© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01664 |
| Gene name | |
| Location | scaffold_02:99645..101597 |
| Strand | + |
| Gene length (bp) | 1952 |
| Transcript length (bp) | 1641 |
| Coding sequence length (bp) | 1641 |
| Protein length (aa) | 547 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.8E-80 | 56 | 501 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.1E-24 | 60 | 435 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 1.0E-06 | 82 | 241 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 60 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 92 | 111 | 19 |
| 3 | 120 | 139 | 19 |
| 4 | 144 | 166 | 22 |
| 5 | 179 | 201 | 22 |
| 6 | 206 | 228 | 22 |
| 7 | 301 | 323 | 22 |
| 8 | 338 | 360 | 22 |
| 9 | 367 | 389 | 22 |
| 10 | 402 | 424 | 22 |
| 11 | 431 | 453 | 22 |
| 12 | 463 | 485 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01664 MTPKLDLETVEVAHANHVNALISEMDRQLDAAGGPQKGFFHPRFRHPRHFTWLLVAFASMGGLLSGLDQSLISGA NLYLPADLGLSDRENSLVNSGMPLGAVGGALLLSPANEYFGRKGAIIISIVLYTVGAALEAGSFNFAMMVAARVI LGLGVGLEGGTVPVYVAETVERSIRGNLVSLYQFNIALGEVLGYAVAAMFLKVAGNWRFILGSSLLFSTVMFMGM LFLPESPRYLMHKGRKLDSYKVWKRIRGTESSESRLEFFLMAATVEEDGLTGQGDEAKNRRFPWLDFFTVPRARR ALVYANVMVLLGQLTGINAIMYYMSVLMNQIGFDPERANYMSLVGGGSLLVGTIPAIFLMERFGRRFWAVTMLPG FLTGLVLIGVSYQIPLQTHTMAVEACYLTGLIIYMAFFGSYACLTWVIPSEVYPTYLRSYGMTTSDALLFFASFI VTYNFTAMQKVMTRTGLTLGFYGGIALIGELYQILLMPETKNKTLEEIDAVMSRPTLEIARENWAGVRENVRKLL ACRFGDVFLQRQGRSGPMEKE* |
| Coding | >Ophcf2|01664 ATGACGCCCAAACTCGACCTCGAAACCGTCGAAGTCGCCCACGCCAACCATGTAAACGCCCTCATCTCCGAAATG GACCGTCAGCTCGATGCCGCCGGCGGTCCGCAGAAAGGCTTCTTCCATCCTCGCTTCCGCCACCCTCGTCACTTC ACCTGGCTGCTGGTGGCCTTTGCCAGCATGGGCGGTCTTCTCTCAGGGCTGGATCAGAGCCTCATCTCCGGCGCC AACTTGTATCTCCCCGCCGACCTTGGGCTTTCGGATCGGGAGAATAGCCTCGTCAACTCGGGGATGCCGTTGGGG GCGGTGGGGGGCGCGCTCCTGCTCTCGCCGGCGAATGAGTACTTTGGACGCAAGGGGGCCATCATCATCTCCATC GTGCTGTATACCGTCGGGGCAGCTCTTGAGGCGGGCTCCTTTAATTTCGCCATGATGGTGGCCGCCCGCGTCATC CTCGGTCTGGGCGTCGGTCTAGAAGGCGGGACGGTGCCCGTCTATGTAGCCGAGACGGTCGAGCGCAGCATCCGA GGCAACCTGGTGTCCCTCTACCAGTTCAACATTGCCCTGGGCGAGGTTCTCGGATACGCCGTGGCGGCCATGTTC CTCAAGGTGGCTGGCAACTGGCGGTTCATCCTAGGCTCGTCTCTGTTGTTTTCGACGGTCATGTTTATGGGAATG CTTTTCCTTCCCGAGAGCCCGAGATATCTCATGCACAAGGGCAGGAAACTCGACTCTTACAAGGTCTGGAAGCGG ATCCGCGGCACCGAGTCGAGCGAGTCGCGTCTCGAGTTCTTCCTCATGGCTGCTACCGTTGAGGAAGACGGCTTG ACGGGTCAGGGTGATGAGGCCAAGAACCGACGCTTCCCATGGCTCGACTTCTTCACCGTCCCTCGAGCTCGCAGA GCGCTCGTCTACGCCAACGTCATGGTCCTCCTCGGCCAGCTTACCGGCATCAACGCCATCATGTACTACATGTCC GTCCTCATGAACCAGATCGGCTTCGACCCCGAGCGGGCAAACTACATGTCCCTCGTCGGCGGAGGCTCACTCCTC GTCGGCACCATACCGGCCATCTTCTTGATGGAGCGATTCGGACGCCGCTTCTGGGCCGTGACGATGCTTCCCGGA TTCCTGACTGGTCTTGTTCTCATCGGCGTCTCGTATCAGATTCCGCTGCAGACGCATACCATGGCTGTCGAGGCC TGCTATCTCACGGGGCTCATCATCTACATGGCCTTTTTCGGCTCGTACGCCTGTCTGACTTGGGTGATTCCGTCC GAGGTGTATCCAACTTACCTACGCAGCTACGGCATGACCACATCAGACGCCCTCCTCTTCTTCGCCTCCTTCATC GTGACCTACAACTTCACCGCCATGCAAAAAGTCATGACGCGAACAGGCCTCACACTGGGTTTCTACGGCGGCATC GCCCTCATCGGAGAGCTGTACCAGATCCTCCTCATGCCCGAGACGAAGAACAAGACGCTCGAGGAGATTGACGCC GTCATGTCGAGGCCCACGCTCGAAATCGCCCGCGAGAACTGGGCGGGTGTGAGGGAGAATGTGAGGAAACTACTT GCTTGTCGGTTTGGAGACGTCTTTCTACAGCGGCAAGGGAGGTCTGGTCCGATGGAGAAGGAGTAG |
| Transcript | >Ophcf2|01664 ATGACGCCCAAACTCGACCTCGAAACCGTCGAAGTCGCCCACGCCAACCATGTAAACGCCCTCATCTCCGAAATG GACCGTCAGCTCGATGCCGCCGGCGGTCCGCAGAAAGGCTTCTTCCATCCTCGCTTCCGCCACCCTCGTCACTTC ACCTGGCTGCTGGTGGCCTTTGCCAGCATGGGCGGTCTTCTCTCAGGGCTGGATCAGAGCCTCATCTCCGGCGCC AACTTGTATCTCCCCGCCGACCTTGGGCTTTCGGATCGGGAGAATAGCCTCGTCAACTCGGGGATGCCGTTGGGG GCGGTGGGGGGCGCGCTCCTGCTCTCGCCGGCGAATGAGTACTTTGGACGCAAGGGGGCCATCATCATCTCCATC GTGCTGTATACCGTCGGGGCAGCTCTTGAGGCGGGCTCCTTTAATTTCGCCATGATGGTGGCCGCCCGCGTCATC CTCGGTCTGGGCGTCGGTCTAGAAGGCGGGACGGTGCCCGTCTATGTAGCCGAGACGGTCGAGCGCAGCATCCGA GGCAACCTGGTGTCCCTCTACCAGTTCAACATTGCCCTGGGCGAGGTTCTCGGATACGCCGTGGCGGCCATGTTC CTCAAGGTGGCTGGCAACTGGCGGTTCATCCTAGGCTCGTCTCTGTTGTTTTCGACGGTCATGTTTATGGGAATG CTTTTCCTTCCCGAGAGCCCGAGATATCTCATGCACAAGGGCAGGAAACTCGACTCTTACAAGGTCTGGAAGCGG ATCCGCGGCACCGAGTCGAGCGAGTCGCGTCTCGAGTTCTTCCTCATGGCTGCTACCGTTGAGGAAGACGGCTTG ACGGGTCAGGGTGATGAGGCCAAGAACCGACGCTTCCCATGGCTCGACTTCTTCACCGTCCCTCGAGCTCGCAGA GCGCTCGTCTACGCCAACGTCATGGTCCTCCTCGGCCAGCTTACCGGCATCAACGCCATCATGTACTACATGTCC GTCCTCATGAACCAGATCGGCTTCGACCCCGAGCGGGCAAACTACATGTCCCTCGTCGGCGGAGGCTCACTCCTC GTCGGCACCATACCGGCCATCTTCTTGATGGAGCGATTCGGACGCCGCTTCTGGGCCGTGACGATGCTTCCCGGA TTCCTGACTGGTCTTGTTCTCATCGGCGTCTCGTATCAGATTCCGCTGCAGACGCATACCATGGCTGTCGAGGCC TGCTATCTCACGGGGCTCATCATCTACATGGCCTTTTTCGGCTCGTACGCCTGTCTGACTTGGGTGATTCCGTCC GAGGTGTATCCAACTTACCTACGCAGCTACGGCATGACCACATCAGACGCCCTCCTCTTCTTCGCCTCCTTCATC GTGACCTACAACTTCACCGCCATGCAAAAAGTCATGACGCGAACAGGCCTCACACTGGGTTTCTACGGCGGCATC GCCCTCATCGGAGAGCTGTACCAGATCCTCCTCATGCCCGAGACGAAGAACAAGACGCTCGAGGAGATTGACGCC GTCATGTCGAGGCCCACGCTCGAAATCGCCCGCGAGAACTGGGCGGGTGTGAGGGAGAATGTGAGGAAACTACTT GCTTGTCGGTTTGGAGACGTCTTTCTACAGCGGCAAGGGAGGTCTGGTCCGATGGAGAAGGAGTAG |
| Gene | >Ophcf2|01664 ATGACGCCCAAACTCGACCTCGAAACCGTCGAAGTCGCCCACGCCAACCATGTAAACGCCCTCATCTCCGAAATG GACCGTCAGCTCGATGCCGCCGGCGGTCCGCAGAAAGGCTTCTTCCATCCTCGCTTCCGCCACCCTCGTCACTTC ACCTGGCTGCTGGTGGCCTTTGCCAGCATGGGCGGTCTTCTCTCAGGGCTGGATCAGAGCCTCATCTCCGGCGCC AACTTGTATCTCCCCGCCGACCTTGGGCTTTCGGATCGGGAGAATAGCCTCGTCAACTCGGGGATGCCGTTGGGG GCGGTGGGGGGCGCGCTCCTGCTCTCGCCGGCGAATGAGTACTTTGGACGCAAGGGGGCCATCATCATCTCCATC GTGCTGTATACCGTCGGGGCAGCTCTTGAGGCGGGCTCCTTTAATTTCGGCGAGTTGTTTCCCCCCTATTTATAT ATATAGTTGACTGTCTGACCGCTTGTGGATAAAAAAAAGCCATGATGGTGGCCGCCCGCGTCATCCTCGGTCTGG GCGTCGGTCTAGAAGGCGGGACGGTGCCCGTCTATGTAGCCGAGACGGTCGAGCGCAGCATCCGAGGCAACCTGG TGTCCCTCTACCAGTTCAACATTGCCCTGGGCGAGGTTCTCGGATACGCCGTGGCGGCCATGTTCCTCAAGGTGG CTGGCAACTGGCGGTTCATCCTAGGCTCGTCTCTGTTGTTTTCGACGGTCATGTTTATGGGGTAAGATGCATCAT GTTCGCTCGGCTTTTTGAGTTGACCTCGTTTAGAATGCTTTTCCTTCCCGAGAGCCCGAGATATCTCATGCACAA GGGCAGGAAACTCGACTCTTACAAGGTCTGGAAGCGGATCCGCGGCACCGAGTCGAGCGAGTCGCGTCTCGAGTT CTTCCTCATGGCTGCTACCGTTGAGGAAGACGGCTTGACGGGTCAGGGTGATGAGGCCAAGAACCGACGCTTCCC ATGGCTCGACTTCTTCACGTACGTTGCATCTTGACTTTCCATTCAATATGACACCAATGACTTACTTAGATTCCT TTTCTTCGTACCGTACATACGTGTAGCGTCCCTCGAGCTCGCAGAGCGCTCGTCTACGCCAACGTCATGGTCCTC CTCGGCCAGCTTACCGGCATCAACGCCATCATGTACTACATGTCCGTCCTCATGAACCAGATCGGCTTCGACCCC GAGCGGGCAAACTACATGTCCCTCGTCGGCGGAGGCTCACTCCTCGTCGGCACCATACCGGCCATCTTCTTGATG GAGCGATTCGGACGCCGCTTCTGGGCCGTGACGATGCTTCCCGGATTCCTGACTGGTCTTGTTCTCATCGGCGTC TCGTATCAGATTCCGCTGCAGACGCATACCATGGCTGTCGAGGCCTGCTATCTCACGGGGCTCATCATCTACATG GCCTTTTTCGGCTCGTACGCCTGTCTGACTTGGGGTGAGCTCTTGAACTCCCGAGCTTCTTGAACTGCCGAGCTC TTGAACTTCTGAGCTCTTGAACTCCTGACCGCTCGAAGGGGTGGTGTGTCATCGGAATCGAGCTGATTCTCGCAG TGATTCCGTCCGAGGTGTATCCAACTTACCTACGCAGCTACGGCATGACCACATCAGACGCCCTCCTCTTCTTCG CCTCCTTCATCGTGACCTACAACTTCACCGCCATGCAAAAAGTCATGACGCGAACAGGCCTCACACTGGGTTTCT ACGGCGGCATCGCCCTCATCGGAGAGCTGTACCAGATCCTCCTCATGCCCGAGACGAAGAACAAGACGCTCGAGG AGATTGACGCCGTCATGTCGAGGCCCACGCTCGAAATCGCCCGCGAGAACTGGGCGGGTGTGAGGGAGAATGTGA GGAAACTACTTGCTTGTCGGTTTGGAGACGTCTTTCTACAGCGGCAAGGGAGGTCTGGTCCGATGGAGAAGGAGT AG |