Protein ID | Ophcf2|01584 |
Gene name | |
Location | scaffold_01:5405539..5408996 |
Strand | + |
Gene length (bp) | 3457 |
Transcript length (bp) | 2847 |
Coding sequence length (bp) | 2847 |
Protein length (aa) | 949 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00122 | E1-E2_ATPase | E1-E2 ATPase | 8.2E-48 | 204 | 383 |
PF00702 | Hydrolase | haloacid dehalogenase-like hydrolase | 3.6E-15 | 401 | 673 |
PF00690 | Cation_ATPase_N | Cation transporter/ATPase, N-terminus | 1.6E-08 | 90 | 143 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 61 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 126 | 148 | 22 |
2 | 168 | 187 | 19 |
3 | 316 | 338 | 22 |
4 | 358 | 380 | 22 |
5 | 718 | 740 | 22 |
6 | 746 | 765 | 19 |
7 | 786 | 808 | 22 |
8 | 852 | 874 | 22 |
9 | 883 | 905 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01584 MADEGPTGAPALDTSIESGRFDEKRAQAQPAPELPHTKPPAPAAEDEEEDEDIDALIEDLESQDGHGGFEEEEEE QGGPGVGRVVPEDMLQTDSHLGLTESEVSSRRRKYGLNQMKEEKENMILKFFSYFVGPIQFVMEILCCLASADWL LHTSFWAAAVLAAGLQDWVDFGVICALLLLNACVGFVQEFQAGSIVEELKKTLALKAVVLRDGTLKEIEAPEVVP GDILQVEEGTIIPADGRIVTEDAFLQVDQSAITGESLAVDKHKNDSCFASSAVKRGEAFLVVTATGDNTFVGRAA ALVSQSAGGTGHFTEVLNGIGTVLLILVVVTLLVVWTSSFYRSNPIVKILRFTLAITIVGVPVGLPAVVTTTMAV GAAYLAKKQAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLSEPFTVPGVDPDDLMLTACLAASRKKKGIDAID KAFLKALKYYPRAKSVLSKYKVLDFHPFDPVSKKVQAVVESPQGERIICVKGAPLFVLKTVEEDHPIPESIDKAY KNCVAEFATRGFRSLGVARKRGEGAWEILGIMPCSDPPRHDTARTINEAKLLGLSIKMLTGDAVGIARETSRQLG LGTNVYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYSVVEILQQRGYLVAMTGDGVNDAPSLKKADTG IAVEGASDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSLHMEIFLGLWIAILNRSLNIELIV FIAIFADIATLAIAYDNAPFSQTPVKWNLPKLWGMSVLLGVVLAIGTWITLTTMYAGGEGRGIIQNFGNMDEVLF LEISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDIIATLFCIFGWFEHGHQTSIVAVVRIWIFSFGIFAVMG GLYYFMQGSAGFDSLMHGKSPKRNQKQRSLEDFVVSLQRVSTQHEKSQ* |
Coding | >Ophcf2|01584 ATGGCCGACGAGGGCCCTACCGGCGCGCCCGCGCTCGACACCAGCATCGAGTCGGGTCGCTTCGACGAGAAGAGA GCTCAAGCCCAGCCGGCTCCCGAATTACCGCATACCAAGCCCCCGGCTCCCGCCGCCGAAGACGAGGAAGAGGAT GAGGACATTGACGCCCTGATTGAGGATCTCGAATCCCAAGATGGCCATGGCGGCTTCGAAGAGGAGGAAGAGGAA CAGGGTGGTCCAGGCGTCGGCCGTGTCGTTCCCGAGGACATGCTTCAGACGGACAGCCACCTTGGTCTCACCGAG TCCGAGGTCAGCTCGCGCCGTCGCAAGTACGGTCTCAACCAGATGAAGGAAGAGAAGGAGAACATGATTCTCAAG TTCTTTTCCTACTTTGTCGGGCCCATCCAGTTCGTCATGGAGATTTTGTGTTGCCTGGCTTCCGCAGATTGGCTG CTCCACACGAGCTTTTGGGCTGCCGCCGTCTTGGCTGCCGGTCTGCAAGATTGGGTCGACTTTGGTGTCATCTGT GCCCTGCTATTGCTCAACGCCTGTGTCGGTTTCGTCCAGGAATTCCAGGCTGGCTCCATCGTCGAGGAGCTCAAG AAGACGCTGGCCCTAAAGGCCGTCGTTCTGCGCGACGGTACTCTCAAGGAAATCGAGGCCCCAGAGGTCGTACCC GGCGATATCCTGCAGGTCGAAGAGGGCACCATCATCCCCGCCGACGGACGCATCGTGACCGAAGATGCCTTCCTC CAGGTCGATCAGTCGGCCATCACGGGCGAGTCGCTCGCCGTCGACAAGCACAAGAATGACAGCTGTTTCGCTTCC TCGGCCGTCAAGCGTGGCGAGGCCTTCTTGGTGGTCACCGCCACCGGCGACAACACCTTCGTCGGCCGCGCTGCC GCCCTCGTCTCCCAGTCCGCCGGCGGCACCGGTCACTTCACAGAGGTGCTCAACGGCATCGGCACCGTCCTGCTG ATCCTCGTCGTCGTCACCCTGCTCGTCGTCTGGACCTCGTCCTTCTATCGCTCCAATCCCATCGTCAAGATCCTG CGCTTCACCCTGGCCATCACCATCGTCGGCGTCCCCGTCGGTCTACCCGCTGTCGTCACCACCACCATGGCCGTC GGCGCCGCCTACCTCGCCAAGAAGCAGGCCATTGTCCAGAAGCTGTCGGCCATCGAGTCCCTGGCTGGTGTCGAG ATCCTCTGCTCCGACAAGACGGGCACCCTGACAAAGAACAAGCTGTCGCTTTCGGAGCCCTTTACCGTTCCCGGC GTCGACCCCGACGACCTGATGCTGACGGCCTGCTTGGCTGCCTCGCGCAAGAAGAAGGGTATCGACGCCATCGAC AAGGCCTTCCTCAAGGCGCTCAAGTACTACCCCCGCGCCAAGAGTGTCCTGTCCAAGTACAAGGTGCTCGATTTC CATCCCTTCGATCCCGTCTCGAAAAAGGTGCAGGCCGTCGTCGAGTCGCCTCAGGGCGAGCGCATCATCTGCGTC AAGGGAGCGCCGCTCTTCGTCCTCAAGACCGTCGAGGAGGACCACCCGATCCCCGAGTCCATCGACAAGGCCTAC AAGAACTGCGTCGCCGAGTTCGCCACCCGCGGCTTCCGTTCGCTCGGTGTCGCCCGCAAGCGCGGCGAGGGTGCC TGGGAGATTCTCGGCATCATGCCCTGCTCCGATCCTCCTCGTCACGACACGGCCAGGACCATCAACGAGGCCAAG CTGCTGGGTCTGTCCATCAAGATGTTGACGGGTGACGCCGTCGGCATCGCCCGTGAGACGTCTCGTCAGCTCGGC CTCGGCACCAACGTCTACAACGCCGAGCGGCTCGGTCTCGGCGGCGGCGGCGACATGCCCGGCTCCGAGGTGTAC GATTTCGTCGAGGCCGCCGACGGTTTCGCCGAGGTGTTCCCCCAGCACAAGTACTCGGTCGTCGAGATCCTGCAG CAGCGTGGCTACCTCGTCGCCATGACCGGAGACGGTGTCAACGACGCGCCCTCGCTGAAGAAGGCAGACACGGGC ATCGCCGTCGAGGGGGCCTCCGACGCCGCCCGATCCGCCGCCGACATCGTCTTTCTCGCGCCCGGCCTCGGGGCC ATTATCGATGCCCTCAAGACGTCGCGCCAGATCTTCCACCGCATGTACGCCTACGTCGTCTACCGTATTGCCCTG TCCCTTCACATGGAGATCTTCCTCGGCCTCTGGATCGCCATCCTGAACCGCAGTCTCAACATTGAGCTCATCGTC TTCATCGCCATCTTCGCCGACATCGCCACGCTGGCCATTGCCTACGACAACGCCCCCTTCTCGCAGACGCCCGTC AAGTGGAACCTCCCCAAGCTCTGGGGCATGTCGGTCCTGCTGGGCGTCGTCCTGGCCATTGGCACCTGGATCACG CTGACGACCATGTACGCCGGCGGCGAGGGACGCGGTATCATCCAGAACTTTGGCAACATGGACGAGGTGCTTTTC CTCGAAATCTCGCTGACGGAGAACTGGCTCATCTTCATCACGCGTGCCAACGGGCCATTTTGGTCGTCGATTCCG TCGTGGCAGCTCAGCGGCGCCATCTTCCTCGTCGACATCATCGCCACCCTGTTCTGCATCTTCGGCTGGTTCGAA CATGGGCACCAGACGAGCATCGTGGCCGTGGTCCGGATCTGGATCTTCTCCTTCGGCATCTTCGCCGTCATGGGC GGCCTGTACTACTTCATGCAGGGCTCCGCGGGCTTCGACAGCCTGATGCACGGCAAGTCCCCGAAGCGGAACCAG AAGCAGCGATCACTGGAAGACTTTGTCGTCTCCCTGCAGCGTGTCTCGACTCAGCACGAGAAGTCTCAGTAA |
Transcript | >Ophcf2|01584 ATGGCCGACGAGGGCCCTACCGGCGCGCCCGCGCTCGACACCAGCATCGAGTCGGGTCGCTTCGACGAGAAGAGA GCTCAAGCCCAGCCGGCTCCCGAATTACCGCATACCAAGCCCCCGGCTCCCGCCGCCGAAGACGAGGAAGAGGAT GAGGACATTGACGCCCTGATTGAGGATCTCGAATCCCAAGATGGCCATGGCGGCTTCGAAGAGGAGGAAGAGGAA CAGGGTGGTCCAGGCGTCGGCCGTGTCGTTCCCGAGGACATGCTTCAGACGGACAGCCACCTTGGTCTCACCGAG TCCGAGGTCAGCTCGCGCCGTCGCAAGTACGGTCTCAACCAGATGAAGGAAGAGAAGGAGAACATGATTCTCAAG TTCTTTTCCTACTTTGTCGGGCCCATCCAGTTCGTCATGGAGATTTTGTGTTGCCTGGCTTCCGCAGATTGGCTG CTCCACACGAGCTTTTGGGCTGCCGCCGTCTTGGCTGCCGGTCTGCAAGATTGGGTCGACTTTGGTGTCATCTGT GCCCTGCTATTGCTCAACGCCTGTGTCGGTTTCGTCCAGGAATTCCAGGCTGGCTCCATCGTCGAGGAGCTCAAG AAGACGCTGGCCCTAAAGGCCGTCGTTCTGCGCGACGGTACTCTCAAGGAAATCGAGGCCCCAGAGGTCGTACCC GGCGATATCCTGCAGGTCGAAGAGGGCACCATCATCCCCGCCGACGGACGCATCGTGACCGAAGATGCCTTCCTC CAGGTCGATCAGTCGGCCATCACGGGCGAGTCGCTCGCCGTCGACAAGCACAAGAATGACAGCTGTTTCGCTTCC TCGGCCGTCAAGCGTGGCGAGGCCTTCTTGGTGGTCACCGCCACCGGCGACAACACCTTCGTCGGCCGCGCTGCC GCCCTCGTCTCCCAGTCCGCCGGCGGCACCGGTCACTTCACAGAGGTGCTCAACGGCATCGGCACCGTCCTGCTG ATCCTCGTCGTCGTCACCCTGCTCGTCGTCTGGACCTCGTCCTTCTATCGCTCCAATCCCATCGTCAAGATCCTG CGCTTCACCCTGGCCATCACCATCGTCGGCGTCCCCGTCGGTCTACCCGCTGTCGTCACCACCACCATGGCCGTC GGCGCCGCCTACCTCGCCAAGAAGCAGGCCATTGTCCAGAAGCTGTCGGCCATCGAGTCCCTGGCTGGTGTCGAG ATCCTCTGCTCCGACAAGACGGGCACCCTGACAAAGAACAAGCTGTCGCTTTCGGAGCCCTTTACCGTTCCCGGC GTCGACCCCGACGACCTGATGCTGACGGCCTGCTTGGCTGCCTCGCGCAAGAAGAAGGGTATCGACGCCATCGAC AAGGCCTTCCTCAAGGCGCTCAAGTACTACCCCCGCGCCAAGAGTGTCCTGTCCAAGTACAAGGTGCTCGATTTC CATCCCTTCGATCCCGTCTCGAAAAAGGTGCAGGCCGTCGTCGAGTCGCCTCAGGGCGAGCGCATCATCTGCGTC AAGGGAGCGCCGCTCTTCGTCCTCAAGACCGTCGAGGAGGACCACCCGATCCCCGAGTCCATCGACAAGGCCTAC AAGAACTGCGTCGCCGAGTTCGCCACCCGCGGCTTCCGTTCGCTCGGTGTCGCCCGCAAGCGCGGCGAGGGTGCC TGGGAGATTCTCGGCATCATGCCCTGCTCCGATCCTCCTCGTCACGACACGGCCAGGACCATCAACGAGGCCAAG CTGCTGGGTCTGTCCATCAAGATGTTGACGGGTGACGCCGTCGGCATCGCCCGTGAGACGTCTCGTCAGCTCGGC CTCGGCACCAACGTCTACAACGCCGAGCGGCTCGGTCTCGGCGGCGGCGGCGACATGCCCGGCTCCGAGGTGTAC GATTTCGTCGAGGCCGCCGACGGTTTCGCCGAGGTGTTCCCCCAGCACAAGTACTCGGTCGTCGAGATCCTGCAG CAGCGTGGCTACCTCGTCGCCATGACCGGAGACGGTGTCAACGACGCGCCCTCGCTGAAGAAGGCAGACACGGGC ATCGCCGTCGAGGGGGCCTCCGACGCCGCCCGATCCGCCGCCGACATCGTCTTTCTCGCGCCCGGCCTCGGGGCC ATTATCGATGCCCTCAAGACGTCGCGCCAGATCTTCCACCGCATGTACGCCTACGTCGTCTACCGTATTGCCCTG TCCCTTCACATGGAGATCTTCCTCGGCCTCTGGATCGCCATCCTGAACCGCAGTCTCAACATTGAGCTCATCGTC TTCATCGCCATCTTCGCCGACATCGCCACGCTGGCCATTGCCTACGACAACGCCCCCTTCTCGCAGACGCCCGTC AAGTGGAACCTCCCCAAGCTCTGGGGCATGTCGGTCCTGCTGGGCGTCGTCCTGGCCATTGGCACCTGGATCACG CTGACGACCATGTACGCCGGCGGCGAGGGACGCGGTATCATCCAGAACTTTGGCAACATGGACGAGGTGCTTTTC CTCGAAATCTCGCTGACGGAGAACTGGCTCATCTTCATCACGCGTGCCAACGGGCCATTTTGGTCGTCGATTCCG TCGTGGCAGCTCAGCGGCGCCATCTTCCTCGTCGACATCATCGCCACCCTGTTCTGCATCTTCGGCTGGTTCGAA CATGGGCACCAGACGAGCATCGTGGCCGTGGTCCGGATCTGGATCTTCTCCTTCGGCATCTTCGCCGTCATGGGC GGCCTGTACTACTTCATGCAGGGCTCCGCGGGCTTCGACAGCCTGATGCACGGCAAGTCCCCGAAGCGGAACCAG AAGCAGCGATCACTGGAAGACTTTGTCGTCTCCCTGCAGCGTGTCTCGACTCAGCACGAGAAGTCTCAGTAA |
Gene | >Ophcf2|01584 ATGGCCGACGAGGGCCCTACCGGCGCGCCCGCGCTCGACACCAGCATCGAGTCGGGTCGCTTCGACGAGAAGAGA GCTCAAGCCCAGCCGGCTCCCGAATTACCGCATACCAAGCCCCCGGCTCCCGCCGCCGAAGACGAGGAAGAGGAT GAGGACATTGACGCCCTGATTGAGGATCTCGAATCCCAAGATGGCCATGGCGGCTTCGAAGAGGAGGAAGAGGAA CAGGGTGGTCCAGGCGTCGGCCGTGTCGTTCCCGAGGACATGCTTCAGACGGACAGCCACCTTGGTCTCACCGAG TCCGAGGTCAGCTCGCGCCGTCGCAAGTACGGTCTCAACCAGATGAAGGAAGAGAAGGAGAACATGATTCTCAAG TTCTTTTCCTACTTTGTCGGGCCCATCCAGTTCGTCATGGAGGTGAGTTTTTTTTTTTCTTTCTTTCTTTTTGTC CTTTTTCCATGCCGTCTTCTCCTCTCTTCTACGTGTTGTTTTTTTTTGCTTTTGGCCTTGTCCTCCTCCGATGTC GACCTTTGGAATGCGACTGCGAATTCCCGACCAGCCACCTTCAGCTGGTCTTGTTTTCCCTGGATCGGAGCCTCT TCGGCCGCTCTCACTGTTTTTTTTTTTAAACCCCGTCCCTCTTTTTATTCTCTTTTAGATTTTGTGTTGCCTGGC TTCCGCAGATTGGCTGCTCCACACGAGCTTTTGGGTGGGCCGTCATCAATTGGGCCCTAGCAGTCAATGCTCAGT GGAGAGGGGAAACGATGCTCACCCGCTACGACGCCACCCCACTGTTCTGTTTGTTGCGAAACAAAGTTCCTCGTG CTGATCAAGCCCTTTGTTTTTTTTTTTTTCCCTTTTTTTTTCCCCTTCTGCTTGTCATTGGCACGCGACGCTAAC CCCTGCTTTTCCAATCAGGCTGCCGCCGTCTTGGCTGCCGGTCTGCAAGATTGGGTCGACTTTGGTGTCATCTGT GCCCTGCTATTGCTCAACGCCTGTGTCGGTTTCGTCCAGGAATTCCAGGCTGGCTCCATCGTCGAGGAGCTCAAG AAGACGCTGGCCCTAAAGGCCGTCGTTCTGCGCGACGGTACTCTCAAGGAAATCGAGGCCCCAGAGGTCGTACCC GGCGATATCCTGCAGGTCGAAGAGGTGAGTGATTTTTTTTTCCAAAAAAAAACATTCTCCACCTTACCCATCATC GTGGGCCTCCATGACGTATGTCGTACACGTGCTGACTAGCGCATTACAGGGCACCATCATCCCCGCCGACGGACG CATCGTGACCGAAGATGCCTTCCTCCAGGTCGATCAGTCGGCCATCACGGGCGAGTCGCTCGCCGTCGACAAGCA CAAGAATGACAGCTGTTTCGCTTCCTCGGCCGTCAAGCGTGGCGAGGCCTTCTTGGTGGTCACCGCCACCGGCGA CAACACCTTCGTCGGCCGCGCTGCCGCCCTCGTCTCCCAGTCCGCCGGCGGCACCGGTCACTTCACAGAGGTGCT CAACGGCATCGGCACCGTCCTGCTGATCCTCGTCGTCGTCACCCTGCTCGTCGTCTGGACCTCGTCCTTCTATCG CTCCAATCCCATCGTCAAGATCCTGCGCTTCACCCTGGCCATCACCATCGTCGGCGTCCCCGTCGGTCTACCCGC TGTCGTCACCACCACCATGGCCGTCGGCGCCGCCTACCTCGCCAAGAAGCAGGCCATTGTCCAGAAGCTGTCGGC CATCGAGTCCCTGGCTGGTGTCGAGATCCTCTGCTCCGACAAGACGGGCACCCTGACAAAGAACAAGCTGTCGCT TTCGGAGCCCTTTACCGTTCCCGGCGTCGACCCCGACGACCTGATGCTGACGGCCTGCTTGGCTGCCTCGCGCAA GAAGAAGGGTATCGACGCCATCGACAAGGCCTTCCTCAAGGCGCTCAAGTACTACCCCCGCGCCAAGAGTGTCCT GTCCAAGTACAAGGTGCTCGATTTCCATCCCTTCGATCCCGTCTCGAAAAAGGTGCAGGCCGTCGTCGAGTCGCC TCAGGGCGAGCGCATCATCTGCGTCAAGGGAGCGCCGCTCTTCGTCCTCAAGACCGTCGAGGAGGACCACCCGAT CCCCGAGTCCATCGACAAGGCCTACAAGAACTGCGTCGCCGAGTTCGCCACCCGCGGCTTCCGTTCGCTCGGTGT CGCCCGCAAGCGCGGCGAGGGTGCCTGGGAGATTCTCGGCATCATGCCCTGCTCCGATCCTCCTCGTCACGACAC GGCCAGGACCATCAACGAGGCCAAGCTGCTGGGTCTGTCCATCAAGATGTTGACGGGTGACGCCGTCGGCATCGC CCGTGAGACGTCTCGTCAGCTCGGCCTCGGCACCAACGTCTACAACGCCGAGCGGCTCGGTCTCGGCGGCGGCGG CGACATGCCCGGCTCCGAGGTGTACGATTTCGTCGAGGCCGCCGACGGTTTCGCCGAGGTGTTCCCCCAGCACAA GTACTCGGTCGTCGAGATCCTGCAGCAGCGTGGCTACCTCGTCGCCATGACCGGAGACGGTGTCAACGACGCGCC CTCGCTGAAGAAGGCAGACACGGGCATCGCCGTCGAGGGGGCCTCCGACGCCGCCCGATCCGCCGCCGACATCGT CTTTCTCGCGCCCGGCCTCGGGGCCATTATCGATGCCCTCAAGACGTCGCGCCAGATCTTCCACCGCATGTACGC CTACGTCGTCTACCGTATTGCCCTGTCCCTTCACATGGAGATCTTCCTCGGCCTCTGGATCGCCATCCTGAACCG CAGTCTCAACATTGAGCTCATCGTCTTCATCGCCATCTTCGCCGACATCGCCACGCTGGCCATTGCCTACGACAA CGCCCCCTTCTCGCAGACGCCCGTCAAGTGGAACCTCCCCAAGCTCTGGGGCATGTCGGTCCTGCTGGGCGTCGT CCTGGCCATTGGCACCTGGATCACGCTGACGACCATGTACGCCGGCGGCGAGGGACGCGGTATCATCCAGAACTT TGGCAACATGGACGAGGTGCTTTTCCTCGAAATCTCGCTGACGGAGAACTGGCTCATCTTCATCACGCGTGCCAA CGGGCCATTTTGGTCGTCGATTCCGTCGTGGCAGCTCAGCGGCGCCATCTTCCTCGTCGACATCATCGCCACCCT GTTCTGCATCTTCGGCTGGTTCGAACATGGGCACCAGACGAGCATCGTGGCCGTGGTCCGGATCTGGATCTTCTC CTTCGGCATCTTCGCCGTCATGGGCGGCCTGTACTACTTCATGCAGGGCTCCGCGGGCTTCGACAGCCTGATGCA CGGCAAGTCCCCGAAGCGGAACCAGAAGCAGCGATCACTGGAAGACTTTGGTGAGTCTCGTTTCCCCCCCCCCCT TCTCGCGCCTCGAAACGAAGCTGACGAGGCGGCAGTCGTCTCCCTGCAGCGTGTCTCGACTCAGCACGAGAAGTC TCAGTAA |