Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01597
Gene name
Locationscaffold_01:5451833..5452826
Strand+
Gene length (bp)993
Transcript length (bp)819
Coding sequence length (bp)819
Protein length (aa) 273

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22
2 73 95 22
3 110 132 22
4 144 166 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01597
MAGHFAPDQQLCRRYAGFAADLQRGHFLVLYWIMFIGNLSILFFASWIYIKAQEALELHPGRSRMRLKALRKALF
ADLLCVAVSTVVVIMEAFALLALQFCDGEDLMSLYWSTWTMIQVGALIAMSGIVLALVHSLRDSKHPPWALAMGT
PVLVIAGVLHLFHQVTKKNINKIRRKASSSASASPSTSKESEMSNDMEESVERVDDAEPEWDSEKGLQAEVIGST
TDGGMIVRFLTTQPGWASKGGQLLGKTEDERPIVAFAKGVVTFEAEP*
Coding >Ophcf2|01597
ATGGCTGGCCACTTCGCCCCAGACCAGCAACTATGCCGGCGGTACGCAGGATTCGCCGCCGACCTACAACGGGGG
CATTTCCTAGTTCTCTACTGGATCATGTTCATCGGAAACCTGTCCATCCTCTTCTTCGCTTCGTGGATATACATT
AAGGCACAGGAGGCTCTGGAACTACATCCAGGCCGGTCGCGGATGCGGTTGAAAGCCTTGCGAAAAGCCCTCTTC
GCCGATCTCTTGTGTGTCGCCGTGTCGACCGTCGTCGTCATAATGGAGGCCTTTGCGCTGTTGGCGCTGCAGTTC
TGCGACGGCGAAGACCTCATGTCTCTCTACTGGTCCACCTGGACGATGATACAGGTCGGGGCGTTGATTGCCATG
TCTGGAATTGTACTCGCCCTCGTACATTCGCTTCGGGACAGCAAGCATCCGCCGTGGGCGCTCGCCATGGGAACT
CCAGTCCTCGTCATTGCGGGAGTTTTGCACCTATTTCATCAAGTCACCAAGAAGAATATCAACAAGATACGGCGC
AAAGCCTCGTCTTCGGCCTCGGCCTCGCCCTCAACCTCCAAGGAGTCGGAAATGAGCAACGACATGGAGGAATCC
GTGGAAAGAGTCGACGATGCTGAGCCTGAGTGGGATTCTGAAAAGGGGCTTCAGGCCGAAGTCATTGGCTCGACC
ACTGACGGAGGCATGATTGTGCGCTTCCTCACGACGCAGCCCGGCTGGGCTTCCAAGGGCGGCCAGCTGCTGGGG
AAAACGGAGGATGAGCGGCCAATCGTGGCGTTTGCCAAGGGCGTCGTCACGTTTGAAGCCGAACCGTGA
Transcript >Ophcf2|01597
ATGGCTGGCCACTTCGCCCCAGACCAGCAACTATGCCGGCGGTACGCAGGATTCGCCGCCGACCTACAACGGGGG
CATTTCCTAGTTCTCTACTGGATCATGTTCATCGGAAACCTGTCCATCCTCTTCTTCGCTTCGTGGATATACATT
AAGGCACAGGAGGCTCTGGAACTACATCCAGGCCGGTCGCGGATGCGGTTGAAAGCCTTGCGAAAAGCCCTCTTC
GCCGATCTCTTGTGTGTCGCCGTGTCGACCGTCGTCGTCATAATGGAGGCCTTTGCGCTGTTGGCGCTGCAGTTC
TGCGACGGCGAAGACCTCATGTCTCTCTACTGGTCCACCTGGACGATGATACAGGTCGGGGCGTTGATTGCCATG
TCTGGAATTGTACTCGCCCTCGTACATTCGCTTCGGGACAGCAAGCATCCGCCGTGGGCGCTCGCCATGGGAACT
CCAGTCCTCGTCATTGCGGGAGTTTTGCACCTATTTCATCAAGTCACCAAGAAGAATATCAACAAGATACGGCGC
AAAGCCTCGTCTTCGGCCTCGGCCTCGCCCTCAACCTCCAAGGAGTCGGAAATGAGCAACGACATGGAGGAATCC
GTGGAAAGAGTCGACGATGCTGAGCCTGAGTGGGATTCTGAAAAGGGGCTTCAGGCCGAAGTCATTGGCTCGACC
ACTGACGGAGGCATGATTGTGCGCTTCCTCACGACGCAGCCCGGCTGGGCTTCCAAGGGCGGCCAGCTGCTGGGG
AAAACGGAGGATGAGCGGCCAATCGTGGCGTTTGCCAAGGGCGTCGTCACGTTTGAAGCCGAACCGTGA
Gene >Ophcf2|01597
ATGGCTGGCCACTTCGCCCCAGACCAGCAACTATGCCGGCGGTACGCAGGATTCGCCGCCGACCTACAACGGGGG
CATTTCCTAGTTCTCTACTGGATCATGTTCATCGGAAACCTGTCCATCCTCTTCTTCGCTTCGTGGATATACATT
AAGTAGGTCATCTGGAAACGGGTTTGTCGTTCAAATTTTCAGCCACTGACATGGGAACAGGGCACAGGAGGCTCT
GGAACTACATCCAGGCCGGTCGCGGATGCGGTTGAAAGCCTTGCGAAAAGCCCTCTTCGCCGATCTCTTGTGTGT
CGCCGTGTCGACCGTCGTCGTCATAATGGAGGCCTTTGCGCTGTTGGCGCTGCAGTTCTGCGACGGCGAAGACCT
CATGTCTCTCTACTGGTCCACCTGGACGATGATACAGGTCGGGGCGTTGATTGCCATGTCTGGAATTGTACTCGC
CCTCGTACATTCGCTTCGGGACAGCAAGCATCCGTGAGTCGCGTGGACACTGGGTGTGCCTTGACAACAACTCAC
ATTCCTCACAGGCCGTGGGCGCTCGCCATGGGAACTCCAGTCCTCGTCATTGCGGGAGTTTTGCACCTATTTCAT
CAAGTCACCAAGAAGAATATCAACAAGATACGGCGCAAAGCCTCGTCTTCGGCCTCGGCCTCGCCCTCAACCTCC
AAGGAGTCGGAAATGAGCAACGACATGGAGTTAGTGAATGATAGAAAAACAACTTTCCAAGAGTAACATGTAGTG
CTAACTTACTTTTGCAGGGAATCCGTGGAAAGAGTCGACGATGCTGAGCCTGAGTGGGATTCTGAAAAGGGGCTT
CAGGCCGAAGTCATTGGCTCGACCACTGACGGAGGCATGATTGTGCGCTTCCTCACGACGCAGCCCGGCTGGGCT
TCCAAGGGCGGCCAGCTGCTGGGGAAAACGGAGGATGAGCGGCCAATCGTGGCGTTTGCCAAGGGCGTCGTCACG
TTTGAAGCCGAACCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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