Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01474
Gene name
Locationscaffold_01:5099758..5101836
Strand+
Gene length (bp)2078
Transcript length (bp)1650
Coding sequence length (bp)1650
Protein length (aa) 550

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 46 68 22
3 111 131 20
4 146 168 22
5 189 211 22
6 216 238 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01474
MANLDNGQVVAAVVFFGIVIVATLATAPIYLRHLHKPLDRDGPRLVLVGYLLAILAWAIVGLIATVAITRDVSSC
QVAVVFFAIFDQLARFLLEEFIFWTIDDHIRLTPQVFLFQGVFLARFVLGAVFVAVQRPQIEPVCSASTMILALA
IVVLVADAVVACMLLYRAYWTGILRDLPDKSMLGSRSRALLLLILGLVVWTGLSIPMILGINSIELVFRLVLPAI
GSLIVLGLLAIFRRSLGSSQPGRLPSYPFNRELSSRGISSSQSAKPLASDGSSFTDKSTLKEGKSGLPFIGQPIP
QGVPTTAKSFEAPRSGNTGLQDGLKGGLKGGRKNISKPIPHSEGVLAVKVPTIDLATAAKMERERRERDVVETAA
DPSSNPMTVFEALTSNGMRNETRGPNSKESTMLTTNDDHGSSQRVQSVDESQGQTTSAQPSPGADTIRRRSAERE
TQDTFGLRLLAEASNNAMAFLDSPTPTAPKTIDGRLSSTLYNAKPVFVHVIKTVAASAVSGKLLGSASASTDSST
PAAVTKEEPLVCGDDSCNAGIVTA*
Coding >Ophcf2|01474
ATGGCGAACCTGGACAACGGTCAAGTCGTGGCCGCTGTCGTCTTCTTCGGCATCGTCATTGTAGCCACTCTCGCG
ACCGCCCCCATTTATCTCAGGCATCTTCACAAGCCACTCGATCGAGATGGACCGAGGCTGGTCCTCGTTGGATAT
CTCTTGGCGATCCTGGCTTGGGCAATCGTCGGCTTAATTGCCACCGTCGCCATAACAAGAGATGTCTCTTCATGT
CAAGTCGCAGTCGTTTTCTTCGCCATCTTCGACCAGCTGGCTCGCTTTCTGCTGGAGGAATTCATCTTCTGGACA
ATCGACGACCATATCCGGCTCACTCCGCAGGTTTTTCTCTTCCAGGGCGTTTTTCTTGCGCGATTCGTCCTCGGC
GCAGTCTTCGTCGCCGTTCAGAGACCCCAGATTGAGCCTGTCTGCTCAGCCTCGACTATGATCTTGGCACTGGCC
ATCGTCGTCCTCGTCGCTGACGCCGTCGTGGCCTGCATGCTCTTGTATCGGGCATACTGGACCGGCATCCTCCGA
GACTTGCCTGATAAATCTATGCTTGGTTCCCGGAGTCGGGCTTTGTTGCTGCTCATCTTGGGGCTTGTCGTGTGG
ACTGGTCTGAGTATTCCCATGATTCTGGGAATCAACTCAATCGAGCTGGTTTTTCGGCTCGTACTTCCTGCTATC
GGCTCGCTCATCGTCCTCGGCCTCCTTGCCATCTTCAGACGCAGTCTCGGATCAAGCCAGCCTGGTCGATTGCCC
AGCTACCCTTTCAACCGCGAACTGTCGAGCCGAGGCATCTCTTCCAGCCAGTCTGCGAAGCCTCTCGCCAGCGAC
GGAAGTTCGTTCACGGACAAATCGACGCTGAAGGAAGGGAAGAGTGGCCTGCCTTTTATCGGCCAACCAATCCCT
CAGGGAGTCCCCACGACAGCGAAGAGTTTCGAAGCGCCGAGGAGCGGCAACACTGGCCTGCAGGATGGCCTAAAG
GGTGGCCTGAAGGGTGGCAGGAAAAACATTTCGAAACCGATACCTCATAGCGAAGGTGTGCTGGCAGTCAAAGTC
CCGACTATCGACTTGGCTACTGCGGCAAAGATGGAGAGGGAGCGAAGAGAGAGAGATGTCGTTGAAACTGCCGCT
GATCCGTCCTCGAATCCTATGACGGTGTTTGAAGCACTAACGTCCAACGGGATGCGCAATGAGACACGGGGCCCC
AATAGTAAGGAGTCGACCATGCTTACTACCAATGACGACCATGGCAGCAGCCAGCGAGTTCAATCAGTCGATGAG
TCTCAGGGACAGACGACTTCTGCTCAACCTTCTCCCGGCGCAGATACGATACGGCGTCGATCGGCCGAACGAGAG
ACGCAAGACACGTTCGGACTACGGCTCCTCGCTGAAGCCTCGAATAATGCAATGGCCTTTCTCGACTCTCCGACA
CCTACGGCTCCCAAAACCATCGACGGCAGACTCTCTTCGACGCTCTATAACGCAAAGCCAGTCTTCGTCCATGTC
ATCAAGACAGTCGCCGCCAGCGCCGTCTCCGGTAAACTTTTGGGCTCCGCCAGCGCCAGCACCGACTCAAGCACC
CCCGCCGCCGTCACCAAGGAGGAGCCCCTGGTCTGTGGTGACGACTCATGCAATGCCGGCATCGTCACCGCCTAA
Transcript >Ophcf2|01474
ATGGCGAACCTGGACAACGGTCAAGTCGTGGCCGCTGTCGTCTTCTTCGGCATCGTCATTGTAGCCACTCTCGCG
ACCGCCCCCATTTATCTCAGGCATCTTCACAAGCCACTCGATCGAGATGGACCGAGGCTGGTCCTCGTTGGATAT
CTCTTGGCGATCCTGGCTTGGGCAATCGTCGGCTTAATTGCCACCGTCGCCATAACAAGAGATGTCTCTTCATGT
CAAGTCGCAGTCGTTTTCTTCGCCATCTTCGACCAGCTGGCTCGCTTTCTGCTGGAGGAATTCATCTTCTGGACA
ATCGACGACCATATCCGGCTCACTCCGCAGGTTTTTCTCTTCCAGGGCGTTTTTCTTGCGCGATTCGTCCTCGGC
GCAGTCTTCGTCGCCGTTCAGAGACCCCAGATTGAGCCTGTCTGCTCAGCCTCGACTATGATCTTGGCACTGGCC
ATCGTCGTCCTCGTCGCTGACGCCGTCGTGGCCTGCATGCTCTTGTATCGGGCATACTGGACCGGCATCCTCCGA
GACTTGCCTGATAAATCTATGCTTGGTTCCCGGAGTCGGGCTTTGTTGCTGCTCATCTTGGGGCTTGTCGTGTGG
ACTGGTCTGAGTATTCCCATGATTCTGGGAATCAACTCAATCGAGCTGGTTTTTCGGCTCGTACTTCCTGCTATC
GGCTCGCTCATCGTCCTCGGCCTCCTTGCCATCTTCAGACGCAGTCTCGGATCAAGCCAGCCTGGTCGATTGCCC
AGCTACCCTTTCAACCGCGAACTGTCGAGCCGAGGCATCTCTTCCAGCCAGTCTGCGAAGCCTCTCGCCAGCGAC
GGAAGTTCGTTCACGGACAAATCGACGCTGAAGGAAGGGAAGAGTGGCCTGCCTTTTATCGGCCAACCAATCCCT
CAGGGAGTCCCCACGACAGCGAAGAGTTTCGAAGCGCCGAGGAGCGGCAACACTGGCCTGCAGGATGGCCTAAAG
GGTGGCCTGAAGGGTGGCAGGAAAAACATTTCGAAACCGATACCTCATAGCGAAGGTGTGCTGGCAGTCAAAGTC
CCGACTATCGACTTGGCTACTGCGGCAAAGATGGAGAGGGAGCGAAGAGAGAGAGATGTCGTTGAAACTGCCGCT
GATCCGTCCTCGAATCCTATGACGGTGTTTGAAGCACTAACGTCCAACGGGATGCGCAATGAGACACGGGGCCCC
AATAGTAAGGAGTCGACCATGCTTACTACCAATGACGACCATGGCAGCAGCCAGCGAGTTCAATCAGTCGATGAG
TCTCAGGGACAGACGACTTCTGCTCAACCTTCTCCCGGCGCAGATACGATACGGCGTCGATCGGCCGAACGAGAG
ACGCAAGACACGTTCGGACTACGGCTCCTCGCTGAAGCCTCGAATAATGCAATGGCCTTTCTCGACTCTCCGACA
CCTACGGCTCCCAAAACCATCGACGGCAGACTCTCTTCGACGCTCTATAACGCAAAGCCAGTCTTCGTCCATGTC
ATCAAGACAGTCGCCGCCAGCGCCGTCTCCGGTAAACTTTTGGGCTCCGCCAGCGCCAGCACCGACTCAAGCACC
CCCGCCGCCGTCACCAAGGAGGAGCCCCTGGTCTGTGGTGACGACTCATGCAATGCCGGCATCGTCACCGCCTAA
Gene >Ophcf2|01474
ATGGCGAACCTGGACAACGGTCAAGTCGTGGCCGCTGTCGTCTTCTTGTGCGTTTCTCTTCCTGTCACCGATGAA
GCAGACTTTACTGACTTTGCTTTCTTCGCGATCCAGCGGCATCGTCATTGTAGCCACTCTCGCGACCGCCCCCAT
TTATCTCAGGCATCTTCACAAGCCACTCGATCGAGATGGACCGAGGCTGGTCCTCGTTGGATATCTCTTGGCGAT
CCTGGCTTGGGCAATCGTCGGCTTAATTGCCACCGTCGCCATAACAAGAGATGTCTCTTCATGTCAAGTCGCAGT
CGTTTTCTTCGCCATCTTCGACCAGCTGGCTCGCTTTCTGCTGGAGGAATTCATCTTCTGGACAATCGACGACCA
TATCCGGCTCACTCCGCAGGTTTTTCTCTTCCAGGGCGTTTTTCTTGCGCGATTCGTCCTCGGCGCAGTCTTCGT
CGCCGTTCAGAGACCCCAGATTGAGCCTGTCTGCTCAGCCTCGACTATGATCTTGGCACTGGCCATCGTCGTCCT
CGTCGCTGACGCCGTCGTGGCCTGCATGCTCTTGTATCGGGCATACTGGACCGGCATCCTCCGAGACTTGCCTGA
TAAATCTATGCTTGGTTCCCGGAGTCGGGCTTTGTTGCTGCTCATCTTGGGGCTTGTCGTGTGGACTGGTGTGAG
TACTTCCAACCTTGAGATATTTGTTCCTGCTGACCTTTTGGCTGTAGCTGAGTATTCCCATGATTCTGGGAATCA
ACTCAATCGAGCTGGTTTTTCGGCTCGTACTTCCTGCTATCGGCTCGCTCATCGTCCTCGGTAGGTGTTTGGTCA
TGGTTTCTTTGGCTCATGTATTGATTCTTCATGACAGGCCTCCTTGCCATCTTCAGACGCAGTCTCGGATCAAGC
CAGCCTGGTCGATTGCCCAGCTACCCTTTCAACCGCGAACTGTCGAGCCGAGGCATCTCTTCCAGCCAGTCTGCG
AAGCCTCTCGCCAGCGACGGAAGTTCGTTCACGGACAAATCGACGCTGAAGGAAGGGAAGAGTGGCCTGCCTTTT
ATCGGCCAACCAATCCCTCAGGGAGTCCCCACGACAGCGAAGAGTTTCGAAGCGCCGAGGAGCGGCAACACTGGC
CTGCAGGATGGCCTAAAGGGTGGCCTGAAGGGTGGCAGGAAAAACATTTCGAAACCGATACCTCATAGCGAAGGT
GTGCTGGCAGTCAAAGTCCCGACTATCGACTTGGCTACTGCGGCAAAGATGGAGAGGGAGCGAAGAGAGAGAGAT
GTCGTTGAAACTGCCGCTGATCCGTCCTCGAATCCTATGACGGTGTTTGAAGCACTAACGTCCAACGGGATGCGC
AATGAGACACGGGGCCCCAATAGTAAGGAGTCGACCATGCTTACTACCAATGACGACCATGGCAGCAGCCAGCGA
GTTCAATCAGTCGATGAGTCTCAGGGACAGACGACTTCTGCTCAACCTTCTCCCGGCGCAGATACGATACGGCGT
CGATCGGCCGAACGAGAGACGCAAGACACGTTCGGACTACGGCTCCTCGCTGAAGCCTCGAATAATGCAATGGCC
TTTCTCGACTCTCCGACACCTACGGGTGCCTTTCCAACGAAGACTGATCAGATGTCTCCCGCCATTGACGTGGTT
GAACAGCTCCCAAAACCATCGACGGCAGACTCTCTTCGACGCTCTATAACGCAAAGCCAGGTTTATACGGATCCG
AACCCGCCGCCCTCGATACCGAGAAAGTTCTCGGACGAAAGCGAAACAGTCGACGTCTTGGTTCCTCCGGCTAGG
CCAGTATCGCCGATCAGAAGCGTTTCCACAGCAAGCCCTGACTCGACGGAGGAGGTGATGAACAAGGCTCAACCG
ATGATGCCAAAGCCTCGATCTCCTGAGTCTCCCGCAAAGTCTTCGTCCATGTCATCAAGACAGTCGCCGCCAGCG
CCGTCTCCGGTAAACTTTTGGGCTCCGCCAGCGCCAGCACCGACTCAAGCACCCCCGCCGCCGTCACCAAGGAGG
AGCCCCTGGTCTGTGGTGACGACTCATGCAATGCCGGCATCGTCACCGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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