Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|01422
Gene name
Location	scaffold_01:4964783..4966079
Strand	-
Gene length (bp)	1296
Transcript length (bp)	1296
Coding sequence length (bp)	1296
Protein length (aa)	432

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00026	Asp	Eukaryotic aspartyl protease	2.6E-12	41	428

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	13.94	6.01	21.87
Alive	In ants, during behavior modification	86.16	38.84	133.49
Dead	In ants, recently dead	10.90	4.23	17.57

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.000238	yes
Alive	Dead	0.000238	yes
Dead	Fungus	0.357742	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|01422 MYVLGRSLSCSLAIAGALASTAVPACSGCVSLPAVWDTFGYLFNVTVGGQELRVLSDWTWMSLFVRSGRCMNRLD EATCVGTAGQTFFDERQSTSFRNSSLAQTRWPLTAFAENFTVDYGVDSVCVGQVCSHDTVFQLSDFPFPAEAIPV MPFAGIYGLAPVTAGLTEASHPAHYQAWRSGKLASRVGWHSCHALNSADSCLGGDAKFVFGGSDASIYDEARLRT FAVRNPGWLGDAFYPVRPPRNNYWAAALTGCWIRIRGSGRESTNFAMKNSNGHDDGREGNVTMALLDEGSEGLGA PLSSRAYGWLAEQINARPASESIVSAIASQGSSGFNTGLQPWYTVPCGETDRLPDLVYELEGRENYTIRPEDYVT RLRESQLCYLNVNVWKYGRTEGGDARVVLLGRAFLRRLYVVLDFESLSFGLAPLRV*
Coding	>Ophcf2\|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG
Transcript	>Ophcf2\|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG
Gene	>Ophcf2\|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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