Protein ID | Ophcf2|01324 |
Gene name | |
Location | scaffold_01:4684701..4686703 |
Strand | + |
Gene length (bp) | 2002 |
Transcript length (bp) | 1917 |
Coding sequence length (bp) | 1917 |
Protein length (aa) | 639 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07350 | DUF1479 | Protein of unknown function (DUF1479) | 3.6E-126 | 19 | 616 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01324 MLLRKPSKGSATAVILLVRWRRLLTALRNEVDHIEGLGPHLIPSIEFSDVDDAAQTRRFGRDVRRYGVGIVRKVL PRSSAQQAVSDTVGYLEARAGSSTTRPARFRGPRQDPWCFDCFWTPAQVRCRAHPNVLKAQRYVMGLWETDGDER LTTRLPVSYVDRVRVRGGGFDDVVVEGIVGEVGSEESEESEASSSASFAREERKKMGVGGSGSSNLMNKGSISIS SSSNYDHDHDHDHDHDHNHNHNHNHINNHINNHNNNHNNHNNNHHNNHNNHNNHHNNHHNNTTITTTTTTTTTII NTTPDDDPPFFRNPHKHHHHHQQQQQQQQQQQQQLLAADDWISALQSSAGVIAQVDNGSLERWEPDGYGRCGTYN RIFAGDWENYDPWQSSGRVGATTDLYNGYGSCSIFRMFQGLLSLSTAEPGMLRLLPSPRLATAYYLLRPFFSSRR PPPGPDVARPGPEWDAYLDPDNWLLQPEPDTIIHGAVPGHAQRLTEPWHPHLHLRSSLVTLPTLQPGDYILWHPD LAYHFSDPASVAGPAGPDRPVTMLLYVPAAPLTQTNALYLARQRKAFRRGHPGPDFDTLGRGIVAEDPDLRPGED EIARVGGVDALRAMGLAPWEPEPASAVVDLANLILFPE* |
Coding | >Ophcf2|01324 ATGCTCCTCCGAAAGCCAAGCAAAGGAAGCGCCACCGCCGTCATCCTTCTGGTCCGCTGGCGACGACTTCTGACG GCGCTGAGGAATGAAGTCGATCATATTGAAGGGTTGGGACCGCATTTAATCCCCTCGATAGAATTCAGTGACGTC GATGACGCAGCGCAAACCCGTCGTTTCGGCCGAGATGTCCGAAGATACGGCGTCGGCATCGTCCGGAAAGTCCTC CCCCGTTCCTCCGCCCAGCAAGCCGTCTCGGATACCGTCGGCTACCTGGAAGCCCGGGCGGGATCATCGACGACT CGGCCCGCGCGCTTCCGGGGTCCGCGACAGGACCCTTGGTGTTTCGACTGCTTCTGGACGCCGGCGCAGGTTCGC TGCAGGGCGCATCCGAATGTGTTGAAGGCGCAGCGATATGTCATGGGGCTTTGGGAGACGGACGGTGATGAGCGG CTGACGACGAGGTTGCCGGTTTCGTACGTTGATCGGGTTAGGGTTAGGGGGGGAGGGTTTGACGATGTTGTGGTT GAGGGTATCGTAGGGGAGGTCGGGTCGGAGGAGTCGGAGGAGTCGGAGGCGTCGTCTTCGGCGTCGTTTGCGAGG GAGGAGAGGAAGAAGATGGGTGTGGGCGGGAGCGGGAGCAGCAATCTGATGAACAAGGGCAGTATCAGTATCAGC AGCAGCAGCAACTACGACCACGACCACGACCACGACCACGACCACGACCACAACCACAACCACAACCACAACCAC ATCAACAACCACATCAACAACCACAACAACAACCACAACAACCACAACAACAACCACCACAACAACCACAACAAC CACAACAACCACCACAACAACCACCACAACAACACCACTATTACCACCACCACCACCACCACCACCACCATCATC AACACAACCCCCGACGACGACCCTCCCTTCTTCCGCAACCCCCACAAACATCATCATCACCATCAACAACAACAA CAACAACAACAACAACAACAACAACAACTCCTCGCCGCAGACGACTGGATCTCCGCCCTCCAATCCTCGGCCGGC GTCATCGCCCAAGTCGACAACGGCTCCCTCGAACGCTGGGAACCCGACGGCTACGGCCGCTGCGGAACCTACAAC CGCATCTTCGCCGGCGACTGGGAAAACTACGACCCCTGGCAGAGCAGCGGCCGCGTCGGCGCAACCACGGACCTC TACAACGGCTACGGCTCCTGCTCCATCTTCCGCATGTTCCAGGGCCTCCTCTCGCTGTCCACGGCAGAGCCCGGC ATGCTCCGTCTCCTACCCTCCCCCCGACTCGCGACCGCTTACTACCTCCTCCGTCCCTTCTTCAGCTCCCGCCGT CCGCCTCCCGGTCCGGACGTGGCCCGGCCCGGCCCGGAGTGGGACGCCTACCTCGATCCGGATAACTGGCTCCTG CAGCCGGAACCCGATACCATCATCCACGGCGCCGTCCCCGGCCACGCTCAGCGCCTGACGGAACCATGGCATCCG CACCTTCACCTCCGGAGCAGCCTCGTCACCCTCCCCACCCTCCAGCCCGGCGACTACATCCTCTGGCACCCGGAT CTAGCCTACCACTTCTCCGACCCGGCGAGCGTCGCCGGCCCCGCAGGCCCGGACCGGCCCGTCACCATGCTCCTG TACGTCCCGGCCGCGCCGCTGACGCAGACCAACGCGCTGTATCTGGCACGTCAGCGCAAGGCCTTCCGGCGCGGC CACCCGGGTCCGGACTTTGACACGCTCGGCCGGGGCATCGTCGCGGAGGATCCGGACTTGCGTCCTGGAGAGGAT GAGATTGCTCGTGTTGGGGGGGTTGATGCCCTGCGTGCCATGGGGCTTGCTCCTTGGGAGCCCGAGCCGGCTTCG GCTGTCGTCGATCTGGCCAACCTGATTCTCTTTCCCGAGTGA |
Transcript | >Ophcf2|01324 ATGCTCCTCCGAAAGCCAAGCAAAGGAAGCGCCACCGCCGTCATCCTTCTGGTCCGCTGGCGACGACTTCTGACG GCGCTGAGGAATGAAGTCGATCATATTGAAGGGTTGGGACCGCATTTAATCCCCTCGATAGAATTCAGTGACGTC GATGACGCAGCGCAAACCCGTCGTTTCGGCCGAGATGTCCGAAGATACGGCGTCGGCATCGTCCGGAAAGTCCTC CCCCGTTCCTCCGCCCAGCAAGCCGTCTCGGATACCGTCGGCTACCTGGAAGCCCGGGCGGGATCATCGACGACT CGGCCCGCGCGCTTCCGGGGTCCGCGACAGGACCCTTGGTGTTTCGACTGCTTCTGGACGCCGGCGCAGGTTCGC TGCAGGGCGCATCCGAATGTGTTGAAGGCGCAGCGATATGTCATGGGGCTTTGGGAGACGGACGGTGATGAGCGG CTGACGACGAGGTTGCCGGTTTCGTACGTTGATCGGGTTAGGGTTAGGGGGGGAGGGTTTGACGATGTTGTGGTT GAGGGTATCGTAGGGGAGGTCGGGTCGGAGGAGTCGGAGGAGTCGGAGGCGTCGTCTTCGGCGTCGTTTGCGAGG GAGGAGAGGAAGAAGATGGGTGTGGGCGGGAGCGGGAGCAGCAATCTGATGAACAAGGGCAGTATCAGTATCAGC AGCAGCAGCAACTACGACCACGACCACGACCACGACCACGACCACGACCACAACCACAACCACAACCACAACCAC ATCAACAACCACATCAACAACCACAACAACAACCACAACAACCACAACAACAACCACCACAACAACCACAACAAC CACAACAACCACCACAACAACCACCACAACAACACCACTATTACCACCACCACCACCACCACCACCACCATCATC AACACAACCCCCGACGACGACCCTCCCTTCTTCCGCAACCCCCACAAACATCATCATCACCATCAACAACAACAA CAACAACAACAACAACAACAACAACAACTCCTCGCCGCAGACGACTGGATCTCCGCCCTCCAATCCTCGGCCGGC GTCATCGCCCAAGTCGACAACGGCTCCCTCGAACGCTGGGAACCCGACGGCTACGGCCGCTGCGGAACCTACAAC CGCATCTTCGCCGGCGACTGGGAAAACTACGACCCCTGGCAGAGCAGCGGCCGCGTCGGCGCAACCACGGACCTC TACAACGGCTACGGCTCCTGCTCCATCTTCCGCATGTTCCAGGGCCTCCTCTCGCTGTCCACGGCAGAGCCCGGC ATGCTCCGTCTCCTACCCTCCCCCCGACTCGCGACCGCTTACTACCTCCTCCGTCCCTTCTTCAGCTCCCGCCGT CCGCCTCCCGGTCCGGACGTGGCCCGGCCCGGCCCGGAGTGGGACGCCTACCTCGATCCGGATAACTGGCTCCTG CAGCCGGAACCCGATACCATCATCCACGGCGCCGTCCCCGGCCACGCTCAGCGCCTGACGGAACCATGGCATCCG CACCTTCACCTCCGGAGCAGCCTCGTCACCCTCCCCACCCTCCAGCCCGGCGACTACATCCTCTGGCACCCGGAT CTAGCCTACCACTTCTCCGACCCGGCGAGCGTCGCCGGCCCCGCAGGCCCGGACCGGCCCGTCACCATGCTCCTG TACGTCCCGGCCGCGCCGCTGACGCAGACCAACGCGCTGTATCTGGCACGTCAGCGCAAGGCCTTCCGGCGCGGC CACCCGGGTCCGGACTTTGACACGCTCGGCCGGGGCATCGTCGCGGAGGATCCGGACTTGCGTCCTGGAGAGGAT GAGATTGCTCGTGTTGGGGGGGTTGATGCCCTGCGTGCCATGGGGCTTGCTCCTTGGGAGCCCGAGCCGGCTTCG GCTGTCGTCGATCTGGCCAACCTGATTCTCTTTCCCGAGTGA |
Gene | >Ophcf2|01324 ATGCTCCTCCGAAAGCCAAGCAAAGGAAGCGCCACCGCCGTCATCCTTCTGGTCCGGTCCGGAACCGGTCCCTCT TCCTCCCCGATTCGCACGCATCAAGCGCAGTCTCGTAGCCGGACACGAGGCTGACGTACAAGCAAGCTGGCGACG ACTTCTGACGGCGCTGAGGAATGAAGTCGATCATATTGAAGGGTTGGGACCGCATTTAATCCCCTCGATAGAATT CAGTGACGTCGATGACGCAGCGCAAACCCGTCGTTTCGGCCGAGATGTCCGAAGATACGGCGTCGGCATCGTCCG GAAAGTCCTCCCCCGTTCCTCCGCCCAGCAAGCCGTCTCGGATACCGTCGGCTACCTGGAAGCCCGGGCGGGATC ATCGACGACTCGGCCCGCGCGCTTCCGGGGTCCGCGACAGGACCCTTGGTGTTTCGACTGCTTCTGGACGCCGGC GCAGGTTCGCTGCAGGGCGCATCCGAATGTGTTGAAGGCGCAGCGATATGTCATGGGGCTTTGGGAGACGGACGG TGATGAGCGGCTGACGACGAGGTTGCCGGTTTCGTACGTTGATCGGGTTAGGGTTAGGGGGGGAGGGTTTGACGA TGTTGTGGTTGAGGGTATCGTAGGGGAGGTCGGGTCGGAGGAGTCGGAGGAGTCGGAGGCGTCGTCTTCGGCGTC GTTTGCGAGGGAGGAGAGGAAGAAGATGGGTGTGGGCGGGAGCGGGAGCAGCAATCTGATGAACAAGGGCAGTAT CAGTATCAGCAGCAGCAGCAACTACGACCACGACCACGACCACGACCACGACCACGACCACAACCACAACCACAA CCACAACCACATCAACAACCACATCAACAACCACAACAACAACCACAACAACCACAACAACAACCACCACAACAA CCACAACAACCACAACAACCACCACAACAACCACCACAACAACACCACTATTACCACCACCACCACCACCACCAC CACCATCATCAACACAACCCCCGACGACGACCCTCCCTTCTTCCGCAACCCCCACAAACATCATCATCACCATCA ACAACAACAACAACAACAACAACAACAACAACAACAACTCCTCGCCGCAGACGACTGGATCTCCGCCCTCCAATC CTCGGCCGGCGTCATCGCCCAAGTCGACAACGGCTCCCTCGAACGCTGGGAACCCGACGGCTACGGCCGCTGCGG AACCTACAACCGCATCTTCGCCGGCGACTGGGAAAACTACGACCCCTGGCAGAGCAGCGGCCGCGTCGGCGCAAC CACGGACCTCTACAACGGCTACGGCTCCTGCTCCATCTTCCGCATGTTCCAGGGCCTCCTCTCGCTGTCCACGGC AGAGCCCGGCATGCTCCGTCTCCTACCCTCCCCCCGACTCGCGACCGCTTACTACCTCCTCCGTCCCTTCTTCAG CTCCCGCCGTCCGCCTCCCGGTCCGGACGTGGCCCGGCCCGGCCCGGAGTGGGACGCCTACCTCGATCCGGATAA CTGGCTCCTGCAGCCGGAACCCGATACCATCATCCACGGCGCCGTCCCCGGCCACGCTCAGCGCCTGACGGAACC ATGGCATCCGCACCTTCACCTCCGGAGCAGCCTCGTCACCCTCCCCACCCTCCAGCCCGGCGACTACATCCTCTG GCACCCGGATCTAGCCTACCACTTCTCCGACCCGGCGAGCGTCGCCGGCCCCGCAGGCCCGGACCGGCCCGTCAC CATGCTCCTGTACGTCCCGGCCGCGCCGCTGACGCAGACCAACGCGCTGTATCTGGCACGTCAGCGCAAGGCCTT CCGGCGCGGCCACCCGGGTCCGGACTTTGACACGCTCGGCCGGGGCATCGTCGCGGAGGATCCGGACTTGCGTCC TGGAGAGGATGAGATTGCTCGTGTTGGGGGGGTTGATGCCCTGCGTGCCATGGGGCTTGCTCCTTGGGAGCCCGA GCCGGCTTCGGCTGTCGTCGATCTGGCCAACCTGATTCTCTTTCCCGAGTGA |