Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01557
Gene name
Locationscaffold_01:5322994..5324362
Strand-
Gene length (bp)1368
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 224 246 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01557
MPPEPEPDINGANRSEAFQDKRPSRLADLNMSAPTSQAPTSVVESASTPSADHAAASSAVALPAAASSSSTPSNP
PPAASASTRAAPLPSSSSPSSSPVPLPTQQAPPLVPSSSSSTTTPLQHASMATPTSAPTQPSSSSSPPVAVVPSS
SSPQPEASSTVITVTSSNVATSVQVVTSTKTHAPVGGLSSSTATSSSPSSTSSAAAAAIETPSSATGLTQASKVA
IGVVVPIAAIAFLAIVGLFWWKKRRARQEVEEQRRKEVEDYSYNPNADPTMPAVGHTVEHAYEAKDDGGYRGWGS
TATTTGSGRGRKASTTMSGGAAGTYSDPASPVRANMSDARSGEALVDGSPTHEGEILGAMGPSAANNRGGDMRRG
PSNASSSYSAAARSDGSDGAMYGNGAAGYYEQCGQNPYEQRPNDQGGGQAVIRDNPARRNTRIENSSHYPQQSAG
IAQNF*
Coding >Ophcf2|01557
ATGCCACCCGAGCCGGAGCCGGACATCAATGGCGCTAACAGGAGTGAGGCATTCCAGGACAAGAGGCCATCTCGT
CTCGCCGACTTGAACATGTCGGCTCCCACGAGCCAGGCCCCGACGTCCGTCGTTGAGAGCGCCTCGACGCCTTCG
GCTGATCATGCCGCTGCTTCTTCTGCCGTTGCTCTTCCCGCTGCCGCCTCGTCCTCGTCTACCCCTTCCAATCCG
CCGCCTGCCGCCAGTGCCAGCACTCGAGCCGCTCCTTTGCCCTCCAGCTCATCACCGTCGTCGTCGCCAGTACCT
TTGCCCACGCAACAGGCGCCGCCTCTTGTTCCTTCGTCCAGCTCATCAACGACGACGCCTCTCCAGCATGCCTCT
ATGGCAACCCCGACTTCAGCCCCGACTCAGCCTTCTTCGTCCTCGTCTCCTCCCGTCGCCGTCGTCCCCTCGTCA
TCCTCCCCGCAGCCCGAGGCTTCTTCGACCGTCATCACCGTGACATCCAGCAATGTGGCCACAAGTGTACAGGTC
GTGACGTCGACCAAGACGCATGCCCCCGTCGGCGGGCTATCATCGTCGACGGCGACGTCGTCCTCGCCCTCGTCC
ACCTCGTCCGCCGCCGCCGCCGCCATCGAAACCCCCAGCTCTGCCACAGGCCTTACACAGGCGTCAAAGGTGGCC
ATTGGCGTCGTGGTGCCCATCGCCGCCATCGCCTTTCTAGCCATCGTCGGTCTTTTCTGGTGGAAGAAGCGGAGG
GCGCGTCAGGAGGTCGAGGAGCAACGCCGTAAGGAGGTCGAGGATTACTCGTACAACCCCAACGCGGACCCGACC
ATGCCCGCCGTCGGCCACACGGTCGAGCACGCCTACGAGGCCAAGGACGACGGCGGATACCGCGGCTGGGGCTCG
ACGGCCACCACCACGGGCTCCGGCAGGGGACGCAAGGCCTCGACCACCATGTCCGGGGGCGCGGCCGGCACCTAC
TCGGATCCGGCGTCGCCCGTGCGGGCCAACATGTCGGACGCTCGTTCGGGCGAGGCTCTCGTCGACGGCTCGCCG
ACGCACGAGGGCGAGATTCTGGGCGCCATGGGCCCGTCGGCGGCCAATAACCGCGGCGGCGACATGCGCAGGGGC
CCGTCCAACGCCTCTTCGTCTTACAGCGCGGCCGCCAGGTCTGACGGCTCCGACGGCGCCATGTACGGCAACGGG
GCGGCCGGCTATTACGAGCAGTGCGGCCAGAACCCCTACGAACAGCGACCCAACGACCAGGGCGGTGGCCAGGCC
GTCATCCGTGACAATCCGGCCCGACGCAACACGCGCATCGAGAATTCGTCTCACTACCCGCAGCAGAGCGCTGGC
ATTGCTCAGAACTTTTGA
Transcript >Ophcf2|01557
ATGCCACCCGAGCCGGAGCCGGACATCAATGGCGCTAACAGGAGTGAGGCATTCCAGGACAAGAGGCCATCTCGT
CTCGCCGACTTGAACATGTCGGCTCCCACGAGCCAGGCCCCGACGTCCGTCGTTGAGAGCGCCTCGACGCCTTCG
GCTGATCATGCCGCTGCTTCTTCTGCCGTTGCTCTTCCCGCTGCCGCCTCGTCCTCGTCTACCCCTTCCAATCCG
CCGCCTGCCGCCAGTGCCAGCACTCGAGCCGCTCCTTTGCCCTCCAGCTCATCACCGTCGTCGTCGCCAGTACCT
TTGCCCACGCAACAGGCGCCGCCTCTTGTTCCTTCGTCCAGCTCATCAACGACGACGCCTCTCCAGCATGCCTCT
ATGGCAACCCCGACTTCAGCCCCGACTCAGCCTTCTTCGTCCTCGTCTCCTCCCGTCGCCGTCGTCCCCTCGTCA
TCCTCCCCGCAGCCCGAGGCTTCTTCGACCGTCATCACCGTGACATCCAGCAATGTGGCCACAAGTGTACAGGTC
GTGACGTCGACCAAGACGCATGCCCCCGTCGGCGGGCTATCATCGTCGACGGCGACGTCGTCCTCGCCCTCGTCC
ACCTCGTCCGCCGCCGCCGCCGCCATCGAAACCCCCAGCTCTGCCACAGGCCTTACACAGGCGTCAAAGGTGGCC
ATTGGCGTCGTGGTGCCCATCGCCGCCATCGCCTTTCTAGCCATCGTCGGTCTTTTCTGGTGGAAGAAGCGGAGG
GCGCGTCAGGAGGTCGAGGAGCAACGCCGTAAGGAGGTCGAGGATTACTCGTACAACCCCAACGCGGACCCGACC
ATGCCCGCCGTCGGCCACACGGTCGAGCACGCCTACGAGGCCAAGGACGACGGCGGATACCGCGGCTGGGGCTCG
ACGGCCACCACCACGGGCTCCGGCAGGGGACGCAAGGCCTCGACCACCATGTCCGGGGGCGCGGCCGGCACCTAC
TCGGATCCGGCGTCGCCCGTGCGGGCCAACATGTCGGACGCTCGTTCGGGCGAGGCTCTCGTCGACGGCTCGCCG
ACGCACGAGGGCGAGATTCTGGGCGCCATGGGCCCGTCGGCGGCCAATAACCGCGGCGGCGACATGCGCAGGGGC
CCGTCCAACGCCTCTTCGTCTTACAGCGCGGCCGCCAGGTCTGACGGCTCCGACGGCGCCATGTACGGCAACGGG
GCGGCCGGCTATTACGAGCAGTGCGGCCAGAACCCCTACGAACAGCGACCCAACGACCAGGGCGGTGGCCAGGCC
GTCATCCGTGACAATCCGGCCCGACGCAACACGCGCATCGAGAATTCGTCTCACTACCCGCAGCAGAGCGCTGGC
ATTGCTCAGAACTTTTGA
Gene >Ophcf2|01557
ATGCCACCCGAGCCGGAGCCGGACATCAATGGCGCTAACAGGAGTGAGGCATTCCAGGACAAGAGGCCATCTCGT
CTCGCCGACTTGAACATGTCGGCTCCCACGAGCCAGGCCCCGACGTCCGTCGTTGAGAGCGCCTCGACGCCTTCG
GCTGATCATGCCGCTGCTTCTTCTGCCGTTGCTCTTCCCGCTGCCGCCTCGTCCTCGTCTACCCCTTCCAATCCG
CCGCCTGCCGCCAGTGCCAGCACTCGAGCCGCTCCTTTGCCCTCCAGCTCATCACCGTCGTCGTCGCCAGTACCT
TTGCCCACGCAACAGGCGCCGCCTCTTGTTCCTTCGTCCAGCTCATCAACGACGACGCCTCTCCAGCATGCCTCT
ATGGCAACCCCGACTTCAGCCCCGACTCAGCCTTCTTCGTCCTCGTCTCCTCCCGTCGCCGTCGTCCCCTCGTCA
TCCTCCCCGCAGCCCGAGGCTTCTTCGACCGTCATCACCGTGACATCCAGCAATGTGGCCACAAGTGTACAGGTC
GTGACGTCGACCAAGACGCATGCCCCCGTCGGCGGGCTATCATCGTCGACGGCGACGTCGTCCTCGCCCTCGTCC
ACCTCGTCCGCCGCCGCCGCCGCCATCGAAACCCCCAGCTCTGCCACAGGCCTTACACAGGCGTCAAAGGTGGCC
ATTGGCGTCGTGGTGCCCATCGCCGCCATCGCCTTTCTAGCCATCGTCGGTCTTTTCTGGTGGAAGAAGCGGAGG
GCGCGTCAGGAGGTCGAGGAGCAACGCCGTAAGGAGGTCGAGGATTACTCGTACAACCCCAACGCGGACCCGACC
ATGCCCGCCGTCGGCCACACGGTCGAGCACGCCTACGAGGCCAAGGACGACGGCGGATACCGCGGCTGGGGCTCG
ACGGCCACCACCACGGGCTCCGGCAGGGGACGCAAGGCCTCGACCACCATGTCCGGGGGCGCGGCCGGCACCTAC
TCGGATCCGGCGTCGCCCGTGCGGGCCAACATGTCGGACGCTCGTTCGGGCGAGGCTCTCGTCGACGGCTCGCCG
ACGCACGAGGGCGAGATTCTGGGCGCCATGGGCCCGTCGGCGGCCAATAACCGCGGCGGCGACATGCGCAGGGGC
CCGTCCAACGCCTCTTCGTCTTACAGCGCGGCCGCCAGGTCTGACGGCTCCGACGGCGCCATGTACGGCAACGGG
GCGGCCGGCTATTACGAGCAGTGCGGCCAGAACCCCTACGAACAGCGACCCAACGACCAGGGCGGTGGCCAGGCC
GTCATCCGTGACAATCCGGCCCGACGCAACACGCGCATCGAGAATTCGTCTCACTACCCGCAGCAGAGCGCTGGC
ATTGCTCAGAACTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail