Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01514
Gene name
Locationscaffold_01:5196261..5197359
Strand+
Gene length (bp)1098
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06966 DUF1295 Protein of unknown function (DUF1295) 7.4E-34 73 288

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 39 60 21
3 75 97 22
4 118 140 22
5 150 172 22
6 203 225 22
7 240 262 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01514
MYEVHSSTTLLPTALTAFALQAAVGIPSAAAATERFYDISGSATVLAVGALGLCLPSLRAEGRWVGWRAVLAGRA
WGQIAVTAMAVVWTCRLGSYLFQRVLSEGKDSRFDKMRERPALMLAAFAAQACWVAAIMTPVIALNACPPTALPP
LGAIQALGFILWAGGMTLEVVADGQKGKWLQGRRQKQHDEPFLSSGLYSFCRFPNYLGEITLWSGVATVSAAALA
SPSAQAALGLRGGMGVLVTTGLAALSPAMTAFLLTCVSGIPLSEGKYDERFGHREDYKAWRRGTARLLPGIY*
Coding >Ophcf2|01514
ATGTACGAAGTACACAGCTCCACAACCCTCCTCCCCACCGCCCTCACGGCCTTCGCCCTGCAAGCCGCCGTCGGC
ATCCCCTCCGCCGCCGCAGCCACGGAGCGCTTCTACGACATCTCGGGCTCGGCCACCGTGCTGGCCGTCGGCGCT
CTCGGCCTGTGTCTTCCCAGCTTGAGGGCCGAGGGCCGCTGGGTCGGGTGGAGGGCTGTGCTTGCGGGGAGGGCG
TGGGGCCAGATTGCTGTCACGGCTATGGCGGTCGTGTGGACGTGTCGTCTCGGGTCGTATCTCTTTCAGAGGGTC
CTTTCAGAGGGCAAGGATTCGCGGTTCGATAAGATGAGGGAGCGGCCTGCGCTGATGCTAGCTGCCTTTGCGGCC
CAGGCTTGCTGGGTAGCAGCGATAATGACGCCCGTCATAGCCCTAAACGCCTGTCCGCCCACGGCCCTCCCCCCC
CTAGGAGCCATCCAAGCCCTCGGCTTCATCCTCTGGGCCGGCGGCATGACTCTCGAAGTCGTGGCCGACGGCCAA
AAAGGAAAATGGCTGCAAGGCCGCCGTCAAAAACAACACGACGAGCCCTTTCTCTCCTCGGGCCTATACTCCTTC
TGCCGCTTCCCAAACTACCTCGGCGAAATCACCCTCTGGTCCGGCGTGGCCACCGTCTCTGCCGCCGCCTTGGCC
AGTCCTTCCGCGCAGGCTGCGTTGGGGTTGAGGGGGGGGATGGGCGTGCTGGTCACGACGGGCTTGGCGGCTTTG
AGTCCTGCCATGACGGCGTTCTTGCTTACCTGCGTTTCGGGCATTCCGCTTAGCGAGGGCAAGTATGATGAGCGG
TTCGGTCATCGGGAGGACTATAAGGCTTGGAGGAGGGGGACGGCGAGGTTGCTTCCTGGTATTTATTGA
Transcript >Ophcf2|01514
ATGTACGAAGTACACAGCTCCACAACCCTCCTCCCCACCGCCCTCACGGCCTTCGCCCTGCAAGCCGCCGTCGGC
ATCCCCTCCGCCGCCGCAGCCACGGAGCGCTTCTACGACATCTCGGGCTCGGCCACCGTGCTGGCCGTCGGCGCT
CTCGGCCTGTGTCTTCCCAGCTTGAGGGCCGAGGGCCGCTGGGTCGGGTGGAGGGCTGTGCTTGCGGGGAGGGCG
TGGGGCCAGATTGCTGTCACGGCTATGGCGGTCGTGTGGACGTGTCGTCTCGGGTCGTATCTCTTTCAGAGGGTC
CTTTCAGAGGGCAAGGATTCGCGGTTCGATAAGATGAGGGAGCGGCCTGCGCTGATGCTAGCTGCCTTTGCGGCC
CAGGCTTGCTGGGTAGCAGCGATAATGACGCCCGTCATAGCCCTAAACGCCTGTCCGCCCACGGCCCTCCCCCCC
CTAGGAGCCATCCAAGCCCTCGGCTTCATCCTCTGGGCCGGCGGCATGACTCTCGAAGTCGTGGCCGACGGCCAA
AAAGGAAAATGGCTGCAAGGCCGCCGTCAAAAACAACACGACGAGCCCTTTCTCTCCTCGGGCCTATACTCCTTC
TGCCGCTTCCCAAACTACCTCGGCGAAATCACCCTCTGGTCCGGCGTGGCCACCGTCTCTGCCGCCGCCTTGGCC
AGTCCTTCCGCGCAGGCTGCGTTGGGGTTGAGGGGGGGGATGGGCGTGCTGGTCACGACGGGCTTGGCGGCTTTG
AGTCCTGCCATGACGGCGTTCTTGCTTACCTGCGTTTCGGGCATTCCGCTTAGCGAGGGCAAGTATGATGAGCGG
TTCGGTCATCGGGAGGACTATAAGGCTTGGAGGAGGGGGACGGCGAGGTTGCTTCCTGGTATTTATTGA
Gene >Ophcf2|01514
ATGTACGAAGTACACAGCTCCAGTACGTCCTCACAACACCATCGTATCCCAACCCAACCGCACCTCTCCGCTCCT
CACCCAACTCCCCACCTCCTCACCACCAAAATGACTCTCCTCCAAGGCCTCCTCCGCCTGACAAGCCACCGCTCC
CCCTCCTAGCAACCCTCCTCCCCACCGCCCTCACGGCCTTCGCCCTGCAAGCCGCCGTCGGCATCCCCTCCGCCG
CCGCAGCCACGGAGCGCTTCTACGACATCTCGGGCTCGGCCACCGTGCTGGCCGTCGGCGCTCTCGGCCTGTGTC
TTCCCAGCTTGAGGGCCGAGGGCCGCTGGGTCGGGTGGAGGGCTGTGCTTGCGGGGAGGGCGTGGGGCCAGATTG
CTGTCACGGCTATGGCGGTCGTGTGGACGTGTCGTCGTGAGTTCTCCGTGGTGGGGGCTTGTGCGCGGGAACGGA
TGATGATGCTGATGATGGGGTGTTTCAGTCGGGTCGTATCTCTTTCAGAGGGTCCTTTCAGAGGGCAAGGATTCG
CGGTTCGATAAGATGAGGGAGCGGCCTGCGCTGATGCTAGCTGCCTTTGCGGCCCAGGCTTGCTGGGTAGCAGCG
ATAATGACGCCCGTCATAGCCCTAAACGCCTGTCCGCCCACGGCCCTCCCCCCCCTAGGAGCCATCCAAGCCCTC
GGCTTCATCCTCTGGGCCGGCGGCATGACTCTCGAAGTCGTGGCCGACGGCCAAAAAGGAAAATGGCTGCAAGGC
CGCCGTCAAAAACAACACGACGAGCCCTTTCTCTCCTCGGGCCTATACTCCTTCTGCCGCTTCCCAAACTACCTC
GGCGAAATCACCCTCTGGTCCGGCGTGGCCACCGTCTCTGCCGCCGCCTTGGCCAGTCCTTCCGCGCAGGCTGCG
TTGGGGTTGAGGGGGGGGATGGGCGTGCTGGTCACGACGGGCTTGGCGGCTTTGAGTCCTGCCATGACGGCGTTC
TTGCTTACCTGCGTTTCGGGCATTCCGCTTAGCGAGGGCAAGTATGATGAGCGGTTCGGTCATCGGGAGGACTAT
AAGGCTTGGAGGAGGGGGACGGCGAGGTTGCTTCCTGGTATTTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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