Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01329
Gene name
Locationscaffold_01:4709516..4710620
Strand+
Gene length (bp)1104
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01569 PAP2 PAP2 superfamily 1.4E-26 105 253

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 68 0.5

Transmembrane Domains

Domain # Start End Length
1 33 54 21
2 74 96 22
3 103 122 19
4 176 195 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01329
MPSSTYPRTSIPGDSRHMSQLARVWKTTYMSDYAGLALLGIGLGLLATFVTPFHRMFSVNDLAISFPHAEHERVP
TSWAIIAALIFPLLVFVCHGCRFGHSQALYLSFTVAIMLTGFLTEVVKDAVGRPRPDLLARCRLKKDAKLDGLVT
IEVCDLPHDRKLHEGWRSFPSGHSSFSFAGLGFLSLFFAGQLHLFSQAGNRDLCRTLLCLSPLIGAMLIAISRCE
DYRHDVYDVCCGSALGMFIAYWSYRRHWPKLSSPKCDVPLPPPGSDTREWQRIGDEEMGDPGSERGYELGDLART
RSRQPR*
Coding >Ophcf2|01329
ATGCCATCCAGCACGTACCCAAGGACGTCGATCCCGGGAGATAGCCGCCACATGTCGCAACTGGCTCGAGTCTGG
AAGACGACTTACATGTCCGACTACGCCGGCTTGGCGCTTCTGGGGATTGGACTTGGTCTCTTAGCTACTTTCGTT
ACGCCGTTCCATCGCATGTTCTCCGTCAACGATCTTGCCATCTCCTTTCCTCACGCCGAGCACGAGCGCGTCCCC
ACCTCCTGGGCCATCATTGCCGCCCTAATATTCCCGCTACTCGTCTTCGTCTGCCACGGCTGCCGATTCGGGCAC
TCACAAGCCCTATACCTGTCCTTCACAGTCGCCATCATGCTCACGGGCTTCCTCACCGAGGTCGTCAAGGATGCG
GTTGGCCGGCCTCGCCCCGACCTACTGGCTCGCTGCAGGCTGAAGAAGGACGCCAAGCTGGATGGTCTCGTCACC
ATCGAAGTATGCGACCTACCGCACGATCGCAAGCTGCACGAAGGCTGGCGTTCCTTTCCCTCCGGACACTCTTCC
TTCTCCTTCGCCGGTCTCGGCTTCTTGAGTCTCTTCTTCGCCGGTCAGCTGCACCTGTTTAGCCAGGCTGGGAAT
CGGGACCTCTGCCGTACACTGCTTTGCCTGAGCCCACTTATTGGCGCCATGCTCATTGCCATCTCGCGATGCGAA
GACTATCGTCACGACGTCTATGACGTCTGCTGCGGCTCCGCGCTGGGCATGTTCATCGCCTACTGGAGCTATCGA
AGGCATTGGCCCAAGCTCTCTAGTCCCAAGTGTGACGTCCCCTTGCCACCACCCGGTTCTGATACGAGAGAGTGG
CAACGGATCGGGGATGAGGAAATGGGTGACCCTGGCTCGGAGCGTGGCTACGAGTTGGGGGATCTGGCCAGAACG
CGCTCCAGACAGCCCAGGTAA
Transcript >Ophcf2|01329
ATGCCATCCAGCACGTACCCAAGGACGTCGATCCCGGGAGATAGCCGCCACATGTCGCAACTGGCTCGAGTCTGG
AAGACGACTTACATGTCCGACTACGCCGGCTTGGCGCTTCTGGGGATTGGACTTGGTCTCTTAGCTACTTTCGTT
ACGCCGTTCCATCGCATGTTCTCCGTCAACGATCTTGCCATCTCCTTTCCTCACGCCGAGCACGAGCGCGTCCCC
ACCTCCTGGGCCATCATTGCCGCCCTAATATTCCCGCTACTCGTCTTCGTCTGCCACGGCTGCCGATTCGGGCAC
TCACAAGCCCTATACCTGTCCTTCACAGTCGCCATCATGCTCACGGGCTTCCTCACCGAGGTCGTCAAGGATGCG
GTTGGCCGGCCTCGCCCCGACCTACTGGCTCGCTGCAGGCTGAAGAAGGACGCCAAGCTGGATGGTCTCGTCACC
ATCGAAGTATGCGACCTACCGCACGATCGCAAGCTGCACGAAGGCTGGCGTTCCTTTCCCTCCGGACACTCTTCC
TTCTCCTTCGCCGGTCTCGGCTTCTTGAGTCTCTTCTTCGCCGGTCAGCTGCACCTGTTTAGCCAGGCTGGGAAT
CGGGACCTCTGCCGTACACTGCTTTGCCTGAGCCCACTTATTGGCGCCATGCTCATTGCCATCTCGCGATGCGAA
GACTATCGTCACGACGTCTATGACGTCTGCTGCGGCTCCGCGCTGGGCATGTTCATCGCCTACTGGAGCTATCGA
AGGCATTGGCCCAAGCTCTCTAGTCCCAAGTGTGACGTCCCCTTGCCACCACCCGGTTCTGATACGAGAGAGTGG
CAACGGATCGGGGATGAGGAAATGGGTGACCCTGGCTCGGAGCGTGGCTACGAGTTGGGGGATCTGGCCAGAACG
CGCTCCAGACAGCCCAGGTAA
Gene >Ophcf2|01329
ATGCCATCCAGCACGTACCCAAGGACGTCGATCCCGGGAGATAGCCGCCACATGTCGCAACTGGCTCGAGTCTGG
AAGGTCAGGCCAGCGCGTCCCTCATGAATGCTGCCGCTGACGCCTTGAATAGACGACTTACATGTCCGACTACGC
CGGCTTGGCGCTTCTGGGGATTGGACTTGGTCTCGTGAGTTCTCGTTTAGCGCTCTTCTGCTATACTTTACAGTC
TGACCGTGCCCGTCTTCAAGTTAGCTACTTTCGTTACGCCGTTCCATCGCATGTTCTCCGTCAACGATCTTGCCA
TCTCCTTTCCTCACGCCGAGCACGAGCGCGTCCCCACCTGTGAGTTCTTCAAGCTCGACTCATGCGCAGAAAGCA
CGGCTAAGATGTATGTATGTTTCTTTGTACACGACAGCCTGGGCCATCATTGCCGCCCTAATATTCCCGCTACTC
GTCTTCGTCTGCCACGGCTGCCGATTCGGGCACTCACAAGCCCTATACCTGTCCTTCACAGTCGCCATCATGCTC
ACGGGCTTCCTCACCGAGGTCGTCAAGGATGCGGTTGGCCGGCCTCGCCCCGACCTACTGGCTCGCTGCAGGCTG
AAGAAGGACGCCAAGCTGGATGGTCTCGTCACCATCGAAGTATGCGACCTACCGCACGATCGCAAGCTGCACGAA
GGCTGGCGTTCCTTTCCCTCCGGACACTCTTCCTTCTCCTTCGCCGGTCTCGGCTTCTTGAGTCTCTTCTTCGCC
GGTCAGCTGCACCTGTTTAGCCAGGCTGGGAATCGGGACCTCTGCCGTACACTGCTTTGCCTGAGCCCACTTATT
GGCGCCATGCTCATTGCCATCTCGCGATGCGAAGACTATCGTCACGACGTCTATGACGTCTGCTGCGGCTCCGCG
CTGGGCATGTTCATCGCCTACTGGAGCTATCGAAGGCATTGGCCCAAGCTCTCTAGTCCCAAGTGTGACGTCCCC
TTGCCACCACCCGGTTCTGATACGAGAGAGTGGCAACGGATCGGGGATGAGGAAATGGGTGACCCTGGCTCGGAG
CGTGGCTACGAGTTGGGGGATCTGGCCAGAACGCGCTCCAGACAGCCCAGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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