Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01608
Gene name
Locationscaffold_01:5476793..5477885
Strand+
Gene length (bp)1092
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 6.0E-08 161 204

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01608
MVSLFRICLLIALAFSIYHVFPPLILFGEWLSQNHPFSNQRAVEQDFTPTPKELACLHGLPLPGTLATTTEQTPI
PNVVNFVFFQQLPSSKPEGDFGFLAYLAVRSAIVSLKPDHVYIHYGFASSPSRFGRVSQAPLGESIIMRNPWIRR
LRPHVELKPYTKPFDRSLKHREHLADRVRLEILLQHGGIYMDLDAFALRPFAEALSPSPPHDAILGYEGGNRAGL
CNAVIAARPNSSFIHRWLHTYDKADLNAEWNYHSVILPRQLAHNHPDEVCELPPDAFFWPTWTWGDVRWMHEPLS
PPDAEFWKGRIQELGGSLFPNQLVYHAWSQMSRNRYLKRLRPDVIRAENTRFNLLMRRFLEDD*
Coding >Ophcf2|01608
ATGGTCTCCCTCTTCCGCATCTGCCTCCTCATCGCCCTCGCCTTCTCCATCTACCACGTCTTCCCACCACTCATC
CTCTTCGGCGAATGGCTATCACAGAACCATCCCTTCTCCAACCAAAGAGCCGTCGAGCAAGACTTCACCCCGACA
CCCAAGGAACTCGCCTGCCTGCACGGCCTGCCTCTTCCCGGAACCCTCGCGACGACCACAGAACAGACGCCGATA
CCAAACGTCGTCAACTTCGTCTTCTTCCAGCAGCTCCCTTCCAGCAAGCCAGAGGGAGACTTTGGCTTCCTCGCC
TACCTCGCCGTCCGGAGCGCCATAGTCTCCCTGAAGCCCGACCATGTCTACATCCACTACGGCTTTGCCTCCTCG
CCTTCGCGCTTCGGTCGTGTCTCTCAGGCGCCGCTCGGCGAGAGCATCATCATGCGCAATCCCTGGATCCGACGA
CTGAGGCCGCATGTCGAGCTGAAGCCATACACGAAGCCCTTTGATCGCTCCCTCAAGCATAGAGAGCACCTCGCC
GACCGCGTTCGACTCGAGATTTTACTCCAACACGGCGGCATCTACATGGATCTGGACGCCTTTGCCCTCCGGCCT
TTTGCAGAAGCGCTCTCGCCCTCGCCGCCTCACGATGCTATCCTCGGTTATGAAGGCGGTAACCGCGCCGGTCTA
TGCAACGCCGTCATCGCCGCTCGACCAAACAGCTCCTTTATCCATCGCTGGCTTCACACGTATGACAAGGCCGAC
CTCAACGCCGAGTGGAACTACCACAGCGTTATCCTCCCGCGCCAGCTCGCCCACAATCACCCAGACGAAGTCTGC
GAGCTGCCTCCCGATGCCTTCTTCTGGCCGACCTGGACATGGGGCGACGTTCGGTGGATGCATGAGCCCCTGAGC
CCGCCGGATGCCGAGTTCTGGAAGGGCCGAATACAGGAGTTGGGCGGTAGCTTGTTCCCGAATCAGCTCGTCTAT
CATGCCTGGAGCCAGATGAGCAGGAACCGCTATCTGAAACGCCTGAGGCCGGATGTCATCCGTGCGGAAAACACG
AGGTTCAATCTGCTTATGAGACGTTTTCTGGAGGATGACTGA
Transcript >Ophcf2|01608
ATGGTCTCCCTCTTCCGCATCTGCCTCCTCATCGCCCTCGCCTTCTCCATCTACCACGTCTTCCCACCACTCATC
CTCTTCGGCGAATGGCTATCACAGAACCATCCCTTCTCCAACCAAAGAGCCGTCGAGCAAGACTTCACCCCGACA
CCCAAGGAACTCGCCTGCCTGCACGGCCTGCCTCTTCCCGGAACCCTCGCGACGACCACAGAACAGACGCCGATA
CCAAACGTCGTCAACTTCGTCTTCTTCCAGCAGCTCCCTTCCAGCAAGCCAGAGGGAGACTTTGGCTTCCTCGCC
TACCTCGCCGTCCGGAGCGCCATAGTCTCCCTGAAGCCCGACCATGTCTACATCCACTACGGCTTTGCCTCCTCG
CCTTCGCGCTTCGGTCGTGTCTCTCAGGCGCCGCTCGGCGAGAGCATCATCATGCGCAATCCCTGGATCCGACGA
CTGAGGCCGCATGTCGAGCTGAAGCCATACACGAAGCCCTTTGATCGCTCCCTCAAGCATAGAGAGCACCTCGCC
GACCGCGTTCGACTCGAGATTTTACTCCAACACGGCGGCATCTACATGGATCTGGACGCCTTTGCCCTCCGGCCT
TTTGCAGAAGCGCTCTCGCCCTCGCCGCCTCACGATGCTATCCTCGGTTATGAAGGCGGTAACCGCGCCGGTCTA
TGCAACGCCGTCATCGCCGCTCGACCAAACAGCTCCTTTATCCATCGCTGGCTTCACACGTATGACAAGGCCGAC
CTCAACGCCGAGTGGAACTACCACAGCGTTATCCTCCCGCGCCAGCTCGCCCACAATCACCCAGACGAAGTCTGC
GAGCTGCCTCCCGATGCCTTCTTCTGGCCGACCTGGACATGGGGCGACGTTCGGTGGATGCATGAGCCCCTGAGC
CCGCCGGATGCCGAGTTCTGGAAGGGCCGAATACAGGAGTTGGGCGGTAGCTTGTTCCCGAATCAGCTCGTCTAT
CATGCCTGGAGCCAGATGAGCAGGAACCGCTATCTGAAACGCCTGAGGCCGGATGTCATCCGTGCGGAAAACACG
AGGTTCAATCTGCTTATGAGACGTTTTCTGGAGGATGACTGA
Gene >Ophcf2|01608
ATGGTCTCCCTCTTCCGCATCTGCCTCCTCATCGCCCTCGCCTTCTCCATCTACCACGTCTTCCCACCACTCATC
CTCTTCGGCGAATGGCTATCACAGAACCATCCCTTCTCCAACCAAAGAGCCGTCGAGCAAGACTTCACCCCGACA
CCCAAGGAACTCGCCTGCCTGCACGGCCTGCCTCTTCCCGGAACCCTCGCGACGACCACAGAACAGACGCCGATA
CCAAACGTCGTCAACTTCGTCTTCTTCCAGCAGCTCCCTTCCAGCAAGCCAGAGGGAGACTTTGGCTTCCTCGCC
TACCTCGCCGTCCGGAGCGCCATAGTCTCCCTGAAGCCCGACCATGTCTACATCCACTACGGCTTTGCCTCCTCG
CCTTCGCGCTTCGGTCGTGTCTCTCAGGCGCCGCTCGGCGAGAGCATCATCATGCGCAATCCCTGGATCCGACGA
CTGAGGCCGCATGTCGAGCTGAAGCCATACACGAAGCCCTTTGATCGCTCCCTCAAGCATAGAGAGCACCTCGCC
GACCGCGTTCGACTCGAGATTTTACTCCAACACGGCGGCATCTACATGGATCTGGACGCCTTTGCCCTCCGGCCT
TTTGCAGAAGCGCTCTCGCCCTCGCCGCCTCACGATGCTATCCTCGGTTATGAAGGCGGTAACCGCGCCGGTCTA
TGCAACGCCGTCATCGCCGCTCGACCAAACAGCTCCTTTATCCATCGCTGGCTTCACACGTATGACAAGGCCGAC
CTCAACGCCGAGTGGAACTACCACAGCGTTATCCTCCCGCGCCAGCTCGCCCACAATCACCCAGACGAAGTCTGC
GAGCTGCCTCCCGATGCCTTCTTCTGGCCGACCTGGACATGGGGCGACGTTCGGTGGATGCATGAGCCCCTGAGC
CCGCCGGATGCCGAGTTCTGGAAGGGCCGAATACAGGAGTTGGGCGGTAGCTTGTTCCCGAATCAGCTCGTCTAT
CATGCCTGGAGCCAGATGAGCAGGAACCGCTATCTGAAACGCCTGAGGCCGGATGTCATCCGTGCGGAAAACACG
AGGTTCAATCTGCTTATGAGACGTTTTCTGGAGGATGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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