Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01753
Gene name
Locationscaffold_02:374162..375977
Strand+
Gene length (bp)1815
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00515 TPR_1 Tetratricopeptide repeat 7.8E-09 37 67
PF07719 TPR_2 Tetratricopeptide repeat 1.4E-06 37 66
PF13424 TPR_12 Tetratricopeptide repeat 3.0E-07 35 97
PF13181 TPR_8 Tetratricopeptide repeat 3.2E-06 37 67
PF13174 TPR_6 Tetratricopeptide repeat 5.6E-02 39 64
PF00564 PB1 PB1 domain 5.4E-08 420 496
PF13176 TPR_7 Tetratricopeptide repeat 7.3E-06 39 68

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01753
MSLKQEIETWVAALNHYDNNEFEEALGEFDKIADTSKILFNMGVIHATLGEHEKAVECYQRAIKLDQYLAVAYFQ
QGVSNFLLGDFEEALANFNDTLLYLRGNNQIDYAQLGLLFKLYSCEVLFNRGLCYIYLQQMDAGMQDLVYAVKEK
VVEDHNVIDEAIGEEAEGYTVFSIPVGVVYRPNDAKVRNLKAKDYLGKARLVAASDRANAFTGFAGSEIRNAGKS
EGKDDRPTDNISFAATNLVRPELQSRRQQSEPSGSRNVFPPTPPPENDRASRNGSIRGGGPQRPPAKLSIPSDVG
SRRYMKSASPQDGRPWPTRSASTSTASRGFPRRPSRMTVDEEDMYPDDLYDMYQGGGGYGSRGSRPSGLARSRYA
DDDDGSDYDDGSLDGAEFEMLSSNRRGPSYRSGSRAQSRRPDIRKIRVKVHAEDVRYVMVGVAIEFPDLVDCIRE
KFNLRRRFKMKVPDEDAPDGDLITLADQDDLEMAIQSVTDTARRQRQDVARLEIWVYEL*
Coding >Ophcf2|01753
ATGTCTCTCAAGCAGGAAATCGAGACATGGGTGGCGGCCCTGAATCATTACGACAACAATGAGTTCGAAGAAGCC
CTCGGCGAATTCGACAAGATCGCCGACACCAGCAAGATTCTCTTCAACATGGGCGTCATTCATGCCACCCTCGGC
GAGCATGAAAAGGCTGTCGAGTGTTACCAGCGAGCAATCAAACTTGATCAGTACCTTGCTGTCGCTTACTTTCAG
CAAGGAGTGTCCAACTTTTTGCTAGGAGACTTCGAGGAGGCGCTCGCCAACTTCAACGACACTCTCTTGTACCTG
CGCGGGAACAACCAAATCGACTATGCTCAGCTGGGACTTCTCTTCAAGCTCTACTCTTGCGAGGTCCTTTTCAAT
CGTGGCCTGTGCTATATCTATCTCCAGCAGATGGACGCCGGCATGCAGGACTTGGTCTATGCTGTCAAGGAAAAG
GTGGTTGAAGATCATAACGTCATTGACGAGGCCATTGGTGAAGAGGCCGAGGGATACACCGTCTTCTCCATCCCG
GTCGGCGTCGTCTATCGCCCCAACGATGCTAAAGTACGGAATCTCAAGGCCAAGGACTATCTGGGCAAGGCGAGA
CTGGTTGCTGCTTCGGATCGGGCCAACGCCTTTACCGGATTCGCCGGCTCTGAAATCAGAAACGCTGGAAAGTCC
GAGGGTAAGGACGATCGGCCGACCGACAACATCTCATTTGCCGCCACAAACCTCGTTAGGCCCGAGCTTCAGTCC
AGGAGACAGCAATCCGAGCCATCCGGTAGCCGCAACGTCTTCCCTCCGACGCCACCGCCCGAGAATGACCGCGCC
AGCCGCAACGGTTCCATCCGGGGGGGAGGACCGCAGAGGCCGCCTGCGAAACTGAGCATCCCCTCGGATGTTGGC
AGTCGGAGGTATATGAAGTCGGCCTCGCCGCAGGATGGTCGGCCGTGGCCGACGAGGTCGGCCTCCACGTCTACT
GCGAGCAGGGGTTTCCCGCGAAGGCCTTCGAGGATGACTGTCGACGAAGAAGACATGTACCCGGATGATCTGTAC
GACATGTATCAGGGAGGCGGAGGTTACGGGTCGAGGGGCAGCCGACCATCCGGTCTGGCGAGATCACGATATGCC
GACGATGACGATGGCTCTGACTACGATGACGGGTCGCTGGACGGGGCTGAGTTCGAGATGCTGTCAAGCAACAGG
CGCGGTCCGTCTTACAGGTCTGGCTCTCGCGCGCAATCGCGGCGGCCCGACATTCGCAAGATCAGAGTCAAGGTA
CACGCCGAGGACGTCCGCTACGTCATGGTCGGTGTTGCCATTGAGTTTCCGGACCTCGTCGATTGTATCCGGGAA
AAGTTCAATCTGCGTCGCAGATTCAAGATGAAGGTTCCGGACGAGGACGCGCCGGACGGTGACCTCATCACATTG
GCGGACCAGGACGATTTAGAAATGGCCATCCAGTCAGTCACGGACACGGCGAGGAGGCAGAGACAGGATGTGGCG
AGGTTGGAGATTTGGGTGTACGAGCTATGA
Transcript >Ophcf2|01753
ATGTCTCTCAAGCAGGAAATCGAGACATGGGTGGCGGCCCTGAATCATTACGACAACAATGAGTTCGAAGAAGCC
CTCGGCGAATTCGACAAGATCGCCGACACCAGCAAGATTCTCTTCAACATGGGCGTCATTCATGCCACCCTCGGC
GAGCATGAAAAGGCTGTCGAGTGTTACCAGCGAGCAATCAAACTTGATCAGTACCTTGCTGTCGCTTACTTTCAG
CAAGGAGTGTCCAACTTTTTGCTAGGAGACTTCGAGGAGGCGCTCGCCAACTTCAACGACACTCTCTTGTACCTG
CGCGGGAACAACCAAATCGACTATGCTCAGCTGGGACTTCTCTTCAAGCTCTACTCTTGCGAGGTCCTTTTCAAT
CGTGGCCTGTGCTATATCTATCTCCAGCAGATGGACGCCGGCATGCAGGACTTGGTCTATGCTGTCAAGGAAAAG
GTGGTTGAAGATCATAACGTCATTGACGAGGCCATTGGTGAAGAGGCCGAGGGATACACCGTCTTCTCCATCCCG
GTCGGCGTCGTCTATCGCCCCAACGATGCTAAAGTACGGAATCTCAAGGCCAAGGACTATCTGGGCAAGGCGAGA
CTGGTTGCTGCTTCGGATCGGGCCAACGCCTTTACCGGATTCGCCGGCTCTGAAATCAGAAACGCTGGAAAGTCC
GAGGGTAAGGACGATCGGCCGACCGACAACATCTCATTTGCCGCCACAAACCTCGTTAGGCCCGAGCTTCAGTCC
AGGAGACAGCAATCCGAGCCATCCGGTAGCCGCAACGTCTTCCCTCCGACGCCACCGCCCGAGAATGACCGCGCC
AGCCGCAACGGTTCCATCCGGGGGGGAGGACCGCAGAGGCCGCCTGCGAAACTGAGCATCCCCTCGGATGTTGGC
AGTCGGAGGTATATGAAGTCGGCCTCGCCGCAGGATGGTCGGCCGTGGCCGACGAGGTCGGCCTCCACGTCTACT
GCGAGCAGGGGTTTCCCGCGAAGGCCTTCGAGGATGACTGTCGACGAAGAAGACATGTACCCGGATGATCTGTAC
GACATGTATCAGGGAGGCGGAGGTTACGGGTCGAGGGGCAGCCGACCATCCGGTCTGGCGAGATCACGATATGCC
GACGATGACGATGGCTCTGACTACGATGACGGGTCGCTGGACGGGGCTGAGTTCGAGATGCTGTCAAGCAACAGG
CGCGGTCCGTCTTACAGGTCTGGCTCTCGCGCGCAATCGCGGCGGCCCGACATTCGCAAGATCAGAGTCAAGGTA
CACGCCGAGGACGTCCGCTACGTCATGGTCGGTGTTGCCATTGAGTTTCCGGACCTCGTCGATTGTATCCGGGAA
AAGTTCAATCTGCGTCGCAGATTCAAGATGAAGGTTCCGGACGAGGACGCGCCGGACGGTGACCTCATCACATTG
GCGGACCAGGACGATTTAGAAATGGCCATCCAGTCAGTCACGGACACGGCGAGGAGGCAGAGACAGGATGTGGCG
AGGTTGGAGATTTGGGTGTACGAGCTATGA
Gene >Ophcf2|01753
ATGTCTCTCAAGCAGGTGAGCATTCTGCTGCCGTACGTCAGCAGAGACGACGATTGACCGGTTCCGGCTAGGAAA
TCGAGACATGGGTGGCGGCCCTGAATCATTACGACAACAATGAGTTCGAAGAAGCCCTCGGCGAATTCGACAAGA
TCGCCGACACCAGCAAGATTCTCTTCAACATGGGCGTCATTCATGCCACCCTCGGCGAGCATGAAAAGGCTGTAA
GACCCTCGTGCCTCTTATCCATGCAAAGCTCAACGCTGATATTTTTGTTCAGGTCGAGTGTTACCAGCGAGCAAT
CAAACTTGATCAGTACCTTGCTGTCGCTTACTTTCAGCAAGGAGTGTCCAACTTTTTGCTAGGAGACTTCGAGGA
GGCGCTCGCCAACTTCAACGACACTCTCTTGTACCTGCGCGGGAACAACCAAATCGACTATGCTCAGCTGGGACT
TCTCTTCAAGCTCTACTCTTGCGAGGTCCTTTTCAATCGTGGCCTGTGCTATATCTATCTCCAGCAGATGGACGC
CGGCATGCAGGACTTGGTCTATGCTGTCAAGGAAAAGGTGGTTGAAGATCATAACGTCATTGACGAGGCCATTGG
TGAAGAGGCCGAGGTGAGTGGCTTTGTTCCCTGCACCGTTCAAGGCCGGATCACTCACAGCCGTGTCTCAGGGAT
ACACCGTCTTCTCCATCCCGGTCGGCGTCGTCTATCGCCCCAACGATGCTAAAGTACGGAATCTCAAGGCCAAGG
ACTATCTGGGCAAGGCGAGACTGGTTGCTGCTTCGGATCGGGCCAACGCCTTTACCGGATTCGCCGGCTCTGAAA
TCAGAAACGTAAGTTCTCGTGGTATCTTGGGCCGATTAACCTCTTTACTCAACCCCAATTCTGTTGATAGGCTGG
AAAGTCCGAGGGTAAGGACGATCGGCCGACCGACAACATCTCATTTGCCGCCACAAACCTCGTTAGGCCCGAGCT
TCAGTCCAGGAGACAGCAATCCGAGCCATCCGGTAGCCGCAACGTCTTCCCTCCGACGCCACCGCCCGAGAATGA
CCGCGCCAGCCGCAACGGTTCCATCCGGGGGGGAGGACCGCAGAGGCCGCCTGCGAAACTGAGCATCCCCTCGGA
TGTTGGCAGTCGGAGGTATATGAAGTCGGCCTCGCCGCAGGATGGTCGGCCGTGGCCGACGAGGTCGGCCTCCAC
GTCTACTGCGAGCAGGGGTTTCCCGCGAAGGCCTTCGAGGATGACTGTCGACGAAGAAGACATGTACCCGGATGA
TCTGTACGACATGTATCAGGGAGGCGGAGGTTACGGGTCGAGGGGCAGCCGACCATCCGGTCTGGCGAGATCACG
ATATGCCGACGATGACGATGGCTCTGACTACGATGACGGGTCGCTGGACGGGGCTGAGTTCGAGATGCTGTCAAG
CAACAGGCGCGGTCCGTCTTACAGGTCTGGCTCTCGCGCGCAATCGCGGCGGCCCGACATTCGCAAGATCAGAGT
CAAGGTACACGCCGAGGACGTCCGCTACGTCATGGTCGGTGTTGCCATTGAGTTTCCGGACCTCGTCGATTGTAT
CCGGGAAAAGTTCAATCTGCGTCGCAGATTCAAGATGAAGGTTCCGGACGAGGACGCGCCGGACGGTGACCTCAT
CACATTGGCGGACCAGGACGATTTAGAAATGGCCATCCAGTCAGTCACGGACACGGCGAGGAGGCAGAGACAGGA
TGTGGCGAGGTTGGAGGTGAGCAAGCCCCCGACTGAGTCTCGTTGCGATTGGGCTAACGGCAGTGGCAGATTTGG
GTGTACGAGCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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