Protein ID | Ophcf2|01422 |
Gene name | |
Location | scaffold_01:4964783..4966079 |
Strand | - |
Gene length (bp) | 1296 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1296 |
Protein length (aa) | 432 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00026 | Asp | Eukaryotic aspartyl protease | 2.6E-12 | 41 | 428 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01422 MYVLGRSLSCSLAIAGALASTAVPACSGCVSLPAVWDTFGYLFNVTVGGQELRVLSDWTWMSLFVRSGRCMNRLD EATCVGTAGQTFFDERQSTSFRNSSLAQTRWPLTAFAENFTVDYGVDSVCVGQVCSHDTVFQLSDFPFPAEAIPV MPFAGIYGLAPVTAGLTEASHPAHYQAWRSGKLASRVGWHSCHALNSADSCLGGDAKFVFGGSDASIYDEARLRT FAVRNPGWLGDAFYPVRPPRNNYWAAALTGCWIRIRGSGRESTNFAMKNSNGHDDGREGNVTMALLDEGSEGLGA PLSSRAYGWLAEQINARPASESIVSAIASQGSSGFNTGLQPWYTVPCGETDRLPDLVYELEGRENYTIRPEDYVT RLRESQLCYLNVNVWKYGRTEGGDARVVLLGRAFLRRLYVVLDFESLSFGLAPLRV* |
Coding | >Ophcf2|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG |
Transcript | >Ophcf2|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG |
Gene | >Ophcf2|01422 ATGTACGTCCTCGGCCGCTCGCTATCCTGCTCCCTAGCCATAGCCGGTGCCTTGGCCTCGACCGCCGTGCCGGCA TGTAGCGGCTGCGTTTCCCTGCCCGCCGTCTGGGACACCTTCGGCTATCTCTTCAACGTGACCGTCGGCGGCCAG GAGCTGCGCGTCCTGAGCGACTGGACCTGGATGTCGCTCTTCGTCCGGTCCGGGCGATGCATGAACCGCTTAGAC GAGGCCACCTGCGTCGGCACCGCGGGCCAGACCTTCTTCGATGAACGGCAATCAACCAGCTTCCGCAACTCATCT CTCGCTCAGACCCGCTGGCCCTTGACGGCATTTGCGGAAAACTTCACCGTCGACTACGGCGTCGACTCTGTCTGC GTCGGCCAGGTCTGCAGCCACGATACCGTCTTTCAACTCTCCGACTTTCCTTTCCCCGCCGAGGCTATTCCCGTC ATGCCCTTCGCTGGTATCTACGGGTTGGCTCCCGTAACCGCTGGCTTGACCGAGGCTTCACATCCTGCTCACTAT CAGGCCTGGCGATCGGGGAAGCTGGCCTCGCGCGTGGGATGGCATTCCTGTCATGCGCTGAACTCGGCTGATTCT TGTCTCGGTGGAGACGCCAAGTTTGTCTTTGGTGGTTCTGATGCTTCGATCTATGATGAGGCTCGCTTGCGGACT TTTGCTGTTCGGAATCCGGGTTGGCTTGGTGATGCTTTTTATCCTGTTCGTCCGCCGAGGAATAACTACTGGGCT GCGGCTCTGACTGGCTGCTGGATTCGGATCAGGGGAAGCGGTAGGGAGTCAACCAATTTTGCCATGAAGAACAGT AACGGTCATGATGACGGCCGAGAGGGAAACGTCACAATGGCCTTGCTGGATGAGGGATCCGAGGGTCTCGGCGCA CCGCTTTCGTCTAGGGCATACGGCTGGCTAGCAGAGCAGATCAATGCCCGACCAGCCTCCGAGAGCATCGTCAGC GCCATCGCCAGCCAGGGATCATCGGGCTTCAACACCGGTCTTCAGCCGTGGTACACGGTCCCTTGCGGCGAGACG GACCGGTTGCCGGACCTGGTGTACGAGCTGGAGGGGCGAGAGAATTATACGATTCGGCCTGAGGACTATGTCACG AGGTTGCGGGAGAGCCAGTTGTGCTATCTTAACGTTAATGTCTGGAAGTATGGGCGGACAGAGGGTGGTGATGCG AGGGTGGTGTTGTTGGGGAGGGCTTTTCTGAGGCGGCTTTATGTTGTACTTGACTTTGAGAGTCTTTCTTTTGGG CTTGCTCCTCTGAGGGTTTAG |