Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01796
Gene name
Locationscaffold_02:638627..639287
Strand+
Gene length (bp)660
Transcript length (bp)405
Coding sequence length (bp)405
Protein length (aa) 135

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08449 UAA UAA transporter family 7.1E-32 18 117

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0051179 localization No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 45 62 17
3 83 105 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01796
MEWHDTPVVQSILLEAASFSLIFGGCCSNVYALEAIISFEPSSGTLLTFTQFLFVAVTSYISRFDKTRPPFYLKK
AKVPLRRWLVNIVLFFSINLLNNHAFSYSISVPLHIILRSGGAGRNSPEFWNRVGRLVQ*
Coding >Ophcf2|01796
ATGGAGTGGCACGATACCCCTGTCGTCCAATCAATACTACTAGAGGCAGCCTCATTCAGCCTCATATTTGGGGGT
TGTTGTTCAAATGTCTACGCACTGGAAGCTATCATTAGCTTCGAGCCGTCGAGCGGAACGCTTCTGACGTTCACA
CAGTTTCTCTTCGTGGCCGTGACGAGTTACATTTCCCGGTTTGATAAGACCAGGCCGCCGTTTTATCTCAAAAAA
GCAAAAGTGCCTTTGCGGCGTTGGCTCGTCAACATCGTGCTTTTCTTCAGCATCAATCTGTTGAACAATCACGCT
TTCAGTTACAGCATATCCGTTCCGCTTCATATCATTCTACGGTCGGGTGGCGCTGGCCGTAACTCTCCTGAGTTT
TGGAATCGCGTTGGCCGCCTGGTCCAATGA
Transcript >Ophcf2|01796
ATGGAGTGGCACGATACCCCTGTCGTCCAATCAATACTACTAGAGGCAGCCTCATTCAGCCTCATATTTGGGGGT
TGTTGTTCAAATGTCTACGCACTGGAAGCTATCATTAGCTTCGAGCCGTCGAGCGGAACGCTTCTGACGTTCACA
CAGTTTCTCTTCGTGGCCGTGACGAGTTACATTTCCCGGTTTGATAAGACCAGGCCGCCGTTTTATCTCAAAAAA
GCAAAAGTGCCTTTGCGGCGTTGGCTCGTCAACATCGTGCTTTTCTTCAGCATCAATCTGTTGAACAATCACGCT
TTCAGTTACAGCATATCCGTTCCGCTTCATATCATTCTACGGTCGGGTGGCGCTGGCCGTAACTCTCCTGAGTTT
TGGAATCGCGTTGGCCGCCTGGTCCAATGA
Gene >Ophcf2|01796
ATGGAGTGGCACGATACCCCTGTCGTCCAATCAATACTACTAGAGGCAGCCTCATTCAGCCTCATATTTGGGGGT
TGTTGTTCAAATGTAGGGATTCAATGTTGCTCTGGTTATCACTAGTGGGAAACCGCTAACAATAGTTGTTGAGTT
CTAGGTCTACGCACTGGAAGCTATCATTAGGTTAGTAGACATGCCGTTGCTTCGTTTCATCGCAATCGCGAATGG
GCTCTGACGTATGGTATTGCTCTGAAAATATAGCTTCGAGCCGTCGAGCGGTACTTATTCATTCTCCAGATTTTA
CTGCCAGCCGGCTAACTCGCGAATAGGAACGCTTCTGACGTTCACACAGTTTCTCTTCGTGGCCGTGACGAGTTA
CATTTCCCGGTTTGATAAGACCAGGCCGCCGTTTTATCTCAAAAAAGCAAAAGTGCCTTTGCGGCGTTGGCTCGT
CAACATCGTGCTTTTCTTCAGCATCAATCTGTTGAACAATCACGCTTTCAGTTACAGCATATCCGTTCCGCTTCA
TATCATTCTACGGTCGGGTGGTAGCATTACTACGATGCTTGCAGGCTACCTCTTTGGAAAGCGATACTCTCGCCT
CCAGGCGCTGGCCGTAACTCTCCTGAGTTTTGGAATCGCGTTGGCCGCCTGGTCCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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