Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01585
Gene name
Locationscaffold_01:5409815..5410895
Strand+
Gene length (bp)1080
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08240 ADH_N Alcohol dehydrogenase GroES-like domain 9.8E-24 34 144
PF00107 ADH_zinc_N Zinc-binding dehydrogenase 6.5E-16 189 313

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01585
MGYPDTFTGFCVSSPETWNQFHKAELKPKPFGEHDIDVEIEACGVCGSDVHSVTGGWGKFEGPLCVGHEIVGRAV
RVGSHVREIKKGDRVGVGAQVWSCLECGLCRDGNENYCPKLVDTYNAQYPDGSWAHGGFASHVRAHEYFTFAIPE
GMESHVVAPLLCAGITTYSPLVRAKVGPGKRVGVLGIGGLGHIGLQFAVALGAETFALTHSADKADDCRELGAKE
VILTEKKGWEEPWKFSFDFILNCADVTDRFDLPTYLSLLKPGGEFHNVGLPDEPLPELKAQVYAVNAPKMTGSHL
GNHQEMVDLLRLAVEKGVKPWVESIEVGEKGCREAVERLREDRVRYRFSLTGFDAAFGR*
Coding >Ophcf2|01585
ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG
CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG
CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT
CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC
GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG
GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG
GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG
GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC
TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG
GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC
GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA
CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG
GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC
GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG
ACGGGGTTTGATGCCGCTTTTGGGAGGTGA
Transcript >Ophcf2|01585
ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG
CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG
CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT
CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC
GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG
GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG
GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG
GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC
TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG
GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC
GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA
CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG
GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC
GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG
ACGGGGTTTGATGCCGCTTTTGGGAGGTGA
Gene >Ophcf2|01585
ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG
CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG
CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT
CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC
GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG
GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG
GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG
GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC
TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG
GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC
GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA
CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG
GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC
GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG
ACGGGGTTTGATGCCGCTTTTGGGAGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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