Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01464
Gene name
Locationscaffold_01:5072582..5073367
Strand+
Gene length (bp)785
Transcript length (bp)696
Coding sequence length (bp)696
Protein length (aa) 232

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08651 DASH_Duo1 DASH complex subunit Duo1 5.2E-27 50 122

GO

GO Term Description Terminal node
GO:0072686 mitotic spindle Yes
GO:0042729 DASH complex Yes
GO:0000278 mitotic cell cycle Yes
GO:0005575 cellular_component No
GO:0007049 cell cycle No
GO:0043232 intracellular non-membrane-bounded organelle No
GO:0005819 spindle No
GO:0043228 non-membrane-bounded organelle No
GO:0043229 intracellular organelle No
GO:0043226 organelle No
GO:0008150 biological_process No
GO:0032991 protein-containing complex No
GO:0009987 cellular process No
GO:0140513 nuclear protein-containing complex No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.2402 0.7016 0.0097 0.0344 0.2358 0.0021 0.1069 0.0298 0.0601 0.0018

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3328
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6457
Ophiocordyceps australis map64 (Brazil) OphauB2|2553
Ophiocordyceps camponoti-floridani Ophcf2|01464 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|2714
Ophiocordyceps kimflemingae Ophio5|3838
Ophiocordyceps subramaniannii Hirsu2|6155

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01464
MTDEATLDDVWASPTQVVSSDVRPKTPKTPGTPKTPSADRQPEPVDRDAALQRELEGVRGINKSIEAVLATLGRS
GDNMEVVSKTVSNASSLLNTWTRILSQTEHNQRLILHPSWKGATEDLVEQEAEALERQRQAERKAAEEEQKLQEL
RRRREEDEDKRRLGASSSSRGTRGSSRTRGTTGRGATGTRGGTSSTYRSDTTRPGTQSGRGPLSSRGRASSSGRG
RSRPTR*
Coding >Ophcf2|01464
ATGACAGACGAAGCCACTCTCGACGACGTATGGGCGTCACCCACGCAAGTCGTCTCCTCTGACGTCCGTCCAAAG
ACGCCCAAGACCCCCGGCACCCCCAAGACGCCATCGGCCGACCGACAGCCCGAGCCAGTTGACCGCGATGCAGCT
CTCCAGAGAGAGCTAGAGGGCGTCCGTGGCATCAACAAATCCATCGAGGCCGTCCTTGCAACCCTGGGTCGTTCC
GGGGATAACATGGAGGTCGTCTCTAAAACAGTCTCCAACGCCTCCTCCCTGCTCAACACCTGGACCCGGATCCTG
TCCCAGACTGAGCACAATCAACGACTCATCCTCCACCCGAGCTGGAAAGGCGCCACCGAAGACCTTGTCGAACAG
GAGGCCGAGGCGCTGGAAAGGCAGCGTCAGGCGGAACGCAAGGCCGCCGAGGAGGAGCAGAAGCTTCAAGAGCTG
CGTCGTCGGCGTGAAGAGGATGAGGACAAGAGACGGTTGGGCGCCTCGTCTTCCTCTCGCGGTACCAGAGGCTCT
TCAAGAACACGCGGGACGACCGGTCGTGGCGCAACCGGCACCAGAGGCGGCACGAGCTCGACTTATCGATCGGAC
ACTACCAGGCCAGGCACCCAGAGCGGGCGCGGTCCCTTGTCCAGTCGCGGCCGCGCCTCTTCATCGGGAAGAGGA
CGCTCACGACCGACGAGATAG
Transcript >Ophcf2|01464
ATGACAGACGAAGCCACTCTCGACGACGTATGGGCGTCACCCACGCAAGTCGTCTCCTCTGACGTCCGTCCAAAG
ACGCCCAAGACCCCCGGCACCCCCAAGACGCCATCGGCCGACCGACAGCCCGAGCCAGTTGACCGCGATGCAGCT
CTCCAGAGAGAGCTAGAGGGCGTCCGTGGCATCAACAAATCCATCGAGGCCGTCCTTGCAACCCTGGGTCGTTCC
GGGGATAACATGGAGGTCGTCTCTAAAACAGTCTCCAACGCCTCCTCCCTGCTCAACACCTGGACCCGGATCCTG
TCCCAGACTGAGCACAATCAACGACTCATCCTCCACCCGAGCTGGAAAGGCGCCACCGAAGACCTTGTCGAACAG
GAGGCCGAGGCGCTGGAAAGGCAGCGTCAGGCGGAACGCAAGGCCGCCGAGGAGGAGCAGAAGCTTCAAGAGCTG
CGTCGTCGGCGTGAAGAGGATGAGGACAAGAGACGGTTGGGCGCCTCGTCTTCCTCTCGCGGTACCAGAGGCTCT
TCAAGAACACGCGGGACGACCGGTCGTGGCGCAACCGGCACCAGAGGCGGCACGAGCTCGACTTATCGATCGGAC
ACTACCAGGCCAGGCACCCAGAGCGGGCGCGGTCCCTTGTCCAGTCGCGGCCGCGCCTCTTCATCGGGAAGAGGA
CGCTCACGACCGACGAGATAG
Gene >Ophcf2|01464
ATGACAGACGAAGCCACTCTCGACGACGTATGGGCGTCACCCACGCAAGTCGTCTCCTCTGACGTCCGTCCAAAG
ACGCCCAAGACCCCCGGCACCCCCAAGACGCCATCGGCCGACCGACAGCCCGAGCCAGTTGACCGCGATGCAGCT
CTCCAGAGAGAGCTAGAGGGCGTCCGTGGCATCAACAAATCCATCGAGGCCGTCCTTGCAACCCTGGGTCGTTCC
GGGGATAACATGGAGGTAAGAGAAGCTCGCCACGATGAATCACAAAAAAAATAAAAAAAAATCCCACACGAGGAT
CGGCGGACCCCTTCTGACCCCTTGTCAAGGTCGTCTCTAAAACAGTCTCCAACGCCTCCTCCCTGCTCAACACCT
GGACCCGGATCCTGTCCCAGACTGAGCACAATCAACGACTCATCCTCCACCCGAGCTGGAAAGGCGCCACCGAAG
ACCTTGTCGAACAGGAGGCCGAGGCGCTGGAAAGGCAGCGTCAGGCGGAACGCAAGGCCGCCGAGGAGGAGCAGA
AGCTTCAAGAGCTGCGTCGTCGGCGTGAAGAGGATGAGGACAAGAGACGGTTGGGCGCCTCGTCTTCCTCTCGCG
GTACCAGAGGCTCTTCAAGAACACGCGGGACGACCGGTCGTGGCGCAACCGGCACCAGAGGCGGCACGAGCTCGA
CTTATCGATCGGACACTACCAGGCCAGGCACCCAGAGCGGGCGCGGTCCCTTGTCCAGTCGCGGCCGCGCCTCTT
CATCGGGAAGAGGACGCTCACGACCGACGAGATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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