Protein ID | Ophcf2|01755 |
Gene name | |
Location | scaffold_02:379233..380692 |
Strand | + |
Gene length (bp) | 1459 |
Transcript length (bp) | 1272 |
Coding sequence length (bp) | 1272 |
Protein length (aa) | 424 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01556 | DnaJ_C | DnaJ C terminal domain | 2.1E-35 | 130 | 350 |
PF00226 | DnaJ | DnaJ domain | 4.8E-22 | 17 | 81 |
PF00684 | DnaJ_CXXCXGXG | DnaJ central domain | 1.1E-14 | 154 | 221 |
GO Term | Description | Terminal node |
---|---|---|
GO:0051082 | unfolded protein binding | Yes |
GO:0031072 | heat shock protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0005515 | protein binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 51 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01755 MAANAPFHGAAEEQEVDLYELLSVDRNASQEQLKKAYRKAALRYHPDKVPAEQRQESEIKFKEMTSAYEILSDEE KRHLYDTHGMAAFDGSRGAGAGVNLDDILSQMFGFDVGGPGRPQRPRKGPNDEQEYKVTLEELYKGKTVKFVANK QVVCAHCKGSGGKDKAKPNKCDRCKGNGKVEALRQIGPGMIGREAVICDHCLGSGQLFKDKDRCKKCKGKRTVQE KKALEMYIPRGSLQGERIVLEGEADQTPDQTPGDIIFTLEEEHHETFSRIGNDLSAELDITLGEALTGFSRVVLT HLDGRGISITRPRGKILRPGDCLRIEGEGMPLKRGESRGDLYLVVNIEFPADNWIKDDAAYEALSKMLPAPNSPI RADEVDEVEYEEGADVDKMGEDSGDPRFTDEWEDEDGEEEVPTQCQTQ* |
Coding | >Ophcf2|01755 ATGGCCGCCAATGCGCCTTTTCATGGGGCTGCTGAGGAGCAAGAGGTTGATCTCTACGAGCTGCTGTCTGTCGAT AGGAATGCCTCGCAAGAGCAGTTAAAAAAGGCCTATCGCAAGGCCGCCCTTCGCTACCACCCGGACAAGGTCCCG GCCGAGCAACGGCAAGAATCCGAAATCAAGTTCAAGGAGATGACGAGCGCGTACGAGATTCTCAGCGACGAGGAG AAGCGCCATCTGTACGATACACACGGCATGGCAGCCTTCGATGGCTCTCGCGGTGCCGGCGCCGGCGTCAATCTC GATGATATCCTGTCGCAAATGTTTGGCTTCGACGTCGGTGGCCCCGGCAGACCTCAGCGGCCGCGGAAAGGCCCC AACGACGAGCAGGAATACAAGGTGACGCTGGAGGAGCTCTATAAGGGCAAGACGGTCAAGTTTGTCGCCAACAAA CAAGTCGTCTGCGCTCATTGCAAGGGCTCGGGCGGCAAGGACAAGGCCAAGCCAAACAAGTGTGATCGCTGCAAG GGTAACGGTAAGGTCGAGGCCTTGCGGCAGATCGGGCCTGGTATGATTGGGCGCGAGGCTGTCATTTGTGATCAC TGCCTTGGATCCGGCCAGCTCTTTAAAGATAAAGACCGCTGCAAGAAGTGCAAAGGGAAGCGCACCGTTCAGGAG AAGAAGGCGCTTGAGATGTACATCCCCCGAGGATCTCTACAAGGCGAGCGCATCGTGTTGGAGGGAGAGGCCGAT CAGACGCCCGATCAGACGCCGGGAGACATCATCTTCACCCTGGAAGAGGAGCACCACGAGACATTTTCTCGCATC GGTAACGATCTTTCTGCCGAACTCGACATCACGCTCGGCGAAGCTCTGACGGGTTTCTCCCGCGTCGTTCTCACC CACCTGGACGGGCGAGGCATCTCGATAACGCGACCGCGGGGCAAGATCCTGAGGCCTGGCGACTGTCTGAGGATT GAGGGAGAGGGCATGCCTCTGAAGCGAGGCGAGAGCCGGGGCGACTTGTATCTCGTCGTCAACATCGAATTCCCC GCGGACAACTGGATAAAGGACGATGCGGCGTACGAAGCTCTCAGCAAGATGCTACCCGCCCCGAACTCGCCCATC CGAGCCGACGAGGTGGACGAGGTCGAGTACGAGGAGGGAGCCGACGTGGACAAAATGGGCGAGGACTCTGGAGAC CCGCGCTTCACCGACGAATGGGAGGACGAAGACGGCGAAGAAGAAGTACCGACTCAATGCCAGACGCAATAG |
Transcript | >Ophcf2|01755 ATGGCCGCCAATGCGCCTTTTCATGGGGCTGCTGAGGAGCAAGAGGTTGATCTCTACGAGCTGCTGTCTGTCGAT AGGAATGCCTCGCAAGAGCAGTTAAAAAAGGCCTATCGCAAGGCCGCCCTTCGCTACCACCCGGACAAGGTCCCG GCCGAGCAACGGCAAGAATCCGAAATCAAGTTCAAGGAGATGACGAGCGCGTACGAGATTCTCAGCGACGAGGAG AAGCGCCATCTGTACGATACACACGGCATGGCAGCCTTCGATGGCTCTCGCGGTGCCGGCGCCGGCGTCAATCTC GATGATATCCTGTCGCAAATGTTTGGCTTCGACGTCGGTGGCCCCGGCAGACCTCAGCGGCCGCGGAAAGGCCCC AACGACGAGCAGGAATACAAGGTGACGCTGGAGGAGCTCTATAAGGGCAAGACGGTCAAGTTTGTCGCCAACAAA CAAGTCGTCTGCGCTCATTGCAAGGGCTCGGGCGGCAAGGACAAGGCCAAGCCAAACAAGTGTGATCGCTGCAAG GGTAACGGTAAGGTCGAGGCCTTGCGGCAGATCGGGCCTGGTATGATTGGGCGCGAGGCTGTCATTTGTGATCAC TGCCTTGGATCCGGCCAGCTCTTTAAAGATAAAGACCGCTGCAAGAAGTGCAAAGGGAAGCGCACCGTTCAGGAG AAGAAGGCGCTTGAGATGTACATCCCCCGAGGATCTCTACAAGGCGAGCGCATCGTGTTGGAGGGAGAGGCCGAT CAGACGCCCGATCAGACGCCGGGAGACATCATCTTCACCCTGGAAGAGGAGCACCACGAGACATTTTCTCGCATC GGTAACGATCTTTCTGCCGAACTCGACATCACGCTCGGCGAAGCTCTGACGGGTTTCTCCCGCGTCGTTCTCACC CACCTGGACGGGCGAGGCATCTCGATAACGCGACCGCGGGGCAAGATCCTGAGGCCTGGCGACTGTCTGAGGATT GAGGGAGAGGGCATGCCTCTGAAGCGAGGCGAGAGCCGGGGCGACTTGTATCTCGTCGTCAACATCGAATTCCCC GCGGACAACTGGATAAAGGACGATGCGGCGTACGAAGCTCTCAGCAAGATGCTACCCGCCCCGAACTCGCCCATC CGAGCCGACGAGGTGGACGAGGTCGAGTACGAGGAGGGAGCCGACGTGGACAAAATGGGCGAGGACTCTGGAGAC CCGCGCTTCACCGACGAATGGGAGGACGAAGACGGCGAAGAAGAAGTACCGACTCAATGCCAGACGCAATAG |
Gene | >Ophcf2|01755 ATGGCCGCCAATGCGCCTTTTCATGGGGCTGCTGAGGAGCAAGAGGTTGATCTCTACGGTGAGATTGCTTCGGGC TTCGAGTCGTCGCCTCTTTTCTAACATGACATCAAGAGCTGCTGTCTGTCGATAGGAATGCCTCGCAAGAGCAGT TAAAAAAGGCCTATCGCAAGGTCAATACCCCCCCCCCCCATATCTTCCCCATCTTCGTGTCCAGATCGCTCATCA TGCATGTTCTGCTCAGGCCGCCCTTCGCTACCACCCGGACAAGGTCCCGGCCGAGCAACGGCAAGAATCCGAAAT CAAGTTCAAGGAGATGACGAGCGCGTACGAGATTCTCAGCGACGAGGAGAAGCGCCATCTGTACGATACACACGG CATGGCAGCCTTCGATGGCTCTCGCGGTGCCGGCGCCGGCGTCAATCTCGATGATATCCTGTCGCAAATGTTTGG CTTCGACGTCGGTGGCCCCGGCAGACCTCAGCGGCCGCGGAAAGGCCCCAACGACGAGCAGGAATACAAGGTGAC GCTGGAGGAGCTCTATAAGGGCAAGACGGTCAAGTTTGTCGCCAACAAACAAGTCGTCTGCGCTCATTGCAAGGG CTCGGGCGGCAAGGACAAGGCCAAGCCAAACAAGTGTGATCGCTGCAAGGGTAACGGTAAGGTCGAGGCCTTGCG GCAGATCGGGCCTGGTATGATTGGGCGCGAGGCTGTCATTTGTGATCACTGCCTTGGATCCGGCCAGCTCTTTAA AGATAAAGACCGCTGCAAGAAGTGCAAAGGGAAGCGCACCGTTCAGGAGAAGAAGGCGCTTGAGATGTACATCCC CCGAGGATCTCTACAAGGCGAGCGCATCGTGTTGGAGGGAGAGGCCGATCAGACGCCCGATCAGACGCCGGGAGA CATCATCTTCACCCTGGAAGAGGAGCACCACGAGACATTTTCTCGCATCGGTAACGATCTTTCTGCCGAACTCGA CATCACGCTCGGCGAAGCTCTGACGGGTTTCTCCCGCGTCGTTCTCACCCACCTGGACGGGCGAGGCATCTCGAT AACGCGACCGCGGGGCAAGATCCTGAGGCCTGGCGACTGTCTGAGGATTGAGGGAGAGGGCATGCCTCTGAAGCG AGGCGAGAGCCGGGGCGACTTGTATCTCGTCGTCAACATCGAATTCCCCGCGGACAACTGGATAAAGGACGATGC GGCGTACGAAGCTCTCAGCAAGATGCTACCCGCCCCGAACTCGCCCATCCGAGCCGACGAGGTGGACGAGGTCGA GTACGAGGAGGGAGCCGACGTGGACAAAGTCAGTCTTCCTTTTCCTCCTCCTGACTCTTGGGGAACAGCCGCTGA CAGCTTGACATGACAGATGGGCGAGGACTCTGGAGACCCGCGCTTCACCGACGAATGGGAGGACGAAGACGGCGA AGAAGAAGTACCGACTCAATGCCAGACGCAATAG |