Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01436
Gene name
Locationscaffold_01:4995356..4996742
Strand+
Gene length (bp)1386
Transcript length (bp)1158
Coding sequence length (bp)1158
Protein length (aa) 386

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 173 195 22
3 210 232 22
4 237 259 22
5 269 291 22
6 304 326 22
7 339 361 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01436
MNFVTSVGWLTFAPITPSASRYYQTPASKIAWLSTAFLLSFLISTPPTILLLHRGPKPALVTAAVLIIVGNWVRY
AAGRSFAGAGEGRCHCCGEFGESVGGAVAQLVVSMVVKGEEQVLSLLLYVAIINPGKSTIASLPAFILPSRPPTP
ISASSTTAKLNLKASMRQLIRSPELFIVMVPFAVVVGFFNTLSSLLNQIMVPYGFTDDEAGIAGAILIFVGLVSA
AISSPLVDRTKAFVRSLKLLLPVIALCFVLFIWMPETRHLAGPYVVITVLGAASFASLPVALEFLAEVSHPLSPE
VTSTVAWAAGQLLGAVFIIISGALAGGPDADPPHNLKRALIFQGVVAATVCPLPLLLGLFGRQDKVALRRVDSDR
RDGAAADGPA*
Coding >Ophcf2|01436
ATGAACTTCGTCACCTCGGTCGGCTGGCTAACCTTCGCGCCCATCACCCCCTCAGCCTCACGATACTACCAAACC
CCAGCCTCGAAAATCGCCTGGCTAAGCACAGCCTTCCTGCTCTCCTTCCTCATCTCAACGCCGCCTACAATCCTC
CTTCTCCACCGCGGACCGAAACCGGCGCTTGTGACGGCGGCGGTGCTCATCATCGTCGGCAACTGGGTTCGGTAC
GCGGCGGGGAGGAGCTTTGCCGGGGCGGGGGAGGGTCGCTGCCACTGCTGTGGCGAGTTTGGCGAATCCGTTGGG
GGGGCCGTTGCGCAGCTTGTTGTTTCCATGGTTGTCAAGGGGGAGGAGCAGGTGTTGAGTCTGCTGCTCTATGTC
GCCATCATCAACCCCGGAAAGTCAACCATCGCATCCCTCCCAGCCTTCATCCTCCCTTCCCGCCCCCCAACTCCC
ATCTCAGCATCCAGCACGACAGCCAAGCTCAACCTCAAGGCCTCGATGCGTCAGCTGATTCGCTCGCCCGAGCTC
TTCATCGTCATGGTTCCCTTTGCCGTCGTCGTCGGCTTCTTCAACACCTTGTCTTCGCTGCTTAACCAGATCATG
GTCCCCTATGGCTTCACAGATGACGAGGCTGGCATTGCTGGCGCCATCCTCATATTCGTCGGTCTCGTCTCTGCA
GCTATCAGCTCGCCCCTCGTCGATCGGACAAAGGCCTTTGTTCGGAGTCTCAAGCTGTTGCTGCCCGTCATCGCC
CTCTGCTTCGTCCTCTTCATCTGGATGCCCGAGACTCGTCATCTGGCTGGACCCTACGTCGTCATCACCGTCCTC
GGCGCTGCCAGTTTCGCCTCCCTGCCCGTTGCCCTCGAGTTCCTCGCAGAAGTCAGCCACCCCCTGAGTCCCGAA
GTCACGTCCACCGTCGCCTGGGCTGCCGGTCAGCTGCTCGGTGCCGTCTTCATCATCATCAGCGGTGCCCTCGCC
GGCGGCCCGGATGCCGATCCTCCGCATAACCTTAAGCGTGCCCTCATCTTCCAGGGCGTCGTCGCCGCCACTGTC
TGTCCGCTCCCTCTTCTCCTTGGCCTCTTCGGTCGCCAAGATAAGGTGGCCCTGCGGCGCGTAGACTCGGATAGA
CGGGATGGCGCCGCAGCAGATGGCCCGGCATAG
Transcript >Ophcf2|01436
ATGAACTTCGTCACCTCGGTCGGCTGGCTAACCTTCGCGCCCATCACCCCCTCAGCCTCACGATACTACCAAACC
CCAGCCTCGAAAATCGCCTGGCTAAGCACAGCCTTCCTGCTCTCCTTCCTCATCTCAACGCCGCCTACAATCCTC
CTTCTCCACCGCGGACCGAAACCGGCGCTTGTGACGGCGGCGGTGCTCATCATCGTCGGCAACTGGGTTCGGTAC
GCGGCGGGGAGGAGCTTTGCCGGGGCGGGGGAGGGTCGCTGCCACTGCTGTGGCGAGTTTGGCGAATCCGTTGGG
GGGGCCGTTGCGCAGCTTGTTGTTTCCATGGTTGTCAAGGGGGAGGAGCAGGTGTTGAGTCTGCTGCTCTATGTC
GCCATCATCAACCCCGGAAAGTCAACCATCGCATCCCTCCCAGCCTTCATCCTCCCTTCCCGCCCCCCAACTCCC
ATCTCAGCATCCAGCACGACAGCCAAGCTCAACCTCAAGGCCTCGATGCGTCAGCTGATTCGCTCGCCCGAGCTC
TTCATCGTCATGGTTCCCTTTGCCGTCGTCGTCGGCTTCTTCAACACCTTGTCTTCGCTGCTTAACCAGATCATG
GTCCCCTATGGCTTCACAGATGACGAGGCTGGCATTGCTGGCGCCATCCTCATATTCGTCGGTCTCGTCTCTGCA
GCTATCAGCTCGCCCCTCGTCGATCGGACAAAGGCCTTTGTTCGGAGTCTCAAGCTGTTGCTGCCCGTCATCGCC
CTCTGCTTCGTCCTCTTCATCTGGATGCCCGAGACTCGTCATCTGGCTGGACCCTACGTCGTCATCACCGTCCTC
GGCGCTGCCAGTTTCGCCTCCCTGCCCGTTGCCCTCGAGTTCCTCGCAGAAGTCAGCCACCCCCTGAGTCCCGAA
GTCACGTCCACCGTCGCCTGGGCTGCCGGTCAGCTGCTCGGTGCCGTCTTCATCATCATCAGCGGTGCCCTCGCC
GGCGGCCCGGATGCCGATCCTCCGCATAACCTTAAGCGTGCCCTCATCTTCCAGGGCGTCGTCGCCGCCACTGTC
TGTCCGCTCCCTCTTCTCCTTGGCCTCTTCGGTCGCCAAGATAAGGTGGCCCTGCGGCGCGTAGACTCGGATAGA
CGGGATGGCGCCGCAGCAGATGGCCCGGCATAG
Gene >Ophcf2|01436
ATGAACTTCGTCACCTCGGTCGGCGTGCGTTCAAACCCCCTTCCTTCCCTCATCCAAGACGACAGGATCCCAAGA
CGAAAAAGCTAACAAACGACTTCAACCCCAGTGGCTAACCTTCGCGCCCATCACCCCCTCAGCCTCACGATACTA
CCAAACCCCAGCCTCGAAAATCGCCTGGCTAAGCACAGCCTTCCTGCTCTCCTTCCTCATCTCAACGCCGCCTAC
AATCCTCCTTCTCCACCGCGGACCGAAACCGGCGCTTGTGACGGCGGCGGTGCTCATCATCGTCGGCAACTGGGT
TCGGTACGCGGCGGGGAGGAGCTTTGCCGGTGCGCTGGCCGGACAGGTTGTTATTGGGCTGGCGCAGCCGTTTGT
TTTGGCGGCGCCGACCAGGTTCTCCGGTCTTTGGTTCAGGGGCGGGGGAGGGTCGCTGCCACTGCTGTGGCGAGT
TTGGCGAATCCGTTGGGGGGGCCGTTGCGCAGCTTGTTGTTTCCATGGTTGTCAAGGGGGAGGAGCAGGTGTTGA
GTCTGCTGCTCTATGTCGCCATCATCGTGAGTTCATTCTCAACCATCCCGACTGGGCTTTGAACAAGGAAACGAT
GGCTGATATCAGAACCCCGGAAAGTCAACCATCGCATCCCTCCCAGCCTTCATCCTCCCTTCCCGCCCCCCAACT
CCCATCTCAGCATCCAGCACGACAGCCAAGCTCAACCTCAAGGCCTCGATGCGTCAGCTGATTCGCTCGCCCGAG
CTCTTCATCGTCATGGTTCCCTTTGCCGTCGTCGTCGGCTTCTTCAACACCTTGTCTTCGCTGCTTAACCAGATC
ATGGTCCCCTATGGCTTCACAGATGACGAGGCTGGCATTGCTGGCGCCATCCTCATATTCGTCGGTCTCGTCTCT
GCAGCTATCAGCTCGCCCCTCGTCGATCGGACAAAGGCCTTTGTTCGGAGTCTCAAGCTGTTGCTGCCCGTCATC
GCCCTCTGCTTCGTCCTCTTCATCTGGATGCCCGAGACTCGTCATCTGGCTGGACCCTACGTCGTCATCACCGTC
CTCGGCGCTGCCAGTTTCGCCTCCCTGCCCGTTGCCCTCGAGTTCCTCGCAGAAGTCAGCCACCCCCTGAGTCCC
GAAGTCACGTCCACCGTCGCCTGGGCTGCCGGTCAGCTGCTCGGTGCCGTCTTCATCATCATCAGCGGTGCCCTC
GCCGGCGGCCCGGATGCCGATCCTCCGCATAACCTTAAGCGTGCCCTCATCTTCCAGGGCGTCGTCGCCGCCACT
GTCTGTCCGCTCCCTCTTCTCCTTGGCCTCTTCGGTCGCCAAGATAAGGTGGCCCTGCGGCGCGTAGACTCGGAT
AGACGGGATGGCGCCGCAGCAGATGGCCCGGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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