© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01448 |
| Gene name | |
| Location | scaffold_01:5027907..5029378 |
| Strand | + |
| Gene length (bp) | 1471 |
| Transcript length (bp) | 1260 |
| Coding sequence length (bp) | 1260 |
| Protein length (aa) | 420 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00108 | Thiolase_N | Thiolase, N-terminal domain | 3.3E-70 | 34 | 289 |
| PF02803 | Thiolase_C | Thiolase, C-terminal domain | 1.8E-41 | 298 | 415 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01448 MGALERLSQIGGQLSANISGSGRQRLLEKRSDDVVVVACCRSAFTKGGKGGFKDTQAADIMAGVLRAVADRARID KALVEDICVGTVLAPGGGATEMRAASLVAGYPETTAVRTLNRQCSSGLQACVDVANQIKTGMIEVGIGAGVESMS LHYGPSAVTEFSEGFENNTEAANCKVPMGVLSEDMAKDLNISRADQDAFAASSYQKAVQAQRQGLFDEEIVPLKA RYEDAKSGETKEITVAKDDGIRDGITVESLGKIRPAFAADGSIHAGNASQISDGAAAVLMMRRSTSERLGLSPIG KFVCAAVVGVKPLLMGQGPWKAIPRALDLAGITKDDVDIYEINEAFASQCLWCANQLGIPHEKINPKGGAIAFGH PLGCTGARQVSTLLYELRRTGKKVGNTSMCVGTGMGMSAVWVAE* |
| Coding | >Ophcf2|01448 ATGGGCGCTCTTGAGAGACTCTCGCAGATCGGCGGACAGCTGTCAGCCAACATCTCCGGCAGCGGCCGTCAACGA CTCCTGGAGAAGCGATCCGACGATGTCGTCGTCGTAGCCTGCTGCCGAAGCGCCTTCACCAAAGGCGGAAAGGGC GGCTTCAAAGACACCCAGGCCGCCGACATCATGGCCGGTGTCCTACGGGCCGTGGCAGACCGGGCACGCATCGAC AAGGCGCTCGTCGAGGACATTTGCGTCGGCACCGTCTTGGCTCCCGGAGGGGGCGCCACGGAGATGCGGGCTGCC AGTCTCGTAGCCGGCTATCCCGAGACGACGGCGGTGCGGACGCTGAACCGTCAGTGTTCTTCCGGTCTTCAGGCT TGCGTCGATGTTGCGAATCAGATCAAGACGGGCATGATTGAGGTTGGTATCGGTGCTGGTGTTGAGAGCATGTCT CTCCATTACGGACCCTCTGCCGTCACCGAGTTCTCCGAAGGCTTCGAAAACAACACCGAGGCCGCCAACTGCAAG GTCCCCATGGGCGTCCTCTCAGAAGACATGGCCAAGGACCTCAACATCTCGCGAGCCGACCAAGACGCCTTCGCC GCATCCTCTTATCAAAAGGCCGTCCAGGCCCAACGCCAAGGCCTCTTCGACGAGGAAATCGTCCCGCTCAAGGCC CGGTACGAGGACGCCAAGTCTGGCGAGACCAAGGAAATCACCGTGGCCAAAGACGACGGCATCCGCGACGGCATC ACCGTCGAGTCGCTGGGGAAGATCCGTCCGGCCTTTGCGGCAGACGGGAGTATTCACGCCGGCAACGCGAGTCAG ATTTCTGATGGCGCCGCCGCCGTCCTCATGATGCGTCGCTCTACATCCGAAAGACTCGGTCTGTCCCCCATTGGC AAGTTTGTCTGCGCCGCCGTCGTTGGCGTCAAGCCGCTCCTCATGGGTCAGGGCCCCTGGAAGGCCATTCCGAGA GCTCTCGACTTGGCTGGCATCACCAAGGATGACGTGGACATCTACGAGATCAACGAGGCTTTCGCGAGCCAGTGT CTGTGGTGCGCCAACCAACTTGGCATCCCGCATGAAAAGATCAATCCCAAGGGCGGCGCCATTGCATTTGGTCAC CCGCTCGGCTGCACCGGAGCCCGTCAGGTCTCGACGCTCCTGTACGAGCTCAGGAGGACGGGCAAGAAGGTGGGC AACACGTCCATGTGCGTGGGCACAGGCATGGGGATGAGTGCCGTTTGGGTAGCCGAATAA |
| Transcript | >Ophcf2|01448 ATGGGCGCTCTTGAGAGACTCTCGCAGATCGGCGGACAGCTGTCAGCCAACATCTCCGGCAGCGGCCGTCAACGA CTCCTGGAGAAGCGATCCGACGATGTCGTCGTCGTAGCCTGCTGCCGAAGCGCCTTCACCAAAGGCGGAAAGGGC GGCTTCAAAGACACCCAGGCCGCCGACATCATGGCCGGTGTCCTACGGGCCGTGGCAGACCGGGCACGCATCGAC AAGGCGCTCGTCGAGGACATTTGCGTCGGCACCGTCTTGGCTCCCGGAGGGGGCGCCACGGAGATGCGGGCTGCC AGTCTCGTAGCCGGCTATCCCGAGACGACGGCGGTGCGGACGCTGAACCGTCAGTGTTCTTCCGGTCTTCAGGCT TGCGTCGATGTTGCGAATCAGATCAAGACGGGCATGATTGAGGTTGGTATCGGTGCTGGTGTTGAGAGCATGTCT CTCCATTACGGACCCTCTGCCGTCACCGAGTTCTCCGAAGGCTTCGAAAACAACACCGAGGCCGCCAACTGCAAG GTCCCCATGGGCGTCCTCTCAGAAGACATGGCCAAGGACCTCAACATCTCGCGAGCCGACCAAGACGCCTTCGCC GCATCCTCTTATCAAAAGGCCGTCCAGGCCCAACGCCAAGGCCTCTTCGACGAGGAAATCGTCCCGCTCAAGGCC CGGTACGAGGACGCCAAGTCTGGCGAGACCAAGGAAATCACCGTGGCCAAAGACGACGGCATCCGCGACGGCATC ACCGTCGAGTCGCTGGGGAAGATCCGTCCGGCCTTTGCGGCAGACGGGAGTATTCACGCCGGCAACGCGAGTCAG ATTTCTGATGGCGCCGCCGCCGTCCTCATGATGCGTCGCTCTACATCCGAAAGACTCGGTCTGTCCCCCATTGGC AAGTTTGTCTGCGCCGCCGTCGTTGGCGTCAAGCCGCTCCTCATGGGTCAGGGCCCCTGGAAGGCCATTCCGAGA GCTCTCGACTTGGCTGGCATCACCAAGGATGACGTGGACATCTACGAGATCAACGAGGCTTTCGCGAGCCAGTGT CTGTGGTGCGCCAACCAACTTGGCATCCCGCATGAAAAGATCAATCCCAAGGGCGGCGCCATTGCATTTGGTCAC CCGCTCGGCTGCACCGGAGCCCGTCAGGTCTCGACGCTCCTGTACGAGCTCAGGAGGACGGGCAAGAAGGTGGGC AACACGTCCATGTGCGTGGGCACAGGCATGGGGATGAGTGCCGTTTGGGTAGCCGAATAA |
| Gene | >Ophcf2|01448 ATGGGCGGTACGGCTATTCCTTCTTCATACCATCTTGGATGTCTCCTTTTCAGCATCCGTCTCGTCTCACGTTCT TTCAGCCACGCTGACCGGAAACGCAGCTCTTGAGAGACTCTCGCAGATCGGCGGACAGCTGTCAGCCAACATCTC CGGCAGCGGCCGTCAACGACTCCTGGAGAAGCGATCCGACGATGTACGTCAATCCCGTCTCTGCTTCGCGATCCC TAGCCTGACGTTGCAACCAGGTCGTCGTCGTAGCCTGCTGCCGAAGCGCCTTCACCAAAGGCGGAAAGGGCGGCT TCAAAGACACCCAGGCCGCCGACATCATGGCCGGTGTCCTACGGGCCGTGGCAGACCGGGCACGCATCGACAAGG CGCTCGTCGAGGACATTTGCGTCGGCACCGTCTTGGCTCCCGGAGGGGGCGCCACGGAGATGCGGGCTGCCAGTC TCGTAGCCGGCTATCCCGAGACGACGGCGGTGCGGACGCTGAACCGTCAGTGTTCTTCCGGTCTTCAGGCTTGCG TCGATGTTGCGAATCAGATCAAGACGGGCATGATTGAGGTTGGTATCGGTGCTGGTGTTGAGAGCATGTCTCTCC ATTACGGGTACGTTGGCATCCTTCAACAACCCTGGCCAGTTCAAACCACTCAGTGATCCTGATACACTCCAGACC CTCTGCCGTCACCGAGTTCTCCGAAGGCTTCGAAAACAACACCGAGGCCGCCAACTGCAAGGTCCCCATGGGCGT CCTCTCAGAAGACATGGCCAAGGACCTCAACATCTCGCGAGCCGACCAAGACGCCTTCGCCGCATCCTCTTATCA AAAGGCCGTCCAGGCCCAACGCCAAGGCCTCTTCGACGAGGAAATCGTCCCGCTCAAGGCCCGGTACGAGGACGC CAAGTCTGGCGAGACCAAGGAAATCACCGTGGCCAAAGACGACGGCATCCGCGACGGCATCACCGTCGAGTCGCT GGGGAAGATCCGTCCGGCCTTTGCGGCAGACGGGAGTATTCACGCCGGCAACGCGAGTCAGATTTCTGATGGCGC CGCCGCCGTCCTCATGATGCGTCGCTCTACATCCGAAAGACTCGGTCTGTCCCCCATTGGCAAGTTTGTCTGCGC CGCCGTCGTTGGCGTCAAGCCGCTCCTCATGGGTCAGGGCCCCTGGAAGGCCATTCCGAGAGCTCTCGACTTGGC TGGCATCACCAAGGATGACGTGGACATCTACGAGATCAACGAGGCTTTCGCGAGCCAGTGTCTGTGGTGCGCCAA CCAACTTGGCATCCCGCATGAAAAGATCAATCCCAAGGGCGGCGCCATTGCATTTGGTCACCCGCTCGGCTGCAC CGGAGCCCGTCAGGTCTCGACGCTCCTGTACGAGCTCAGGAGGACGGGCAAGAAGGTGGGCAACACGTCCATGTG CGTGGGCACAGGCATGGGGATGAGTGCCGTTTGGGTAGCCGAATAA |