Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01757
Gene name
Locationscaffold_02:382377..383297
Strand-
Gene length (bp)920
Transcript length (bp)807
Coding sequence length (bp)807
Protein length (aa) 269

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04117 Mpv17_PMP22 Mpv17 / PMP22 family 8.8E-10 171 226

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

Domain # Start End Length
1 110 132 22
2 145 167 22
3 210 229 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01757
MSVKFERETVKQTAQSVLSSAVPEHAGIPGTSGRHPLAERVGTALTGGMKSAGTQGYLAAYIKQLESNPLRTKML
TAGSLAGTQELIASWLAKDRNKHGHYFTSRVPKMAAYGAIVSAPLGHFLIWLLQSFFRGRTSLKAKVMQIVVSNL
LIAPIQNSIYLVAMALIAGARTYHQVRATVRVGFWRVMRVSWITSPICLAFAQKFLPDELWVPFFNLVSFVIGTY
INTVTKKKRLAALRRKHFGDGRNNGMGRTDDYPPPPMGPNPPY*
Coding >Ophcf2|01757
ATGTCGGTCAAGTTTGAGCGCGAGACTGTCAAGCAGACGGCCCAGAGCGTGCTGTCGAGCGCTGTGCCGGAACAT
GCCGGTATCCCCGGTACCAGTGGAAGGCATCCGCTGGCTGAGCGTGTTGGCACTGCTCTTACGGGGGGGATGAAG
AGCGCTGGGACTCAGGGATATCTGGCTGCGTATATCAAGCAGCTCGAGTCCAACCCGCTGCGGACCAAGATGCTT
ACCGCCGGCTCCCTCGCCGGCACCCAGGAGCTCATCGCCTCATGGCTTGCCAAAGATCGCAACAAGCACGGCCAT
TACTTTACCTCTCGCGTCCCCAAGATGGCAGCTTACGGTGCCATTGTCAGCGCGCCGCTCGGTCACTTCCTCATC
TGGCTTCTGCAGAGCTTCTTCCGCGGCCGCACCAGTCTCAAGGCAAAGGTGATGCAGATTGTCGTCAGCAACTTG
CTTATTGCGCCCATTCAAAACAGCATCTATCTGGTGGCCATGGCTCTGATCGCCGGCGCTCGCACTTATCATCAG
GTCCGCGCCACCGTCAGGGTTGGCTTCTGGCGAGTCATGCGCGTCTCGTGGATCACATCGCCCATCTGTCTCGCC
TTTGCGCAAAAGTTCCTCCCCGACGAACTATGGGTTCCCTTCTTCAACCTCGTGTCTTTTGTCATCGGCACCTAC
ATCAACACCGTCACCAAGAAGAAGCGTCTCGCCGCCCTTCGCAGGAAACACTTTGGCGACGGCCGAAACAACGGC
ATGGGACGAACCGACGATTATCCTCCGCCACCCATGGGACCCAACCCGCCTTACTAG
Transcript >Ophcf2|01757
ATGTCGGTCAAGTTTGAGCGCGAGACTGTCAAGCAGACGGCCCAGAGCGTGCTGTCGAGCGCTGTGCCGGAACAT
GCCGGTATCCCCGGTACCAGTGGAAGGCATCCGCTGGCTGAGCGTGTTGGCACTGCTCTTACGGGGGGGATGAAG
AGCGCTGGGACTCAGGGATATCTGGCTGCGTATATCAAGCAGCTCGAGTCCAACCCGCTGCGGACCAAGATGCTT
ACCGCCGGCTCCCTCGCCGGCACCCAGGAGCTCATCGCCTCATGGCTTGCCAAAGATCGCAACAAGCACGGCCAT
TACTTTACCTCTCGCGTCCCCAAGATGGCAGCTTACGGTGCCATTGTCAGCGCGCCGCTCGGTCACTTCCTCATC
TGGCTTCTGCAGAGCTTCTTCCGCGGCCGCACCAGTCTCAAGGCAAAGGTGATGCAGATTGTCGTCAGCAACTTG
CTTATTGCGCCCATTCAAAACAGCATCTATCTGGTGGCCATGGCTCTGATCGCCGGCGCTCGCACTTATCATCAG
GTCCGCGCCACCGTCAGGGTTGGCTTCTGGCGAGTCATGCGCGTCTCGTGGATCACATCGCCCATCTGTCTCGCC
TTTGCGCAAAAGTTCCTCCCCGACGAACTATGGGTTCCCTTCTTCAACCTCGTGTCTTTTGTCATCGGCACCTAC
ATCAACACCGTCACCAAGAAGAAGCGTCTCGCCGCCCTTCGCAGGAAACACTTTGGCGACGGCCGAAACAACGGC
ATGGGACGAACCGACGATTATCCTCCGCCACCCATGGGACCCAACCCGCCTTACTAG
Gene >Ophcf2|01757
ATGTCGGTCAAGTTTGAGCGCGAGACTGTCAAGCAGACGGCCCAGAGCGTGCTGTCGAGCGCTGTGCCGGAACAT
GCCGGTATCCCCGGTACCAGTGGAAGGCATCCGCTGGCTGAGCGTGTTGGCACTGCTCTTACGGGGGGGATGAAG
AGCGCTGGGACTCAGGGATATCTGGCTGTTCGTTCCTAGCTCAACCCTCTTCTTTCCCCGGTTTATCTAGCTGAC
GCGCTCTTGTCGTCAGGCGTATATCAAGCAGCTCGAGTCCAACCCGCTGCGGACCAAGATGCTTACCGCCGGCTC
CCTCGCCGGCACCCAGGAGCTCATCGCCTCATGGCTTGCCAAAGATCGCAACAAGCACGGCCATTACTTTACCTC
TCGCGTCCCCAAGATGGCAGCTTACGGTGCCATTGTCAGCGCGCCGCTCGGTCACTTCCTCATCTGGCTTCTGCA
GAGCTTCTTCCGCGGCCGCACCAGTCTCAAGGCAAAGGTGATGCAGATTGTCGTCAGCAACTTGCTTGTACGTGA
ATCCTCATTCGAACCCTTGGACTCGACTGACGAGGGTTTAGATTGCGCCCATTCAAAACAGCATCTATCTGGTGG
CCATGGCTCTGATCGCCGGCGCTCGCACTTATCATCAGGTCCGCGCCACCGTCAGGGTTGGCTTCTGGCGAGTCA
TGCGCGTCTCGTGGATCACATCGCCCATCTGTCTCGCCTTTGCGCAAAAGTTCCTCCCCGACGAACTATGGGTTC
CCTTCTTCAACCTCGTGTCTTTTGTCATCGGCACCTACATCAACACCGTCACCAAGAAGAAGCGTCTCGCCGCCC
TTCGCAGGAAACACTTTGGCGACGGCCGAAACAACGGCATGGGACGAACCGACGATTATCCTCCGCCACCCATGG
GACCCAACCCGCCTTACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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