Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01661
Gene name
Locationscaffold_02:89454..90491
Strand+
Gene length (bp)1037
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 134 151 17
2 156 178 22
3 219 241 22
4 251 273 22
5 280 299 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01661
MSNLYGSANPPYGTAAAQNLQFYPSSYAPTGPASHQVQQPTYGYGAGSSAPAVNAPGGGAHSASGPGFGVSGRMG
EQAGLRTGWLAAFSTEGYDGEPPLWEELGVNFGHIQKKTLAVLNPFRHIDQHLMDDNDLAGSILFFILFGFFLLF
SGKVHFGYIYGLALLGSTSLHFILSLMSPAEPQHASPSSSSAYHPQYSSDPSSQAGLQQGGHFSSTLTFARSASV
LGYCLLPLVATSLLGVGMPMDTPLGIVLTSAAIVWSTYSASGMFCAVGRMKGMRGLVAYPLALFYVGFGIIGIFS
SRGSGSLANAAAKLNS*
Coding >Ophcf2|01661
ATGTCAAACCTCTACGGAAGCGCCAACCCCCCCTACGGCACCGCCGCCGCTCAAAACCTCCAATTCTACCCATCG
TCGTACGCGCCCACCGGCCCAGCCTCGCACCAGGTACAACAACCGACGTATGGGTACGGAGCGGGCTCCTCCGCC
CCGGCCGTCAACGCGCCGGGCGGCGGGGCACACTCTGCCTCTGGCCCTGGCTTCGGCGTCTCGGGGAGGATGGGC
GAGCAGGCTGGGCTGAGGACTGGATGGTTGGCGGCTTTTTCTACTGAGGGGTATGATGGGGAGCCTCCGCTGTGG
GAGGAGCTTGGCGTCAACTTTGGCCATATTCAGAAAAAGACATTAGCCGTCCTCAACCCCTTCCGCCACATCGAC
CAACACCTCATGGACGACAACGACCTCGCCGGCTCCATCCTCTTCTTCATCCTCTTCGGCTTCTTCCTTCTCTTC
TCAGGAAAGGTCCATTTCGGCTACATCTACGGCCTCGCTCTCCTAGGCTCCACATCGCTACACTTCATCCTCTCG
CTCATGTCCCCCGCCGAACCACAGCACGCCTCCCCCTCCTCCTCATCCGCCTACCACCCGCAGTACAGCAGCGAC
CCTTCATCGCAGGCAGGTCTGCAGCAAGGTGGCCACTTCTCCTCCACGCTCACCTTCGCCCGTTCCGCTTCCGTC
CTCGGCTATTGCCTCCTCCCCCTCGTGGCCACCAGCCTCCTGGGCGTCGGCATGCCCATGGACACGCCCCTCGGC
ATCGTCCTCACCAGCGCCGCCATCGTTTGGTCCACCTACAGCGCCAGCGGCATGTTCTGTGCCGTCGGCAGGATG
AAGGGCATGCGCGGCCTCGTGGCCTACCCCCTCGCCCTCTTCTACGTCGGCTTCGGCATCATCGGCATATTCAGC
AGCCGCGGTAGCGGATCCCTCGCAAACGCCGCCGCCAAACTGAATAGTTGA
Transcript >Ophcf2|01661
ATGTCAAACCTCTACGGAAGCGCCAACCCCCCCTACGGCACCGCCGCCGCTCAAAACCTCCAATTCTACCCATCG
TCGTACGCGCCCACCGGCCCAGCCTCGCACCAGGTACAACAACCGACGTATGGGTACGGAGCGGGCTCCTCCGCC
CCGGCCGTCAACGCGCCGGGCGGCGGGGCACACTCTGCCTCTGGCCCTGGCTTCGGCGTCTCGGGGAGGATGGGC
GAGCAGGCTGGGCTGAGGACTGGATGGTTGGCGGCTTTTTCTACTGAGGGGTATGATGGGGAGCCTCCGCTGTGG
GAGGAGCTTGGCGTCAACTTTGGCCATATTCAGAAAAAGACATTAGCCGTCCTCAACCCCTTCCGCCACATCGAC
CAACACCTCATGGACGACAACGACCTCGCCGGCTCCATCCTCTTCTTCATCCTCTTCGGCTTCTTCCTTCTCTTC
TCAGGAAAGGTCCATTTCGGCTACATCTACGGCCTCGCTCTCCTAGGCTCCACATCGCTACACTTCATCCTCTCG
CTCATGTCCCCCGCCGAACCACAGCACGCCTCCCCCTCCTCCTCATCCGCCTACCACCCGCAGTACAGCAGCGAC
CCTTCATCGCAGGCAGGTCTGCAGCAAGGTGGCCACTTCTCCTCCACGCTCACCTTCGCCCGTTCCGCTTCCGTC
CTCGGCTATTGCCTCCTCCCCCTCGTGGCCACCAGCCTCCTGGGCGTCGGCATGCCCATGGACACGCCCCTCGGC
ATCGTCCTCACCAGCGCCGCCATCGTTTGGTCCACCTACAGCGCCAGCGGCATGTTCTGTGCCGTCGGCAGGATG
AAGGGCATGCGCGGCCTCGTGGCCTACCCCCTCGCCCTCTTCTACGTCGGCTTCGGCATCATCGGCATATTCAGC
AGCCGCGGTAGCGGATCCCTCGCAAACGCCGCCGCCAAACTGAATAGTTGA
Gene >Ophcf2|01661
ATGTCAAACCTCTACGGAAGCGCCAACCCCCCCTACGGCACCGCCGCCGCTCAAAACCTCCAATTCTACCCATCG
TCGTACGCGCCCACCGGCCCAGCCTCGCACCAGGTACAACAACCGACGTATGGGTACGGAGCGGGCTCCTCCGCC
CCGGCCGTCAACGCGCCGGGCGGCGGGGCACACTCTGCCTCTGGCCCTGGCTTCGGCGTCTCGGGGAGGATGGGC
GAGCAGGCTGGGCTGAGGACTGGATGGTTGGCGGCTTTTTCTACTGAGGGGTATGATGGGGAGCCTCCGCTGTGG
GAGGAGCTTGGCGTCAACTTTGGCCATATTCAGAAAAAGGTGCGTTTTCCCCCATCTTCTTGTTACCCTAGCATC
TTCTCTTTCACCTGGCTAATAAGCCCCCCCCCCCCCCCCCCCTCCAAAAGACATTAGCCGTCCTCAACCCCTTCC
GCCACATCGACCAACACCTCATGGACGACAACGACCTCGCCGGCTCCATCCTCTTCTTCATCCTCTTCGGCTTCT
TCCTTCTCTTCTCAGGAAAGGTCCATTTCGGCTACATCTACGGCCTCGCTCTCCTAGGCTCCACATCGCTACACT
TCATCCTCTCGCTCATGTCCCCCGCCGAACCACAGCACGCCTCCCCCTCCTCCTCATCCGCCTACCACCCGCAGT
ACAGCAGCGACCCTTCATCGCAGGCAGGTCTGCAGCAAGGTGGCCACTTCTCCTCCACGCTCACCTTCGCCCGTT
CCGCTTCCGTCCTCGGCTATTGCCTCCTCCCCCTCGTGGCCACCAGCCTCCTGGGCGTCGGCATGCCCATGGACA
CGCCCCTCGGCATCGTCCTCACCAGCGCCGCCATCGTTTGGTCCACCTACAGCGCCAGCGGCATGTTCTGTGCCG
TCGGCAGGATGAAGGGCATGCGCGGCCTCGTGGCCTACCCCCTCGCCCTCTTCTACGTCGGCTTCGGCATCATCG
GCATATTCAGCAGCCGCGGTAGCGGATCCCTCGCAAACGCCGCCGCCAAACTGAATAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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