© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01556 |
| Gene name | |
| Location | scaffold_01:5318287..5320549 |
| Strand | + |
| Gene length (bp) | 2262 |
| Transcript length (bp) | 2262 |
| Coding sequence length (bp) | 2262 |
| Protein length (aa) | 754 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 4.2E-21 | 43 | 205 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005615 | extracellular space | Yes |
| GO:0090729 | toxin activity | Yes |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1847 | 0.1493 | 0.8186 | 0.134 | 0.3035 | 0.0913 | 0.2118 | 0.1387 | 0.224 | 0.0139 |
| Orthofinder run ID | 4 |
| Orthogroup | 2 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01556 MHVKRATISALLYLEWPAVINAGNCLSGFCGPRSETPLEGPSVWRVDGKPPDVIQKLGGFRAKGTDFSIHKHAEI STANSAYVSTSERPVGAEIFASEPPPPGDFRRKNYKGSWLYDIHPSSNFISTRKTLGPYSSHRAEAEILAAGGIP FDQIKGWTYLSKGRMTAKSERRYVRNSAYDKAKYQGQTWNPEPQYELAGFPKKMDKANPRIPREHPWTHKEYEAF KDQSAEELREAGLRYLNDEGKASGIASFEPCFGLNGRAKREASSCWLGEEEVVEPEVYTKELDLGGKTEGESEVV LLNPAEEEKAALLVEKAAEDELAAVASKLLLRESPKLKDISLKEVRARFIGYKPLQPYMKTSRGRLWRGLTSAFT AVGLASWLKDVVQVSATASKRIDKLTTVTSIFPLVGCGTAVARSKDAFSGTLCLVGDVLLFTPKWPVGVAVHLFR FLAEAAKQSLRENMLWHDEAEFQKIRQKEWDAVFDNLVGYFRSNKFRNEVLEPEFDAERHGYAVQATDSVGMLRA MQQTAREKDVKGVPTDEQVFNATLHIYQHMCSSLLKRKESIMKEKQQAAEEFVKAEMKRFDLEFGNRTLDIFVNR TRPLLPTFVLDKQDLKYSQGGLTRTSKEEDHVPKDELVSTIRERLKKPLSYDMQGTFRDIQRHSSHLTYCRVQDA QSGGADMNQGRNASLLIQYQRDTDPIDHIAEAPPGRELAPQNGTPRRQPAAPNPETPRARTGGRQRQRVPVGRRR GGL* |
| Coding | >Ophcf2|01556 ATGCATGTCAAACGGGCCACTATATCGGCCCTGCTGTACCTTGAATGGCCTGCCGTCATCAACGCTGGCAACTGC CTGAGCGGCTTCTGCGGGCCAAGGAGCGAAACACCTCTCGAGGGACCATCAGTCTGGCGAGTCGACGGGAAACCT CCAGACGTTATTCAGAAACTAGGTGGCTTCCGTGCTAAGGGGACCGACTTCAGCATCCACAAACACGCCGAGATC AGCACCGCCAACTCAGCCTACGTCTCGACTTCGGAAAGGCCCGTCGGCGCCGAAATCTTCGCATCTGAACCTCCG CCCCCGGGCGACTTCAGGCGGAAGAATTACAAGGGGTCCTGGTTATACGATATACATCCGTCTTCGAACTTCATC AGTACGCGCAAGACTCTCGGCCCGTACTCGTCACATAGGGCCGAGGCGGAGATATTGGCGGCTGGTGGCATACCG TTCGACCAGATCAAGGGCTGGACTTACCTCTCCAAGGGACGCATGACGGCCAAGTCTGAAAGAAGATATGTGAGG AACTCGGCCTATGACAAGGCCAAGTACCAAGGCCAGACGTGGAACCCGGAGCCTCAGTATGAACTGGCTGGCTTT CCGAAAAAGATGGACAAGGCCAATCCTCGCATCCCTCGGGAACATCCCTGGACACATAAAGAATATGAAGCGTTC AAGGATCAAAGCGCGGAAGAACTCCGAGAGGCAGGCTTGAGGTATCTCAACGACGAGGGCAAAGCGTCCGGGATC GCTAGCTTCGAGCCCTGTTTCGGCCTGAACGGACGAGCCAAGCGAGAGGCTAGCTCGTGTTGGCTTGGGGAAGAG GAAGTTGTCGAGCCGGAGGTTTACACCAAGGAGCTTGACCTGGGCGGCAAAACAGAAGGAGAGTCAGAAGTCGTC CTCCTCAACCCAGCCGAGGAGGAGAAGGCGGCATTGCTGGTCGAAAAGGCTGCCGAGGACGAGCTGGCCGCCGTG GCCTCCAAGCTCTTGCTCCGGGAATCCCCAAAGCTCAAGGACATTTCGTTGAAGGAAGTACGGGCCAGATTCATA GGCTACAAGCCGCTGCAGCCGTATATGAAGACGTCAAGGGGTCGGTTGTGGCGAGGTCTGACCTCGGCTTTTACC GCTGTTGGCTTGGCCTCTTGGTTGAAGGACGTCGTGCAGGTTTCCGCGACGGCCTCCAAGCGTATCGACAAGTTG ACCACCGTCACTTCCATCTTTCCCCTCGTCGGCTGCGGGACTGCCGTTGCGAGGAGCAAAGATGCCTTCAGCGGC ACCTTGTGCCTCGTTGGCGACGTGCTCTTATTCACCCCCAAGTGGCCCGTCGGCGTCGCCGTTCATCTCTTCAGA TTCTTGGCTGAGGCGGCTAAACAAAGCCTCCGTGAGAACATGTTGTGGCACGACGAAGCCGAGTTTCAAAAGATT CGACAGAAGGAATGGGATGCTGTCTTTGACAACTTGGTTGGTTACTTCCGGTCCAACAAGTTCCGGAACGAGGTG CTCGAGCCCGAATTCGACGCCGAGAGGCATGGATATGCCGTCCAGGCGACTGACTCCGTCGGCATGCTCCGGGCT ATGCAGCAGACTGCGCGGGAGAAAGACGTCAAGGGGGTGCCGACGGATGAACAAGTCTTCAACGCTACCCTTCAC ATCTACCAGCACATGTGTTCGTCCCTACTGAAGCGCAAGGAGTCCATCATGAAGGAGAAACAACAGGCGGCAGAA GAGTTTGTCAAGGCGGAAATGAAGAGGTTCGACCTGGAGTTCGGCAACAGGACCCTAGATATATTCGTCAACAGG ACTCGGCCTCTATTGCCAACCTTTGTCCTCGACAAACAAGACTTGAAATATTCTCAGGGGGGCTTGACCAGAACA TCCAAGGAAGAAGACCATGTCCCCAAAGATGAACTCGTCTCGACAATCCGCGAGAGGCTTAAGAAGCCCCTGTCG TATGACATGCAGGGGACATTCCGGGACATCCAGAGACATTCCTCACATCTTACCTACTGCCGGGTTCAAGACGCC CAGTCCGGGGGAGCGGACATGAATCAAGGCCGCAACGCAAGCCTTCTCATACAATACCAGAGGGACACGGATCCC ATCGACCACATCGCCGAGGCACCTCCCGGTAGAGAGCTGGCTCCCCAAAACGGGACGCCGCGACGACAACCGGCG GCGCCGAACCCCGAGACTCCGAGAGCAAGGACTGGTGGACGACAGAGGCAGCGCGTACCAGTGGGACGGAGGAGA GGTGGACTGTAG |
| Transcript | >Ophcf2|01556 ATGCATGTCAAACGGGCCACTATATCGGCCCTGCTGTACCTTGAATGGCCTGCCGTCATCAACGCTGGCAACTGC CTGAGCGGCTTCTGCGGGCCAAGGAGCGAAACACCTCTCGAGGGACCATCAGTCTGGCGAGTCGACGGGAAACCT CCAGACGTTATTCAGAAACTAGGTGGCTTCCGTGCTAAGGGGACCGACTTCAGCATCCACAAACACGCCGAGATC AGCACCGCCAACTCAGCCTACGTCTCGACTTCGGAAAGGCCCGTCGGCGCCGAAATCTTCGCATCTGAACCTCCG CCCCCGGGCGACTTCAGGCGGAAGAATTACAAGGGGTCCTGGTTATACGATATACATCCGTCTTCGAACTTCATC AGTACGCGCAAGACTCTCGGCCCGTACTCGTCACATAGGGCCGAGGCGGAGATATTGGCGGCTGGTGGCATACCG TTCGACCAGATCAAGGGCTGGACTTACCTCTCCAAGGGACGCATGACGGCCAAGTCTGAAAGAAGATATGTGAGG AACTCGGCCTATGACAAGGCCAAGTACCAAGGCCAGACGTGGAACCCGGAGCCTCAGTATGAACTGGCTGGCTTT CCGAAAAAGATGGACAAGGCCAATCCTCGCATCCCTCGGGAACATCCCTGGACACATAAAGAATATGAAGCGTTC AAGGATCAAAGCGCGGAAGAACTCCGAGAGGCAGGCTTGAGGTATCTCAACGACGAGGGCAAAGCGTCCGGGATC GCTAGCTTCGAGCCCTGTTTCGGCCTGAACGGACGAGCCAAGCGAGAGGCTAGCTCGTGTTGGCTTGGGGAAGAG GAAGTTGTCGAGCCGGAGGTTTACACCAAGGAGCTTGACCTGGGCGGCAAAACAGAAGGAGAGTCAGAAGTCGTC CTCCTCAACCCAGCCGAGGAGGAGAAGGCGGCATTGCTGGTCGAAAAGGCTGCCGAGGACGAGCTGGCCGCCGTG GCCTCCAAGCTCTTGCTCCGGGAATCCCCAAAGCTCAAGGACATTTCGTTGAAGGAAGTACGGGCCAGATTCATA GGCTACAAGCCGCTGCAGCCGTATATGAAGACGTCAAGGGGTCGGTTGTGGCGAGGTCTGACCTCGGCTTTTACC GCTGTTGGCTTGGCCTCTTGGTTGAAGGACGTCGTGCAGGTTTCCGCGACGGCCTCCAAGCGTATCGACAAGTTG ACCACCGTCACTTCCATCTTTCCCCTCGTCGGCTGCGGGACTGCCGTTGCGAGGAGCAAAGATGCCTTCAGCGGC ACCTTGTGCCTCGTTGGCGACGTGCTCTTATTCACCCCCAAGTGGCCCGTCGGCGTCGCCGTTCATCTCTTCAGA TTCTTGGCTGAGGCGGCTAAACAAAGCCTCCGTGAGAACATGTTGTGGCACGACGAAGCCGAGTTTCAAAAGATT CGACAGAAGGAATGGGATGCTGTCTTTGACAACTTGGTTGGTTACTTCCGGTCCAACAAGTTCCGGAACGAGGTG CTCGAGCCCGAATTCGACGCCGAGAGGCATGGATATGCCGTCCAGGCGACTGACTCCGTCGGCATGCTCCGGGCT ATGCAGCAGACTGCGCGGGAGAAAGACGTCAAGGGGGTGCCGACGGATGAACAAGTCTTCAACGCTACCCTTCAC ATCTACCAGCACATGTGTTCGTCCCTACTGAAGCGCAAGGAGTCCATCATGAAGGAGAAACAACAGGCGGCAGAA GAGTTTGTCAAGGCGGAAATGAAGAGGTTCGACCTGGAGTTCGGCAACAGGACCCTAGATATATTCGTCAACAGG ACTCGGCCTCTATTGCCAACCTTTGTCCTCGACAAACAAGACTTGAAATATTCTCAGGGGGGCTTGACCAGAACA TCCAAGGAAGAAGACCATGTCCCCAAAGATGAACTCGTCTCGACAATCCGCGAGAGGCTTAAGAAGCCCCTGTCG TATGACATGCAGGGGACATTCCGGGACATCCAGAGACATTCCTCACATCTTACCTACTGCCGGGTTCAAGACGCC CAGTCCGGGGGAGCGGACATGAATCAAGGCCGCAACGCAAGCCTTCTCATACAATACCAGAGGGACACGGATCCC ATCGACCACATCGCCGAGGCACCTCCCGGTAGAGAGCTGGCTCCCCAAAACGGGACGCCGCGACGACAACCGGCG GCGCCGAACCCCGAGACTCCGAGAGCAAGGACTGGTGGACGACAGAGGCAGCGCGTACCAGTGGGACGGAGGAGA GGTGGACTGTAG |
| Gene | >Ophcf2|01556 ATGCATGTCAAACGGGCCACTATATCGGCCCTGCTGTACCTTGAATGGCCTGCCGTCATCAACGCTGGCAACTGC CTGAGCGGCTTCTGCGGGCCAAGGAGCGAAACACCTCTCGAGGGACCATCAGTCTGGCGAGTCGACGGGAAACCT CCAGACGTTATTCAGAAACTAGGTGGCTTCCGTGCTAAGGGGACCGACTTCAGCATCCACAAACACGCCGAGATC AGCACCGCCAACTCAGCCTACGTCTCGACTTCGGAAAGGCCCGTCGGCGCCGAAATCTTCGCATCTGAACCTCCG CCCCCGGGCGACTTCAGGCGGAAGAATTACAAGGGGTCCTGGTTATACGATATACATCCGTCTTCGAACTTCATC AGTACGCGCAAGACTCTCGGCCCGTACTCGTCACATAGGGCCGAGGCGGAGATATTGGCGGCTGGTGGCATACCG TTCGACCAGATCAAGGGCTGGACTTACCTCTCCAAGGGACGCATGACGGCCAAGTCTGAAAGAAGATATGTGAGG AACTCGGCCTATGACAAGGCCAAGTACCAAGGCCAGACGTGGAACCCGGAGCCTCAGTATGAACTGGCTGGCTTT CCGAAAAAGATGGACAAGGCCAATCCTCGCATCCCTCGGGAACATCCCTGGACACATAAAGAATATGAAGCGTTC AAGGATCAAAGCGCGGAAGAACTCCGAGAGGCAGGCTTGAGGTATCTCAACGACGAGGGCAAAGCGTCCGGGATC GCTAGCTTCGAGCCCTGTTTCGGCCTGAACGGACGAGCCAAGCGAGAGGCTAGCTCGTGTTGGCTTGGGGAAGAG GAAGTTGTCGAGCCGGAGGTTTACACCAAGGAGCTTGACCTGGGCGGCAAAACAGAAGGAGAGTCAGAAGTCGTC CTCCTCAACCCAGCCGAGGAGGAGAAGGCGGCATTGCTGGTCGAAAAGGCTGCCGAGGACGAGCTGGCCGCCGTG GCCTCCAAGCTCTTGCTCCGGGAATCCCCAAAGCTCAAGGACATTTCGTTGAAGGAAGTACGGGCCAGATTCATA GGCTACAAGCCGCTGCAGCCGTATATGAAGACGTCAAGGGGTCGGTTGTGGCGAGGTCTGACCTCGGCTTTTACC GCTGTTGGCTTGGCCTCTTGGTTGAAGGACGTCGTGCAGGTTTCCGCGACGGCCTCCAAGCGTATCGACAAGTTG ACCACCGTCACTTCCATCTTTCCCCTCGTCGGCTGCGGGACTGCCGTTGCGAGGAGCAAAGATGCCTTCAGCGGC ACCTTGTGCCTCGTTGGCGACGTGCTCTTATTCACCCCCAAGTGGCCCGTCGGCGTCGCCGTTCATCTCTTCAGA TTCTTGGCTGAGGCGGCTAAACAAAGCCTCCGTGAGAACATGTTGTGGCACGACGAAGCCGAGTTTCAAAAGATT CGACAGAAGGAATGGGATGCTGTCTTTGACAACTTGGTTGGTTACTTCCGGTCCAACAAGTTCCGGAACGAGGTG CTCGAGCCCGAATTCGACGCCGAGAGGCATGGATATGCCGTCCAGGCGACTGACTCCGTCGGCATGCTCCGGGCT ATGCAGCAGACTGCGCGGGAGAAAGACGTCAAGGGGGTGCCGACGGATGAACAAGTCTTCAACGCTACCCTTCAC ATCTACCAGCACATGTGTTCGTCCCTACTGAAGCGCAAGGAGTCCATCATGAAGGAGAAACAACAGGCGGCAGAA GAGTTTGTCAAGGCGGAAATGAAGAGGTTCGACCTGGAGTTCGGCAACAGGACCCTAGATATATTCGTCAACAGG ACTCGGCCTCTATTGCCAACCTTTGTCCTCGACAAACAAGACTTGAAATATTCTCAGGGGGGCTTGACCAGAACA TCCAAGGAAGAAGACCATGTCCCCAAAGATGAACTCGTCTCGACAATCCGCGAGAGGCTTAAGAAGCCCCTGTCG TATGACATGCAGGGGACATTCCGGGACATCCAGAGACATTCCTCACATCTTACCTACTGCCGGGTTCAAGACGCC CAGTCCGGGGGAGCGGACATGAATCAAGGCCGCAACGCAAGCCTTCTCATACAATACCAGAGGGACACGGATCCC ATCGACCACATCGCCGAGGCACCTCCCGGTAGAGAGCTGGCTCCCCAAAACGGGACGCCGCGACGACAACCGGCG GCGCCGAACCCCGAGACTCCGAGAGCAAGGACTGGTGGACGACAGAGGCAGCGCGTACCAGTGGGACGGAGGAGA GGTGGACTGTAG |