Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01562
Gene name
Locationscaffold_01:5340422..5341121
Strand+
Gene length (bp)699
Transcript length (bp)426
Coding sequence length (bp)426
Protein length (aa) 142

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08695 Coa1 Cytochrome oxidase complex assembly protein 1 5.5E-29 51 136

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.118 0.1183 0.0415 0.0423 0.9666 0.0672 0.123 0.0334 0.0904 0.0318

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup6077
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3163
Ophiocordyceps australis map64 (Brazil) OphauB2|5128
Ophiocordyceps camponoti-floridani Ophcf2|01562 (this protein)
Ophiocordyceps kimflemingae Ophio5|5566
Ophiocordyceps subramaniannii Hirsu2|2871

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01562
MASRSGRMTLLVVRRWIATAAPKKGDAPLMTRRADRKLPNLSQIRPPTWRRTLPFFILTMALASAAIFNYQKTTS
PVIAAALYALRTSPVARAHLGDDIYFAHAIPWISGELNTLRGRVDICFSVKGDRGKGVVRQSGMGK*
Coding >Ophcf2|01562
ATGGCGTCCCGGTCGGGGCGGATGACGCTCCTCGTCGTTAGGAGATGGATTGCGACCGCAGCGCCCAAGAAAGGA
GATGCTCCTCTCATGACGCGTCGAGCGGACCGGAAGCTGCCCAACCTCTCGCAAATCCGCCCCCCAACCTGGCGC
CGAACCCTCCCCTTCTTCATCCTCACAATGGCTCTCGCCTCGGCCGCAATCTTCAACTACCAAAAGACCACCTCC
CCCGTCATCGCAGCCGCCCTGTACGCGCTACGCACCTCCCCGGTAGCACGCGCACACCTAGGCGACGACATATAC
TTCGCGCACGCGATACCGTGGATCAGCGGCGAGCTGAACACGCTGAGGGGGAGGGTGGACATTTGCTTCTCTGTC
AAGGGGGATAGGGGCAAGGGGGTTGTTAGGCAGAGTGGGATGGGGAAGTGA
Transcript >Ophcf2|01562
ATGGCGTCCCGGTCGGGGCGGATGACGCTCCTCGTCGTTAGGAGATGGATTGCGACCGCAGCGCCCAAGAAAGGA
GATGCTCCTCTCATGACGCGTCGAGCGGACCGGAAGCTGCCCAACCTCTCGCAAATCCGCCCCCCAACCTGGCGC
CGAACCCTCCCCTTCTTCATCCTCACAATGGCTCTCGCCTCGGCCGCAATCTTCAACTACCAAAAGACCACCTCC
CCCGTCATCGCAGCCGCCCTGTACGCGCTACGCACCTCCCCGGTAGCACGCGCACACCTAGGCGACGACATATAC
TTCGCGCACGCGATACCGTGGATCAGCGGCGAGCTGAACACGCTGAGGGGGAGGGTGGACATTTGCTTCTCTGTC
AAGGGGGATAGGGGCAAGGGGGTTGTTAGGCAGAGTGGGATGGGGAAGTGA
Gene >Ophcf2|01562
ATGGCGTCCCGGTCGGGGCGGATGACGCTCCTCGTCGTTAGGAGATGGATTGCGACCGCAGCGCCCAAGAAAGGA
GATGCTCCTCTCATGACGCGTCGAGCGGACCGGAAGCTGCCCAGTACTTGTCCCCCTCGCCCCGCCAACCCCTTT
AAAAAAGACAAGAATAACACGATAACTTCATCAAGACCTCTCGCAAATCCGCCCCCCAACCTGGCGCCGAACCCT
CCCCTTCTTCATCCTCACAATGGCTCTCGCCTCGGCCGCAATCTTCAACTACCAAAAGACCACCTCCCCCGTCAT
CGCAGCCGCCCTGTACGCGCTACGCACCTCCCCGGTAGCACGCGCACACCTAGGCGACGACATATACTTCGCGCA
CGCGATACCGTGGATCAGCGGCGAGCTGAACACGCTGAGGGGGAGGGTGGACATTTGCTTCTCTGTCAAGGGGGA
TAGGGGCAAGGGGGTTGTTAGGTTCGTGGCCGGGAGGCCTGCGGGCATGAGGGTTTCTTTTGTCGCGAGGGTTTG
GACCTTGACTTTTGAGGAGGGGGGGGTGGAGAGGTGGTTGATTTGTTGGAGGGGGGGCTGATCCTTTTGCTGTTT
TTGGGGGGGAGGGCTTGGGGGAGGGGATGGGGGAGGGGATGGGGGAGGGGATGGGGAGAGGGAGACGAGGGGTTT
AGGCAGAGTGGGATGGGGAAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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