© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophcf2|01421 |
| Gene name | |
| Location | scaffold_01:4963849..4964523 |
| Strand | + |
| Gene length (bp) | 674 |
| Transcript length (bp) | 483 |
| Coding sequence length (bp) | 483 |
| Protein length (aa) | 161 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02798 | GST_N | Glutathione S-transferase, N-terminal domain | 3.1E-15 | 3 | 76 |
| PF13417 | GST_N_3 | Glutathione S-transferase, N-terminal domain | 6.6E-07 | 18 | 76 |
| PF13409 | GST_N_2 | Glutathione S-transferase, N-terminal domain | 1.5E-05 | 16 | 75 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006749 | glutathione metabolic process | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006518 | peptide metabolic process | No |
| GO:0006790 | sulfur compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0006575 | cellular modified amino acid metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0043603 | cellular amide metabolic process | No |
| GO:0005488 | binding | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophcf2|01421 MFGKIYSFMPNGRVFKILAAAKLNGLELEIADYQHTITNQTPDFLAKFPVGKVPVFEGSDGLCLSESDAIAQYMA QSGPRASQLLGHNASSSAQIRQWISFTDSELTSHVIDLVLWRVGLGVFNAEVETRALAGVEKGLAVLERRLRGRT WLVGEEDCWC* |
| Coding | >Ophcf2|01421 ATGTTTGGCAAGATTTATTCTTTCATGCCAAATGGAAGGGTCTTTAAAATCCTCGCCGCGGCCAAGCTCAACGGC CTCGAATTAGAGATAGCCGACTACCAACACACAATCACCAACCAAACGCCCGACTTTCTCGCCAAGTTCCCCGTC GGCAAGGTCCCCGTCTTCGAAGGCTCCGACGGTCTCTGCCTCTCGGAATCAGACGCAATCGCCCAGTACATGGCC CAATCCGGCCCACGAGCATCCCAACTCCTAGGCCACAACGCATCTAGCAGCGCGCAAATCCGGCAATGGATCTCC TTCACGGACAGCGAGCTAACGTCGCACGTCATCGACCTTGTGCTGTGGCGCGTCGGGCTGGGCGTCTTCAACGCA GAGGTCGAGACGCGGGCTCTGGCTGGGGTGGAGAAGGGGCTGGCTGTGTTGGAGAGGCGTTTGCGTGGACGGACT TGGTTGGTGGGTGAGGAGGACTGTTGGTGTTGA |
| Transcript | >Ophcf2|01421 ATGTTTGGCAAGATTTATTCTTTCATGCCAAATGGAAGGGTCTTTAAAATCCTCGCCGCGGCCAAGCTCAACGGC CTCGAATTAGAGATAGCCGACTACCAACACACAATCACCAACCAAACGCCCGACTTTCTCGCCAAGTTCCCCGTC GGCAAGGTCCCCGTCTTCGAAGGCTCCGACGGTCTCTGCCTCTCGGAATCAGACGCAATCGCCCAGTACATGGCC CAATCCGGCCCACGAGCATCCCAACTCCTAGGCCACAACGCATCTAGCAGCGCGCAAATCCGGCAATGGATCTCC TTCACGGACAGCGAGCTAACGTCGCACGTCATCGACCTTGTGCTGTGGCGCGTCGGGCTGGGCGTCTTCAACGCA GAGGTCGAGACGCGGGCTCTGGCTGGGGTGGAGAAGGGGCTGGCTGTGTTGGAGAGGCGTTTGCGTGGACGGACT TGGTTGGTGGGTGAGGAGGACTGTTGGTGTTGA |
| Gene | >Ophcf2|01421 ATGTTTGGCAAGATTTATTCTTTCATGCCAAATGGAAGGGTCTTTAAAGTAAGTAAAGCCCGCTTCAATATGAGA ATCCGTTAATATTGCTTTGATGCTGAAGACAATCTAACCAACACCCATTCCTAGATCCTCGCCGCGGCCAAGCTC AACGGCCTCGAATTAGAGATAGCCGACTACCAACACACAATCACCAACCAAACGCCCGACTTTCTCGCCAAGTTC CCCGTCGGCAAGGTCCCCGTCTTCGAAGGCTCCGACGGTCTCTGCCTCTCGGAATCAGACGCAATCGCCCAGTAC ATGGCCCAATCCGGCCCACGAGCATCCCAACTCCTAGGCCACAACGCATCTAGCAGCGCGCAAATCCGGCAATGG ATCTCCTTCACGGACAGCGAGCTAACGTCGCACGTCATCGACCTTGTGCTGTGGCGCGTCGGGCTGGGCGTCTTC AACGCAGAGGTCGAGACGCGGGCTCTGGCTGGGGTGGAGAAGGGGCTGGCTGTGTTGGAGAGGCGTTTGCGTGGA CGGACTTGGTTGGTGGGTGAGGAGGTGAGTCTTGCTGATCTTACGGTTGCTTCTGCGCTGGTTTGGGCTTTTCGA CATGTTGTTGATGGGAGGATGAGGGGGGGGGTTCCGGGTGTTTGTGCTTGGTATCTTAGGACTGTTGGTGTTGA |