Protein ID | Ophcf2|01585 |
Gene name | |
Location | scaffold_01:5409815..5410895 |
Strand | + |
Gene length (bp) | 1080 |
Transcript length (bp) | 1080 |
Coding sequence length (bp) | 1080 |
Protein length (aa) | 360 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08240 | ADH_N | Alcohol dehydrogenase GroES-like domain | 9.8E-24 | 34 | 144 |
PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 6.5E-16 | 189 | 313 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01585 MGYPDTFTGFCVSSPETWNQFHKAELKPKPFGEHDIDVEIEACGVCGSDVHSVTGGWGKFEGPLCVGHEIVGRAV RVGSHVREIKKGDRVGVGAQVWSCLECGLCRDGNENYCPKLVDTYNAQYPDGSWAHGGFASHVRAHEYFTFAIPE GMESHVVAPLLCAGITTYSPLVRAKVGPGKRVGVLGIGGLGHIGLQFAVALGAETFALTHSADKADDCRELGAKE VILTEKKGWEEPWKFSFDFILNCADVTDRFDLPTYLSLLKPGGEFHNVGLPDEPLPELKAQVYAVNAPKMTGSHL GNHQEMVDLLRLAVEKGVKPWVESIEVGEKGCREAVERLREDRVRYRFSLTGFDAAFGR* |
Coding | >Ophcf2|01585 ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG ACGGGGTTTGATGCCGCTTTTGGGAGGTGA |
Transcript | >Ophcf2|01585 ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG ACGGGGTTTGATGCCGCTTTTGGGAGGTGA |
Gene | >Ophcf2|01585 ATGGGCTACCCCGACACCTTCACCGGCTTCTGCGTCTCCAGCCCGGAGACGTGGAACCAATTCCACAAGGCGGAG CTCAAGCCCAAGCCCTTTGGCGAGCACGACATCGACGTCGAGATCGAGGCCTGCGGCGTGTGCGGCTCCGACGTG CACAGCGTCACGGGCGGATGGGGCAAGTTCGAGGGCCCTCTTTGCGTGGGCCACGAGATTGTCGGTCGGGCCGTT CGCGTGGGATCGCACGTGCGGGAGATTAAGAAGGGGGATAGGGTGGGTGTTGGTGCGCAGGTCTGGTCGTGTCTC GAGTGTGGGCTTTGTCGGGACGGTAACGAGAATTACTGTCCGAAGCTGGTCGATACGTATAACGCTCAGTATCCG GATGGGTCGTGGGCTCATGGGGGGTTCGCCTCTCATGTCAGGGCTCACGAGTACTTCACCTTTGCCATTCCGGAG GGGATGGAGAGTCATGTTGTCGCTCCGTTGCTGTGCGCGGGAATCACTACTTATTCGCCCTTGGTGAGGGCCAAG GTCGGGCCCGGGAAGAGGGTTGGGGTCTTGGGGATAGGGGGGTTGGGGCATATCGGCTTGCAGTTTGCCGTCGCC TTGGGGGCGGAGACGTTTGCCCTGACGCATTCTGCCGACAAGGCTGATGATTGCCGTGAGTTGGGGGCCAAGGAG GTGATTCTCACGGAGAAGAAGGGATGGGAGGAGCCGTGGAAGTTTTCCTTCGACTTCATCCTCAACTGCGCCGAC GTGACGGACCGCTTCGACCTACCGACTTACCTCTCGCTGCTGAAACCGGGCGGGGAATTCCACAACGTCGGCTTA CCGGACGAGCCGCTGCCGGAGTTGAAGGCGCAGGTGTACGCGGTGAACGCGCCCAAGATGACGGGGAGCCATCTG GGAAACCATCAGGAGATGGTGGATTTGTTGCGGTTGGCGGTCGAGAAGGGGGTCAAGCCTTGGGTCGAGAGCATC GAGGTTGGGGAGAAGGGGTGTAGGGAGGCGGTTGAGAGGTTGAGGGAGGATCGGGTGAGGTATCGGTTTTCGTTG ACGGGGTTTGATGCCGCTTTTGGGAGGTGA |