Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01321
Gene name
Locationscaffold_01:4676256..4677544
Strand-
Gene length (bp)1288
Transcript length (bp)1182
Coding sequence length (bp)1182
Protein length (aa) 394

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 67 89 22
3 111 133 22
4 146 168 22
5 199 221 22
6 234 256 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01321
MSDRRRINEAVAAGNVPPDISADFLAESRDGPAMVAIMLITTLTAGLVICRLLARTLMLQRFGVDDGLALASLLT
LAAFVGLAMELIQLGSGRHYAYIQYVLPLSTVETTQVLDFAAHILYTVALLLCRVSGLAFYHRVCSLHRGFLVAI
QVVFGLLMAGFLPQLLLIVFHCRPVTTLWPYGWEPGSEEFTCLQWGVVYVTNSTISLTCDMLLFGIPVAMLRILE
MSQKRKIQLGCILLPGVAVVAISITRLVLVVIGQWETDMSWSYNALLTVEVSEIGATLIALSVPGVKPIVDRFLL
GRGTVLHMATAGGSRCVPNNKASSLTSKHGTALSTLKLRSDYSVLGAETAANYGTEVSAGSQGNNISQEGIHVTV
DFRVNDGEAKRFAAMQGV*
Coding >Ophcf2|01321
ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC
GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC
CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG
CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC
GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG
CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA
CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC
ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC
ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG
ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCAGTCGTTGCCATCTCCATCACC
CGTCTCGTCCTCGTCGTCATCGGTCAATGGGAGACAGACATGTCCTGGAGCTACAACGCGCTCCTGACCGTCGAA
GTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGGCGTCAAGCCCATCGTCGACCGCTTCCTCCTC
GGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCGTTGCGTGCCGAACAACAAGGCCAGCAGCCTG
ACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTCTGATTATAGCGTTCTCGGGGCTGAGACGGCG
GCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAACATCAGTCAGGAGGGGATTCACGTCACTGTT
GATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCATGCAGGGGGTATGA
Transcript >Ophcf2|01321
ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC
GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC
CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG
CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC
GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG
CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA
CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC
ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC
ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG
ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCAGTCGTTGCCATCTCCATCACC
CGTCTCGTCCTCGTCGTCATCGGTCAATGGGAGACAGACATGTCCTGGAGCTACAACGCGCTCCTGACCGTCGAA
GTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGGCGTCAAGCCCATCGTCGACCGCTTCCTCCTC
GGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCGTTGCGTGCCGAACAACAAGGCCAGCAGCCTG
ACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTCTGATTATAGCGTTCTCGGGGCTGAGACGGCG
GCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAACATCAGTCAGGAGGGGATTCACGTCACTGTT
GATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCATGCAGGGGGTATGA
Gene >Ophcf2|01321
ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC
GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC
CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG
CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC
GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG
CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA
CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC
ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC
ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG
ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCGTGAGTTACAACGGGGATGATT
TGGGAAAGGGAGAGACGGGCTGACGAGGAAAGCCAGAGTCGTTGCCATCTCCATCACCCGTCTCGTCCTCGTCGT
CATCGGTCAATGTAAGTCAAACAGTCCCAGAAGGCGAACATCATCTGACCCAGGCGCAGGGGAGACAGACATGTC
CTGGAGCTACAACGCGCTCCTGACCGTCGAAGTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGG
CGTCAAGCCCATCGTCGACCGCTTCCTCCTCGGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCG
TTGCGTGCCGAACAACAAGGCCAGCAGCCTGACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTC
TGATTATAGCGTTCTCGGGGCTGAGACGGCGGCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAA
CATCAGTCAGGAGGGGATTCACGTCACTGTTGATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCAT
GCAGGGGGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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