Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01450
Gene name
Locationscaffold_01:5032391..5033155
Strand+
Gene length (bp)764
Transcript length (bp)450
Coding sequence length (bp)450
Protein length (aa) 150

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10233 Cg6151-P Uncharacterized conserved protein CG6151-P 1.5E-38 19 131

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 40 62 22
3 83 105 22
4 109 128 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01450
MSLKEEFQTRNFSIYGQWLGILSMFICLATGISTIFTFSIALIIFCAFAIASSFLILFIEVPLLLRICPTSGKFD
EFVRKISTNYMRAAAYLTMSVIQFISAAFGKSALIAAAVFLLLTFICYLLAAIKGQDFVGSKTLGGQGVAQMIV*
Coding >Ophcf2|01450
ATGTCGCTCAAGGAAGAGTTCCAGACGCGGAATTTTAGCATCTACGGTCAATGGCTGGGCATCCTGTCCATGTTC
ATTTGCCTCGCGACGGGGATTTCGACCATATTTACCTTTAGCATCGCCCTCATCATCTTTTGCGCCTTTGCCATT
GCATCGTCTTTCCTCATCCTGTTCATCGAGGTCCCTCTCCTGCTACGAATCTGCCCGACGTCCGGCAAGTTCGAT
GAGTTTGTGCGCAAGATCTCGACCAACTACATGCGCGCAGCCGCCTACTTGACCATGTCGGTGATTCAGTTCATC
AGCGCAGCCTTTGGCAAGAGCGCCCTGATCGCTGCCGCCGTCTTCCTACTCCTCACCTTTATCTGCTACCTGCTC
GCCGCTATCAAGGGACAAGACTTTGTCGGCAGCAAGACGTTGGGCGGCCAAGGCGTTGCGCAGATGATAGTTTGA
Transcript >Ophcf2|01450
ATGTCGCTCAAGGAAGAGTTCCAGACGCGGAATTTTAGCATCTACGGTCAATGGCTGGGCATCCTGTCCATGTTC
ATTTGCCTCGCGACGGGGATTTCGACCATATTTACCTTTAGCATCGCCCTCATCATCTTTTGCGCCTTTGCCATT
GCATCGTCTTTCCTCATCCTGTTCATCGAGGTCCCTCTCCTGCTACGAATCTGCCCGACGTCCGGCAAGTTCGAT
GAGTTTGTGCGCAAGATCTCGACCAACTACATGCGCGCAGCCGCCTACTTGACCATGTCGGTGATTCAGTTCATC
AGCGCAGCCTTTGGCAAGAGCGCCCTGATCGCTGCCGCCGTCTTCCTACTCCTCACCTTTATCTGCTACCTGCTC
GCCGCTATCAAGGGACAAGACTTTGTCGGCAGCAAGACGTTGGGCGGCCAAGGCGTTGCGCAGATGATAGTTTGA
Gene >Ophcf2|01450
ATGTCGCTCAAGGAAGAGTTCCAGACGCGGAATTTTAGTTCGTCACAGCTCCCCTGACGCTGGCTCATCCTCCGC
TGGGAGAGGAGGCCTGCGCGCAATCCGCCGTCTTTGCTGACACTTGCCGTTTTGTCCAGGCATCTACGGTCAATG
GTAAGCTCGCCACCGGAGTCCTCGCACCTCCAAGCTTCCCTCTACGCGCCCTTGTTCTCGAGAGCGCTTCCTTTC
CCGCGAGTCGAGCTCGAGTCCTTCGCGCCGAGCCTGTGGCCCCGCCTTGAATCCCCCGAGCTCTGGTAGCTGATG
TGCGCATTCCAGGCTGGGCATCCTGTCCATGTTCATTTGCCTCGCGACGGGGATTTCGACCATATTTACCTTTAG
CATCGCCCTCATCATCTTTTGCGCCTTTGCCATGTACGAGCTCGCCCTGACGACAGACTTTGGACCTTTTACTGA
CGCGCGCTCACAGTGCATCGTCTTTCCTCATCCTGTTCATCGAGGTCCCTCTCCTGCTACGAATCTGCCCGACGT
CCGGCAAGTTCGATGAGTTTGTGCGCAAGATCTCGACCAACTACATGCGCGCAGCCGCCTACTTGACCATGTCGG
TGATTCAGTTCATCAGCGCAGCCTTTGGCAAGAGCGCCCTGATCGCTGCCGCCGTCTTCCTACTCCTCACCTTTA
TCTGCTACCTGCTCGCCGCTATCAAGGGACAAGACTTTGTCGGCAGCAAGACGTTGGGCGGCCAAGGCGTTGCGC
AGATGATAGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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