCCAGGCGCGCTCACCATG CTTCGCTTCTCGGCTTTCAGAAGAATGGCCAAGTATTATTTTGCGGATAAAGCGGAGCAATGCGACGATCTTTTC GACTTCGCAAAATGCCACTTGGGTGAAGATCGTTGGCTGACACATTTGTTCATGATTGGCGCGAAAAAACGTCAC CAAATCCAAATGTGCACGTCTGCCTTTTGCAAGACAGAAGCTGTGCAGACATATCGATCTCTGGTCAAGCAGCGG CGCCGATGGTTTCTAGGCTTTGTTACCAACGAGGTCTGCATGCTGACCGACTGGCGACTTTGGAAGCGATATCCG ACCTTGATAATCGTGCGCTTCATGCAGAACACAATTCGTACCACAGCCCTACTATTTTTCATCATGGTTGTCGCA TTGTCGACGACTGTTGTCAAGGTCGATAACCTCCCGGTGGGATTCATTGCCGTTTCGCTGGGTCTTAATTGGCTT CTGATGCTTTACTTCGGCGCCAAATTGCGACGTTTTAAAGTCTGGCTATACCCACTAATGTTTATCCTCAATCCG TTTTTCAACTGGTATTACATGGTTTATGGAATTTTCACTGCCGGTCAGAGAACTTGGGGCGGGCCGCGAGCCGAT GCTGCGGCCGCCGATAGCAATACGACGGCCCGAGAGGCTGTGGAGCGAGCCGAGAAGCAAGGCGATGAACTCAAC GTCGTTCCGGAGTCTTTCAAGCCAGCTCAAGAGGCGCGGAGAGTCGCAAGCAAGTCGACCCCCACCACAGTGGGG ATCTGCCGGCAGAGGAGCGTTATCAGACCTCCAGATAATATCGATGGCAAATTTTCGGTTCGACGAAGAATGGCG ACGGGAATCTATGCGCATCCCGATGAAAGTTCAGCATTATGTAGAGACATTCCCACCACAAGGCTAGACGGCTCG CTCAATTGGTATGAGTCGCTGGAAAGCTTCGACTCCTGTCGCTCAGACTACAAATCTTCATCTGCCGTGATGAAG GTTGAAAAGTTCATGGGGGAAGAGGATCGACGCAAATATGTCATAGCGCAAAATATGGCCAGATGTAGCGCCAGC GATAGAGAGCGGATTTCGGGAAATACTACCGGCTAGGAACCCGTACCACTTGGCATCAATGCTACCCAGAGATCA GCACACACAAGCTTTTATACAAAGGGATGACCGGGAAGAGTTCAATTGTCTGTAGTATATTCTGTGATCCATAGC CTGCTGCCCGAATTGTTGTTGACCTCAGCCGAGCTTATGAACAGTGTAGGGCACATGAAGATCAGACGGTCGAGT GGTAATTAACTCGACGTTGTAGTATCAGTGTTATATTCGAGCTCCCAACCACAACGCACCACTCTCCGTCGGGAC TCCATGCTGCTTGGCGCCCAACGAAGTTCGTAGAGGAGGATTCTGTTCTATGCGGTCTCAATGGCTCTTGGGGAT CCTCTATACTGTACTTGGATGCCCAGGTGGCCAAACTCTCCGAAGTAGTGTCATAGTCTTCGGCGTGCGCTGGGT ATCGGTGCGTAGTGCTCATTGATACGCGTGGTTTGCCGCTTGAACCGCCCCGCGACCGCGGAATCACGGGCTTGA GCCAGCGTGGAAGTTGTACTTGATTGGCTTTGTCCTTGAGCGAACCCCGACTGGCGTGATTGACGACTCGGTGAC AAGACAATCTACAGAAATCCCAGAAGAAGATGTTGCCCGATGCATTGCAAAAAGCCAGAACTGGATTCTGCCCGG GAACATGATGTAG |