Protein ID | Ophcf2|01687 |
Gene name | |
Location | scaffold_02:154147..155499 |
Strand | + |
Gene length (bp) | 1352 |
Transcript length (bp) | 1155 |
Coding sequence length (bp) | 1155 |
Protein length (aa) | 385 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 3.1E-24 | 35 | 232 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1859 | 0.0814 | 0.8313 | 0.1459 | 0.0964 | 0.1292 | 0.4953 | 0.3746 | 0.382 | 0.0024 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999699 |
Orthofinder run ID | 4 |
Orthogroup | 589 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01687 MAPHRALLLACVATLHVTLSAQAVPENLWKESLMSNSEYVVYRPDKISPHELRAKGGFWPSGPDPGRHVFMPPVN LSLYRHDQDALDPDRRDDWGFISFMSRYPLALNWLQIRSQLPGYIYAVHATPNFVSVDESLRWFAKSRDAQDYAA VGHVGFDQVMAWRRITYDQYSPGNLLIGAVEENSFYNKSRYENEAWSGAEYQLAVFPPQHEVVRDRLQPWCDEEN CQPRSATVAAKAAALRLLASKIAVRSLKLHFRLSQDTLAGTFDSILVRIGESLPITIFKSPDSGWERHLDVDMKY AFGPEPIFLANLTGLRILHRRRRGRIWPDDFKVDGIRLEALTSLSDVPIEVNKFNSMERWVGTREVGVKVVWRKQ ISAEDWKWE* |
Coding | >Ophcf2|01687 ATGGCCCCTCACAGGGCTCTGCTCCTCGCCTGCGTCGCCACCCTGCATGTAACCCTCTCAGCCCAGGCCGTACCC GAGAACCTATGGAAGGAAAGCCTCATGAGCAACTCCGAGTACGTCGTCTACCGCCCAGACAAGATCAGTCCGCAC GAGCTTCGCGCCAAGGGAGGTTTCTGGCCTTCGGGTCCGGATCCCGGTCGTCACGTCTTCATGCCGCCCGTGAAC CTGAGTCTGTACAGACACGATCAGGACGCGCTCGACCCAGACAGACGTGACGATTGGGGCTTCATCTCCTTCATG TCGCGATATCCGCTGGCCCTCAACTGGTTGCAGATCCGGAGCCAACTTCCAGGCTACATCTACGCCGTCCACGCG ACGCCCAACTTTGTCAGCGTGGACGAATCGCTACGCTGGTTCGCAAAGAGTCGTGATGCGCAGGACTATGCTGCT GTGGGACACGTCGGTTTCGATCAGGTCATGGCCTGGCGACGCATAACCTACGATCAGTACTCGCCCGGGAACCTC TTGATCGGGGCTGTGGAAGAGAACTCGTTCTACAACAAGAGCCGGTACGAGAACGAGGCCTGGTCGGGGGCCGAG TATCAGCTCGCCGTCTTCCCTCCCCAACACGAGGTCGTTCGGGACAGGCTTCAGCCGTGGTGCGACGAGGAGAAC TGCCAGCCGCGATCGGCCACCGTGGCGGCCAAGGCAGCGGCCCTGCGGCTTCTGGCCTCCAAGATTGCGGTGCGG AGTTTGAAGCTGCATTTCAGGCTGTCGCAGGATACGCTGGCTGGCACCTTTGACTCCATCCTGGTTCGGATCGGG GAGTCTCTGCCTATTACCATCTTCAAGTCGCCTGATTCCGGGTGGGAGAGGCACCTCGACGTCGACATGAAGTAT GCCTTTGGGCCCGAGCCAATCTTCTTGGCCAACTTGACGGGATTGCGGATTCTGCACCGACGCAGACGTGGCCGT ATCTGGCCGGATGATTTCAAGGTGGACGGGATCCGCCTCGAGGCCCTCACCTCCCTCTCCGACGTCCCCATCGAG GTCAACAAGTTCAACAGTATGGAGCGCTGGGTCGGCACCCGCGAGGTTGGCGTCAAGGTCGTCTGGAGGAAGCAG ATTTCGGCCGAGGACTGGAAGTGGGAGTGA |
Transcript | >Ophcf2|01687 ATGGCCCCTCACAGGGCTCTGCTCCTCGCCTGCGTCGCCACCCTGCATGTAACCCTCTCAGCCCAGGCCGTACCC GAGAACCTATGGAAGGAAAGCCTCATGAGCAACTCCGAGTACGTCGTCTACCGCCCAGACAAGATCAGTCCGCAC GAGCTTCGCGCCAAGGGAGGTTTCTGGCCTTCGGGTCCGGATCCCGGTCGTCACGTCTTCATGCCGCCCGTGAAC CTGAGTCTGTACAGACACGATCAGGACGCGCTCGACCCAGACAGACGTGACGATTGGGGCTTCATCTCCTTCATG TCGCGATATCCGCTGGCCCTCAACTGGTTGCAGATCCGGAGCCAACTTCCAGGCTACATCTACGCCGTCCACGCG ACGCCCAACTTTGTCAGCGTGGACGAATCGCTACGCTGGTTCGCAAAGAGTCGTGATGCGCAGGACTATGCTGCT GTGGGACACGTCGGTTTCGATCAGGTCATGGCCTGGCGACGCATAACCTACGATCAGTACTCGCCCGGGAACCTC TTGATCGGGGCTGTGGAAGAGAACTCGTTCTACAACAAGAGCCGGTACGAGAACGAGGCCTGGTCGGGGGCCGAG TATCAGCTCGCCGTCTTCCCTCCCCAACACGAGGTCGTTCGGGACAGGCTTCAGCCGTGGTGCGACGAGGAGAAC TGCCAGCCGCGATCGGCCACCGTGGCGGCCAAGGCAGCGGCCCTGCGGCTTCTGGCCTCCAAGATTGCGGTGCGG AGTTTGAAGCTGCATTTCAGGCTGTCGCAGGATACGCTGGCTGGCACCTTTGACTCCATCCTGGTTCGGATCGGG GAGTCTCTGCCTATTACCATCTTCAAGTCGCCTGATTCCGGGTGGGAGAGGCACCTCGACGTCGACATGAAGTAT GCCTTTGGGCCCGAGCCAATCTTCTTGGCCAACTTGACGGGATTGCGGATTCTGCACCGACGCAGACGTGGCCGT ATCTGGCCGGATGATTTCAAGGTGGACGGGATCCGCCTCGAGGCCCTCACCTCCCTCTCCGACGTCCCCATCGAG GTCAACAAGTTCAACAGTATGGAGCGCTGGGTCGGCACCCGCGAGGTTGGCGTCAAGGTCGTCTGGAGGAAGCAG ATTTCGGCCGAGGACTGGAAGTGGGAGTGA |
Gene | >Ophcf2|01687 ATGGCCCCTCACAGGGCTCTGCTCCTCGCCTGCGTCGCCACCCTGCATGTAACCCTCTCAGCCCAGGCCGTACCC GAGAACCTATGGAAGGAAAGCCTCATGAGCAACTCCGAGTACGTCGTCTACCGCCCAGACAAGATCAGTCCGCAC GAGCTTCGCGCCAAGGGAGGTTTCTGGCCTTCGGGTCCGGATCCCGGTCGTCACGTCTTCATGCCGCCCGTGAAC CTGAGTCTGTACAGACACGATCAGGACGCGCTCGACCCAGACAGACGTGACGATTGGGGCTTCATCTCCTTCATG TCGCGATATCCGCTGGCCCTCAACTGGTTGCAGATCCGGAGCCAACTTCCAGGCTACATCTACGCCGTCCACGCG ACGCCCAACTTTGTCAGCGTGGACGAATCGCTACGCTGGTTCGCAAAGAGTCGTGATGCGCAGGACTATGCTGCT GTGGGACACGTCGGTTTCGATCAGGTCATGGCCTGGCGACGCATAACCTACGATCAGTACTCGCCCGGGAACCTC TTGATCGGGGCTGTGGAAGAGAACTCGTTCTACAACAAGAGCCGGTACGAGAACGAGGCCTGGTCGGGGGCCGAG TATCAGCTCGCCGTCTTCCCTCCCCAACACGAGGTCGTTCGGGACAGGCTTCAGCCGTGGTGCGACGAGGAGAAC TGCCAGCCGCGATCGGCCACCGTGGCGGCCAAGGCAGCGGCCCTGCGGCTTCTGGCCTCCAAGATTGCGGTGCGG AGTTTGAAGCTGCATTTCAGGCTGTCGCAGGATACGCTGGCTGGCACCTTTGACTCCATCCTGGTTCGGATCGGG GAGTCTCTGCCTATTACCATCTTCAAGTCGCCTGATTCCGGGTGGGAGAGGCACCTCGACGTCGACATGAAGTAT GCCTTTGGGCCCGAGCCAATCTTCTTGGCCAACTTGACGGGATTGCGGATTCTGCACCGACGCAGACGTGGCCGT ATCTGGCCGGATGATTTCAAGGTGGACGGTGCGTCTTGAGTCTCTGTCTCTGTCCACTCTGTCTCATTCGTCTCT CTGTCCCTGTTGTCTCTCTTCAGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCT CCCTCTCTCTCCCTCTCTCTCTCCTCTCGTACGCACACGTGTCTATCTCTCGCAGAGACTGATGTGATTCTGTAG GGATCCGCCTCGAGGCCCTCACCTCCCTCTCCGACGTCCCCATCGAGGTCAACAAGTTCAACAGTATGGAGCGCT GGGTCGGCACCCGCGAGGTTGGCGTCAAGGTCGTCTGGAGGAAGCAGATTTCGGCCGAGGACTGGAAGTGGGAGT GA |