Protein ID | Ophcf2|01322 |
Gene name | |
Location | scaffold_01:4679445..4680975 |
Strand | - |
Gene length (bp) | 1530 |
Transcript length (bp) | 1530 |
Coding sequence length (bp) | 1530 |
Protein length (aa) | 510 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00171 | Aldedh | Aldehyde dehydrogenase family | 2.8E-148 | 24 | 492 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016491 | oxidoreductase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 35 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01322 MASSSEIHTFHSGAPQPQSSDAAATFVSLNPATAQPLATIFTTTPRQLEDAISAAKAAFTGWSRTPASRRADILL RAAAILRRRNDEMALTETLDTGRALAETSAVDVVTGADVLEYYARLVGDGQPGQHTSLRPDAFVLTSQEPLGVCA AIGAWNYPIQIALWKSAPCLAAGNCLVYKPSEVTPLHAETLALVYIEAGLPPGVFNVVYGDGPSVGAPLVAHPDI AKVSFTGQVSTGCTVASEAARRMKSVTMELGGKSPLLILPDAEVDEAADVAMAANFFSTGQVCTNGTRVFVPDTL LARVEEALTDRCRHGIRMGIPREKDTNFGPVVSAVQRDKVQSYIRHGRDVDGARVLYDGSLDAQKTRPTADGFWV APIIFTDCTDGMRIAREEIFGPVMCILPYKTSGRPQDEWLPELIERANDTQLGLAAGVVSSDIGLAHEVVRQLQA GITWINTWGESPAEMPVGGWKMSGIGVENGHEGIRAYTRTKSTLVQLGKGACKGMFARL* |
Coding | >Ophcf2|01322 ATGGCTTCCTCCTCCGAGATCCATACCTTCCACTCGGGCGCGCCTCAGCCGCAGTCATCTGATGCCGCCGCCACC TTTGTCTCGCTCAACCCGGCCACCGCTCAGCCGCTTGCCACCATCTTCACCACGACGCCGCGGCAGCTGGAAGAC GCCATCTCAGCTGCCAAGGCCGCCTTCACCGGCTGGTCGCGGACCCCGGCATCGCGTCGGGCCGACATCCTGCTC CGAGCCGCCGCCATCCTGCGTCGTCGCAACGACGAGATGGCGCTCACGGAGACGCTCGACACGGGCCGTGCCTTG GCCGAGACGTCTGCCGTAGATGTCGTCACCGGTGCCGACGTGCTCGAATATTACGCCCGTCTTGTCGGAGACGGC CAGCCCGGGCAGCACACCAGCCTCCGGCCCGACGCCTTCGTCCTCACCAGCCAGGAGCCACTCGGCGTCTGTGCC GCCATCGGCGCCTGGAACTACCCGATTCAGATCGCCCTCTGGAAGTCTGCCCCCTGCCTGGCGGCCGGAAACTGT CTCGTCTACAAGCCCAGTGAGGTGACGCCCCTGCACGCCGAGACACTGGCCCTCGTATACATCGAGGCCGGCCTT CCCCCGGGCGTCTTCAATGTCGTCTACGGCGACGGACCCTCCGTGGGCGCTCCGCTCGTCGCCCACCCGGACATT GCAAAGGTCAGTTTCACCGGTCAGGTGTCGACGGGCTGCACGGTGGCGTCTGAAGCGGCCCGGCGGATGAAGTCG GTGACGATGGAGCTGGGCGGCAAGAGTCCGCTGCTGATACTTCCGGACGCCGAAGTCGACGAGGCCGCCGACGTG GCCATGGCGGCAAACTTCTTCTCGACCGGCCAAGTCTGCACCAACGGCACCCGCGTCTTCGTACCGGACACTCTG CTGGCTCGGGTCGAGGAGGCTCTGACGGACCGCTGCCGGCACGGGATCCGGATGGGCATCCCGCGCGAAAAGGAC ACCAACTTTGGGCCCGTCGTCAGCGCCGTCCAGCGAGACAAGGTGCAGTCGTATATCCGTCACGGCCGAGACGTC GACGGCGCACGCGTCCTCTACGACGGCTCACTTGACGCGCAGAAGACGCGACCGACGGCCGACGGCTTCTGGGTG GCGCCCATCATCTTCACCGACTGCACCGACGGCATGCGCATCGCCCGCGAGGAGATCTTTGGCCCCGTCATGTGT ATCCTGCCTTACAAGACGAGCGGTCGCCCGCAGGACGAGTGGCTGCCCGAGCTCATCGAAAGGGCCAACGACACG CAACTGGGACTGGCAGCTGGCGTCGTCTCGTCCGATATCGGTCTGGCTCATGAAGTGGTTCGCCAGCTGCAGGCT GGAATCACCTGGATCAACACCTGGGGCGAGTCGCCTGCCGAGATGCCCGTAGGAGGCTGGAAGATGAGCGGCATA GGGGTCGAGAACGGCCACGAGGGCATCCGGGCCTACACGCGGACCAAGAGTACGCTGGTGCAGCTGGGCAAGGGC GCCTGCAAGGGCATGTTTGCCCGGCTGTGA |
Transcript | >Ophcf2|01322 ATGGCTTCCTCCTCCGAGATCCATACCTTCCACTCGGGCGCGCCTCAGCCGCAGTCATCTGATGCCGCCGCCACC TTTGTCTCGCTCAACCCGGCCACCGCTCAGCCGCTTGCCACCATCTTCACCACGACGCCGCGGCAGCTGGAAGAC GCCATCTCAGCTGCCAAGGCCGCCTTCACCGGCTGGTCGCGGACCCCGGCATCGCGTCGGGCCGACATCCTGCTC CGAGCCGCCGCCATCCTGCGTCGTCGCAACGACGAGATGGCGCTCACGGAGACGCTCGACACGGGCCGTGCCTTG GCCGAGACGTCTGCCGTAGATGTCGTCACCGGTGCCGACGTGCTCGAATATTACGCCCGTCTTGTCGGAGACGGC CAGCCCGGGCAGCACACCAGCCTCCGGCCCGACGCCTTCGTCCTCACCAGCCAGGAGCCACTCGGCGTCTGTGCC GCCATCGGCGCCTGGAACTACCCGATTCAGATCGCCCTCTGGAAGTCTGCCCCCTGCCTGGCGGCCGGAAACTGT CTCGTCTACAAGCCCAGTGAGGTGACGCCCCTGCACGCCGAGACACTGGCCCTCGTATACATCGAGGCCGGCCTT CCCCCGGGCGTCTTCAATGTCGTCTACGGCGACGGACCCTCCGTGGGCGCTCCGCTCGTCGCCCACCCGGACATT GCAAAGGTCAGTTTCACCGGTCAGGTGTCGACGGGCTGCACGGTGGCGTCTGAAGCGGCCCGGCGGATGAAGTCG GTGACGATGGAGCTGGGCGGCAAGAGTCCGCTGCTGATACTTCCGGACGCCGAAGTCGACGAGGCCGCCGACGTG GCCATGGCGGCAAACTTCTTCTCGACCGGCCAAGTCTGCACCAACGGCACCCGCGTCTTCGTACCGGACACTCTG CTGGCTCGGGTCGAGGAGGCTCTGACGGACCGCTGCCGGCACGGGATCCGGATGGGCATCCCGCGCGAAAAGGAC ACCAACTTTGGGCCCGTCGTCAGCGCCGTCCAGCGAGACAAGGTGCAGTCGTATATCCGTCACGGCCGAGACGTC GACGGCGCACGCGTCCTCTACGACGGCTCACTTGACGCGCAGAAGACGCGACCGACGGCCGACGGCTTCTGGGTG GCGCCCATCATCTTCACCGACTGCACCGACGGCATGCGCATCGCCCGCGAGGAGATCTTTGGCCCCGTCATGTGT ATCCTGCCTTACAAGACGAGCGGTCGCCCGCAGGACGAGTGGCTGCCCGAGCTCATCGAAAGGGCCAACGACACG CAACTGGGACTGGCAGCTGGCGTCGTCTCGTCCGATATCGGTCTGGCTCATGAAGTGGTTCGCCAGCTGCAGGCT GGAATCACCTGGATCAACACCTGGGGCGAGTCGCCTGCCGAGATGCCCGTAGGAGGCTGGAAGATGAGCGGCATA GGGGTCGAGAACGGCCACGAGGGCATCCGGGCCTACACGCGGACCAAGAGTACGCTGGTGCAGCTGGGCAAGGGC GCCTGCAAGGGCATGTTTGCCCGGCTGTGA |
Gene | >Ophcf2|01322 ATGGCTTCCTCCTCCGAGATCCATACCTTCCACTCGGGCGCGCCTCAGCCGCAGTCATCTGATGCCGCCGCCACC TTTGTCTCGCTCAACCCGGCCACCGCTCAGCCGCTTGCCACCATCTTCACCACGACGCCGCGGCAGCTGGAAGAC GCCATCTCAGCTGCCAAGGCCGCCTTCACCGGCTGGTCGCGGACCCCGGCATCGCGTCGGGCCGACATCCTGCTC CGAGCCGCCGCCATCCTGCGTCGTCGCAACGACGAGATGGCGCTCACGGAGACGCTCGACACGGGCCGTGCCTTG GCCGAGACGTCTGCCGTAGATGTCGTCACCGGTGCCGACGTGCTCGAATATTACGCCCGTCTTGTCGGAGACGGC CAGCCCGGGCAGCACACCAGCCTCCGGCCCGACGCCTTCGTCCTCACCAGCCAGGAGCCACTCGGCGTCTGTGCC GCCATCGGCGCCTGGAACTACCCGATTCAGATCGCCCTCTGGAAGTCTGCCCCCTGCCTGGCGGCCGGAAACTGT CTCGTCTACAAGCCCAGTGAGGTGACGCCCCTGCACGCCGAGACACTGGCCCTCGTATACATCGAGGCCGGCCTT CCCCCGGGCGTCTTCAATGTCGTCTACGGCGACGGACCCTCCGTGGGCGCTCCGCTCGTCGCCCACCCGGACATT GCAAAGGTCAGTTTCACCGGTCAGGTGTCGACGGGCTGCACGGTGGCGTCTGAAGCGGCCCGGCGGATGAAGTCG GTGACGATGGAGCTGGGCGGCAAGAGTCCGCTGCTGATACTTCCGGACGCCGAAGTCGACGAGGCCGCCGACGTG GCCATGGCGGCAAACTTCTTCTCGACCGGCCAAGTCTGCACCAACGGCACCCGCGTCTTCGTACCGGACACTCTG CTGGCTCGGGTCGAGGAGGCTCTGACGGACCGCTGCCGGCACGGGATCCGGATGGGCATCCCGCGCGAAAAGGAC ACCAACTTTGGGCCCGTCGTCAGCGCCGTCCAGCGAGACAAGGTGCAGTCGTATATCCGTCACGGCCGAGACGTC GACGGCGCACGCGTCCTCTACGACGGCTCACTTGACGCGCAGAAGACGCGACCGACGGCCGACGGCTTCTGGGTG GCGCCCATCATCTTCACCGACTGCACCGACGGCATGCGCATCGCCCGCGAGGAGATCTTTGGCCCCGTCATGTGT ATCCTGCCTTACAAGACGAGCGGTCGCCCGCAGGACGAGTGGCTGCCCGAGCTCATCGAAAGGGCCAACGACACG CAACTGGGACTGGCAGCTGGCGTCGTCTCGTCCGATATCGGTCTGGCTCATGAAGTGGTTCGCCAGCTGCAGGCT GGAATCACCTGGATCAACACCTGGGGCGAGTCGCCTGCCGAGATGCCCGTAGGAGGCTGGAAGATGAGCGGCATA GGGGTCGAGAACGGCCACGAGGGCATCCGGGCCTACACGCGGACCAAGAGTACGCTGGTGCAGCTGGGCAAGGGC GCCTGCAAGGGCATGTTTGCCCGGCTGTGA |