Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01429
Gene name
Locationscaffold_01:4981987..4983861
Strand+
Gene length (bp)1874
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01595 CNNM Cyclin M transmembrane N-terminal domain 4.5E-33 51 219

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 44 66 22
3 127 149 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01429
MRRHGTSAAFTNLRPVVLGLGRLMGVAAAPLVLPDDNHVRDTPIWVLALASMTLVLLGGAFAGLTIAFMGQDSIY
LQVLSGDPAEPQHRNAKSVLSLLKRGKHWVLVTLLLANVIVNESLPVVLDRTLGGGVAAVVGSTVLIVIFGEIVP
QSICVRFGLPIGGYMSKPVLLLMYLLSPVAWPTAKLLDWILGEDHGTVYKKSGLKTLVTLHKSLGDLSERLNQDE
VTIITAVLDLKDKPVSEVMTPMDDVFTLAEDHVLDEKTMDNILSSGYSRIPIYRAGNPTDFVGMLLVKTLITYDP
EDRIPVRDVQLGAIVETRPETSCLDIINFFQEGKSHMVLVSEYPGSDHGALGVVTLEDVIEELIGEEIVDESDVY
VDVHKAIRRLTPAPRARRHHHEDASSATSVTAVAVKKPADGSLLVDIAEHPEGSVLTVGSPGAVSDTGAMAEHHP
KTAIFMKRRSSAGPDGKAELGTVPIKASLDDMKRQLRLGPANRAARPRNTRNDVFKIKQGLGVTTAAAAAGTASN
GKLVSKAATVDEGEESPLLPTVNGGRPGSTRYGSAQGGGEE*
Coding >Ophcf2|01429
ATGAGAAGACATGGTACCTCTGCAGCCTTTACCAATTTGAGGCCGGTCGTCCTCGGCCTTGGACGGCTGATGGGC
GTCGCGGCCGCGCCTCTGGTCCTTCCCGACGACAATCATGTCCGCGACACTCCCATCTGGGTCCTGGCCCTCGCA
TCCATGACTCTCGTCCTTCTGGGCGGCGCATTCGCTGGCTTAACCATCGCCTTCATGGGCCAGGACAGCATCTAT
CTCCAGGTCCTTTCGGGCGACCCCGCAGAGCCGCAGCATAGGAATGCCAAGAGCGTCCTCAGTCTACTCAAAAGG
GGCAAGCACTGGGTCCTCGTCACCCTGCTTCTGGCCAACGTCATCGTCAACGAGTCGCTCCCCGTCGTCCTCGAC
CGCACCCTCGGAGGCGGCGTCGCTGCTGTCGTCGGCAGCACCGTCCTTATCGTCATCTTTGGCGAAATCGTTCCC
CAGTCCATATGCGTTCGCTTCGGCCTGCCCATCGGCGGCTACATGTCGAAGCCCGTCCTCCTGCTCATGTATCTG
CTAAGTCCCGTCGCCTGGCCCACCGCCAAGCTTCTCGACTGGATCCTGGGTGAGGATCACGGCACCGTGTACAAG
AAGAGCGGACTCAAGACGCTCGTCACGCTGCACAAGTCTCTTGGCGATCTATCGGAGCGACTGAACCAGGACGAG
GTCACCATCATCACCGCCGTTCTCGACTTGAAGGACAAGCCCGTGTCCGAGGTCATGACACCCATGGATGACGTC
TTCACCCTTGCCGAAGATCACGTCCTGGACGAAAAGACTATGGATAACATCCTATCGTCGGGCTACTCGAGGATT
CCCATCTACCGCGCGGGCAACCCAACCGACTTCGTCGGCATGCTACTGGTCAAGACGCTCATCACGTACGACCCA
GAGGACCGCATTCCAGTCAGAGACGTACAGCTGGGCGCCATCGTCGAAACGCGGCCAGAGACCAGCTGCCTCGAC
ATCATCAACTTTTTCCAGGAGGGAAAATCTCACATGGTGCTGGTGTCCGAATACCCAGGGTCCGACCACGGCGCG
CTGGGCGTCGTCACTCTTGAAGACGTCATTGAGGAGCTCATCGGAGAGGAAATCGTGGACGAATCGGACGTGTAC
GTGGATGTGCACAAGGCGATTCGACGCCTGACGCCGGCGCCGCGGGCCAGGCGGCATCATCACGAAGACGCGTCG
TCGGCGACCTCGGTCACGGCCGTAGCGGTTAAGAAGCCCGCTGACGGATCGCTTCTGGTGGATATTGCCGAGCAC
CCCGAGGGATCGGTCCTCACGGTCGGCTCGCCAGGAGCGGTCAGCGATACGGGCGCCATGGCGGAACACCACCCG
AAGACGGCCATCTTTATGAAGCGGCGCAGCTCTGCGGGACCCGACGGGAAAGCCGAGCTCGGGACGGTGCCGATC
AAGGCGTCGCTGGACGACATGAAGCGACAACTACGACTAGGGCCGGCTAACCGCGCGGCGCGGCCCCGTAACACA
CGGAACGATGTTTTCAAAATCAAACAGGGACTCGGAGTTACGACGGCGGCGGCGGCGGCTGGCACGGCGAGTAAC
GGAAAACTGGTGTCCAAGGCGGCGACTGTCGACGAGGGCGAGGAGTCGCCGCTGCTGCCGACGGTCAATGGCGGA
CGGCCTGGTTCGACGCGCTACGGATCAGCCCAGGGCGGAGGAGAGGAGTGA
Transcript >Ophcf2|01429
ATGAGAAGACATGGTACCTCTGCAGCCTTTACCAATTTGAGGCCGGTCGTCCTCGGCCTTGGACGGCTGATGGGC
GTCGCGGCCGCGCCTCTGGTCCTTCCCGACGACAATCATGTCCGCGACACTCCCATCTGGGTCCTGGCCCTCGCA
TCCATGACTCTCGTCCTTCTGGGCGGCGCATTCGCTGGCTTAACCATCGCCTTCATGGGCCAGGACAGCATCTAT
CTCCAGGTCCTTTCGGGCGACCCCGCAGAGCCGCAGCATAGGAATGCCAAGAGCGTCCTCAGTCTACTCAAAAGG
GGCAAGCACTGGGTCCTCGTCACCCTGCTTCTGGCCAACGTCATCGTCAACGAGTCGCTCCCCGTCGTCCTCGAC
CGCACCCTCGGAGGCGGCGTCGCTGCTGTCGTCGGCAGCACCGTCCTTATCGTCATCTTTGGCGAAATCGTTCCC
CAGTCCATATGCGTTCGCTTCGGCCTGCCCATCGGCGGCTACATGTCGAAGCCCGTCCTCCTGCTCATGTATCTG
CTAAGTCCCGTCGCCTGGCCCACCGCCAAGCTTCTCGACTGGATCCTGGGTGAGGATCACGGCACCGTGTACAAG
AAGAGCGGACTCAAGACGCTCGTCACGCTGCACAAGTCTCTTGGCGATCTATCGGAGCGACTGAACCAGGACGAG
GTCACCATCATCACCGCCGTTCTCGACTTGAAGGACAAGCCCGTGTCCGAGGTCATGACACCCATGGATGACGTC
TTCACCCTTGCCGAAGATCACGTCCTGGACGAAAAGACTATGGATAACATCCTATCGTCGGGCTACTCGAGGATT
CCCATCTACCGCGCGGGCAACCCAACCGACTTCGTCGGCATGCTACTGGTCAAGACGCTCATCACGTACGACCCA
GAGGACCGCATTCCAGTCAGAGACGTACAGCTGGGCGCCATCGTCGAAACGCGGCCAGAGACCAGCTGCCTCGAC
ATCATCAACTTTTTCCAGGAGGGAAAATCTCACATGGTGCTGGTGTCCGAATACCCAGGGTCCGACCACGGCGCG
CTGGGCGTCGTCACTCTTGAAGACGTCATTGAGGAGCTCATCGGAGAGGAAATCGTGGACGAATCGGACGTGTAC
GTGGATGTGCACAAGGCGATTCGACGCCTGACGCCGGCGCCGCGGGCCAGGCGGCATCATCACGAAGACGCGTCG
TCGGCGACCTCGGTCACGGCCGTAGCGGTTAAGAAGCCCGCTGACGGATCGCTTCTGGTGGATATTGCCGAGCAC
CCCGAGGGATCGGTCCTCACGGTCGGCTCGCCAGGAGCGGTCAGCGATACGGGCGCCATGGCGGAACACCACCCG
AAGACGGCCATCTTTATGAAGCGGCGCAGCTCTGCGGGACCCGACGGGAAAGCCGAGCTCGGGACGGTGCCGATC
AAGGCGTCGCTGGACGACATGAAGCGACAACTACGACTAGGGCCGGCTAACCGCGCGGCGCGGCCCCGTAACACA
CGGAACGATGTTTTCAAAATCAAACAGGGACTCGGAGTTACGACGGCGGCGGCGGCGGCTGGCACGGCGAGTAAC
GGAAAACTGGTGTCCAAGGCGGCGACTGTCGACGAGGGCGAGGAGTCGCCGCTGCTGCCGACGGTCAATGGCGGA
CGGCCTGGTTCGACGCGCTACGGATCAGCCCAGGGCGGAGGAGAGGAGTGA
Gene >Ophcf2|01429
ATGAGAAGACATGGTACCTCTGCAGCCTTTACCAATTTGAGGCCGGTCGTCCTCGGCCTTGGACGGCTGATGGGC
GTCGCGGCCGCGCCTCTGGTCCTTCCCGACGACAATCATGTCCGCGACACTCCCATCTGGGTCCTGGCCCTCGCA
TCCATGACTCTCGTCCTTCTGGGCGGCGCATTCGCTGGCTTAACCATCGCGTTAGCTCCATGACGCTCCCCAACT
GTGAACCGCGACGAGGCTGACGCGCAGCAGCTTCATGGGCCAGGACAGCATCTATCTCCAGGTCCTTTCGGGCGA
CCCCGCAGAGCCGCAGCATAGGAATGCCAAGAGCGTCCTCAGTCTACTCAAAAGGGGCAAGCACTGGGTCCTCGT
CACCCTGCTTCTGGCCAACGTCATCGTCAACGAGTCGCTCCCCGTCGTCCTCGACCGCACCCTCGGAGGCGGCGT
CGCTGCTGTCGTCGGCAGCACCGTCCTTATCGGTACGTAAATCTCTTCCCAACTTACCCAGGTATGCTCCTGGTG
CTGACCATCCAAACTGCAGTCATCTTTGGCGAAATCGTTCCCCAGTCCATATGCGTTCGCTTCGGCCTGCCCATC
GGCGGCTACATGTCGAAGCCCGTCCTCCTGCTCATGTATCTGCTAAGTCCCGTCGCCTGGCCCACCGCCAAGCTT
CTCGACTGGATCCTGGGTGAGGATCACGGCACCGTGTACAAGAAGAGCGGACTCAAGACGCTCGTCACGCTGCAC
AAGTCTCTTGGCGATCTATCGGAGCGACTGAACCAGGACGAGGTCACCATCATCACCGCCGTTCTCGACTTGAAG
GACAAGCCCGTGTCCGAGGTCATGACACCCATGGATGACGTCTTCACCCTTGCCGAAGATCACGTCCTGGACGAA
AAGACTATGGATAACATCCTATCGTCGGGCTACTCGAGGATTCCCATCTACCGCGCGGGCAACCCAACCGACTTC
GTCGGCATGCTACTGGTCAAGACGCTCATCACGTACGACCCAGAGGACCGCATTCCAGTCAGAGACGTACAGCTG
GGCGCCATCGTCGAAACGCGGCCAGAGACCAGCTGCCTCGACATCATCAACTTTTTCCAGGAGGGAAAATCTCAC
ATGGTGCTGGTGTCCGAATACCCAGGGTCCGACCACGGCGCGCTGGGCGTCGTCACTCTTGAAGACGTCATTGAG
GAGCTCATCGGAGAGTAAGTGTGACTGGAGAAGAGGAACGACCGGACGAGTCGTACTGATGTCATAGCAGGGAAA
TCGTGGACGAATCGGACGTGTACGTGGATGTGCACAAGGCGATTCGACGCCTGACGCCGGCGCCGCGGGCCAGGC
GGCATCATCACGAAGACGCGTCGTCGGCGACCTCGGTCACGGCCGTAGCGGTTAAGAAGCCCGCTGACGGATCGC
TTCTGGTGGATATTGCCGAGCACCCCGAGGGATCGGTCCTCACGGTCGGCTCGCCAGGAGCGGTCAGCGATACGG
GCGCCATGGCGGAACACCACCCGAAGACGGCCATCTTTATGAAGCGGCGCAGCTCTGCGGGACCCGACGGGAAAG
CCGAGCTCGGGACGGTGCCGATCAAGGCGTCGCTGGACGACATGAAGCGACAACTACGACTAGGGCCGGCTAACC
GCGCGGCGCGGCCCCGTAACACACGGAACGATGTTTTCAAAATCAAACAGGGACTCGGAGTTACGACGGCGGCGG
CGGCGGCTGGCACGGCGAGTAACGGAAAACTGGTGTCCAAGGCGGCGACTGTCGACGAGGGCGAGGAGTCGCCGC
TGCTGCCGACGGTCAATGGCGGACGGCCTGGTTCGACGCGCTACGGATCAGCCCAGGGCGGAGGAGAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail