Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01573
Gene name
Locationscaffold_01:5369495..5370531
Strand+
Gene length (bp)1036
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00397 WW WW domain 1.8E-09 18 48

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 242 264 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01573
MADYLPPSGPPPPKAPEVPAGWAARWNEQYKEWFYVNIYTKKSQWEKPTAPVFPIGDNAAEEPPPGYEPGNGPVP
TDVKKNPYEQHGANNAGPSEDEDAKLAAKLQAEEDARARYASPGGGAQYGQQQGQFPQDLPPRDRVASKGGFLGK
LFGKGKAPAGVGGYGSQPQQQQGYYQSTPPPPPPPQQYGGYSGGYGGQPPPQQGYGQGGYGGYGGYPPQQGYGPP
PTQAGGRKPGMGGMGGMGGMGMGLAGGAALGMLGGGLLANHEMHERDEAYDEGYMDANADDYGGGDYGGDYGGDF
GGDGFGGD*
Coding >Ophcf2|01573
ATGGCCGATTATCTTCCTCCCTCTGGCCCGCCGCCGCCTAAGGCTCCTGAGGTGCCGGCCGGATGGGCAGCGCGC
TGGAACGAGCAGTATAAAGAATGGTTCTACGTCAACATCTACACCAAAAAGTCGCAGTGGGAGAAGCCAACAGCG
CCCGTATTCCCCATCGGCGACAACGCGGCCGAAGAACCGCCGCCAGGGTACGAGCCGGGAAACGGACCGGTCCCT
ACAGACGTCAAGAAGAATCCCTACGAACAGCACGGCGCCAATAACGCCGGCCCTTCTGAAGATGAAGACGCCAAG
CTCGCTGCCAAGCTGCAGGCCGAGGAGGACGCCAGAGCTCGGTATGCCAGTCCCGGAGGCGGCGCGCAGTACGGT
CAGCAGCAGGGACAGTTCCCGCAGGATTTGCCGCCTCGCGATCGGGTAGCCTCCAAGGGGGGGTTTCTCGGCAAG
CTGTTTGGCAAGGGGAAGGCTCCGGCTGGCGTTGGGGGGTATGGCTCGCAGCCGCAGCAGCAGCAGGGATATTAC
CAGTCGACGCCGCCGCCGCCGCCGCCGCCGCAACAGTACGGTGGATATTCGGGGGGTTATGGCGGGCAGCCTCCG
CCTCAGCAGGGTTACGGACAGGGCGGATATGGCGGCTACGGAGGATATCCGCCTCAGCAGGGGTATGGGCCGCCG
CCGACGCAGGCGGGAGGTAGGAAACCTGGGATGGGGGGGATGGGGGGTATGGGAGGGATGGGGATGGGCCTTGCG
GGCGGGGCTGCGCTGGGCATGTTGGGCGGTGGTTTGCTCGCTAATCATGAGATGCACGAGCGAGATGAGGCGTAC
GATGAGGGATACATGGATGCCAATGCCGACGATTATGGTGGTGGTGATTATGGGGGTGACTATGGGGGTGACTTT
GGTGGTGATGGCTTCGGCGGAGATTGA
Transcript >Ophcf2|01573
ATGGCCGATTATCTTCCTCCCTCTGGCCCGCCGCCGCCTAAGGCTCCTGAGGTGCCGGCCGGATGGGCAGCGCGC
TGGAACGAGCAGTATAAAGAATGGTTCTACGTCAACATCTACACCAAAAAGTCGCAGTGGGAGAAGCCAACAGCG
CCCGTATTCCCCATCGGCGACAACGCGGCCGAAGAACCGCCGCCAGGGTACGAGCCGGGAAACGGACCGGTCCCT
ACAGACGTCAAGAAGAATCCCTACGAACAGCACGGCGCCAATAACGCCGGCCCTTCTGAAGATGAAGACGCCAAG
CTCGCTGCCAAGCTGCAGGCCGAGGAGGACGCCAGAGCTCGGTATGCCAGTCCCGGAGGCGGCGCGCAGTACGGT
CAGCAGCAGGGACAGTTCCCGCAGGATTTGCCGCCTCGCGATCGGGTAGCCTCCAAGGGGGGGTTTCTCGGCAAG
CTGTTTGGCAAGGGGAAGGCTCCGGCTGGCGTTGGGGGGTATGGCTCGCAGCCGCAGCAGCAGCAGGGATATTAC
CAGTCGACGCCGCCGCCGCCGCCGCCGCCGCAACAGTACGGTGGATATTCGGGGGGTTATGGCGGGCAGCCTCCG
CCTCAGCAGGGTTACGGACAGGGCGGATATGGCGGCTACGGAGGATATCCGCCTCAGCAGGGGTATGGGCCGCCG
CCGACGCAGGCGGGAGGTAGGAAACCTGGGATGGGGGGGATGGGGGGTATGGGAGGGATGGGGATGGGCCTTGCG
GGCGGGGCTGCGCTGGGCATGTTGGGCGGTGGTTTGCTCGCTAATCATGAGATGCACGAGCGAGATGAGGCGTAC
GATGAGGGATACATGGATGCCAATGCCGACGATTATGGTGGTGGTGATTATGGGGGTGACTATGGGGGTGACTTT
GGTGGTGATGGCTTCGGCGGAGATTGA
Gene >Ophcf2|01573
ATGGCCGATTATCTTCCTCCCTCTGGCCCGCCGCCGCCTAAGGCTCCTGAGGTGCCGGCCGGATGGGCAGCGCGC
TGGAACGAGCAGTATAAAGAATGGTGCGTTGCTGGAAATCATGGTCATTTGGAAAAACACATCTAACCCTCAGCG
ACAGGTTCTACGTCAACATCTACACCAAAAAGTCGCAGTGGGAGAAGCCAACAGCGCCCGTATTCCCCATCGGCG
ACAACGCGGCCGAAGAACCGCCGCCAGGGTACGAGCCGGGAAACGGACCGGTCCCTACAGACGTCAAGAAGAATC
CCTACGAACAGCACGGCGCCAATAACGCCGGCCCTTCTGAAGATGAAGACGCCAAGCTCGCTGCCAAGCTGCAGG
CCGAGGAGGACGCCAGAGCTCGGTATGCCAGTCCCGGAGGCGGCGCGCAGTACGGTCAGCAGCAGGGACAGTTCC
CGCAGGATTTGCCGCCTCGCGATCGGGTAGCCTCCAAGGGGGGGTTTCTCGGCAAGCTGTTTGGCAAGGGGAAGG
CTCCGGCTGGCGTTGGGGGGTATGGCTCGCAGCCGCAGCAGCAGCAGGGATATTACCAGTCGACGCCGCCGCCGC
CGCCGCCGCCGCAACAGTACGGTGGATATTCGGGGGGTTATGGCGGGCAGCCTCCGCCTCAGCAGGGTTACGGAC
AGGGCGGATATGGCGGCTACGGAGGATATCCGCCTCAGCAGGGGTATGGGCCGCCGCCGACGCAGGCGGGAGGTA
GGAAACCTGGGATGGGGGGGATGGGGGGTATGGGAGGGATGGGGATGGGCCTTGCGGGCGGGGCTGCGCTGGGCA
TGTTGGGCGGTGGTTTGCTCGCTAATCATGAGATGCACGAGCGAGATGAGGCGTACGATGAGGGATACAGTGAGT
TTTGTTTTCCCGGGTTGTCTTGTTTGTCTTGCTGACTGGTGTTGCAGTGGATGCCAATGCCGACGATTATGGTGG
TGGTGATTATGGGGGTGACTATGGGGGTGACTTTGGTGGTGATGGCTTCGGCGGAGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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