Protein ID | Ophcf2|01321 |
Gene name | |
Location | scaffold_01:4676256..4677544 |
Strand | - |
Gene length (bp) | 1288 |
Transcript length (bp) | 1182 |
Coding sequence length (bp) | 1182 |
Protein length (aa) | 394 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 65 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 32 | 54 | 22 |
2 | 67 | 89 | 22 |
3 | 111 | 133 | 22 |
4 | 146 | 168 | 22 |
5 | 199 | 221 | 22 |
6 | 234 | 256 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01321 MSDRRRINEAVAAGNVPPDISADFLAESRDGPAMVAIMLITTLTAGLVICRLLARTLMLQRFGVDDGLALASLLT LAAFVGLAMELIQLGSGRHYAYIQYVLPLSTVETTQVLDFAAHILYTVALLLCRVSGLAFYHRVCSLHRGFLVAI QVVFGLLMAGFLPQLLLIVFHCRPVTTLWPYGWEPGSEEFTCLQWGVVYVTNSTISLTCDMLLFGIPVAMLRILE MSQKRKIQLGCILLPGVAVVAISITRLVLVVIGQWETDMSWSYNALLTVEVSEIGATLIALSVPGVKPIVDRFLL GRGTVLHMATAGGSRCVPNNKASSLTSKHGTALSTLKLRSDYSVLGAETAANYGTEVSAGSQGNNISQEGIHVTV DFRVNDGEAKRFAAMQGV* |
Coding | >Ophcf2|01321 ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCAGTCGTTGCCATCTCCATCACC CGTCTCGTCCTCGTCGTCATCGGTCAATGGGAGACAGACATGTCCTGGAGCTACAACGCGCTCCTGACCGTCGAA GTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGGCGTCAAGCCCATCGTCGACCGCTTCCTCCTC GGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCGTTGCGTGCCGAACAACAAGGCCAGCAGCCTG ACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTCTGATTATAGCGTTCTCGGGGCTGAGACGGCG GCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAACATCAGTCAGGAGGGGATTCACGTCACTGTT GATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCATGCAGGGGGTATGA |
Transcript | >Ophcf2|01321 ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCAGTCGTTGCCATCTCCATCACC CGTCTCGTCCTCGTCGTCATCGGTCAATGGGAGACAGACATGTCCTGGAGCTACAACGCGCTCCTGACCGTCGAA GTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGGCGTCAAGCCCATCGTCGACCGCTTCCTCCTC GGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCGTTGCGTGCCGAACAACAAGGCCAGCAGCCTG ACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTCTGATTATAGCGTTCTCGGGGCTGAGACGGCG GCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAACATCAGTCAGGAGGGGATTCACGTCACTGTT GATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCATGCAGGGGGTATGA |
Gene | >Ophcf2|01321 ATGAGCGACAGGCGCCGCATCAACGAGGCCGTAGCAGCAGGCAACGTTCCCCCGGACATCAGCGCCGACTTCCTC GCCGAAAGCCGCGACGGCCCAGCAATGGTAGCCATAATGCTCATCACGACACTGACGGCCGGCCTCGTCATCTGC CGTCTTCTCGCCCGAACGCTGATGCTCCAACGGTTCGGCGTGGACGACGGTCTGGCCCTCGCCTCGCTCCTCACG CTGGCCGCCTTCGTCGGTCTAGCCATGGAGCTCATCCAGCTCGGATCGGGAAGACACTACGCTTACATCCAGTAC GTGCTCCCTCTCTCAACCGTCGAGACGACTCAGGTTCTCGACTTCGCGGCCCATATCCTCTACACCGTCGCGCTG CTTCTCTGCCGCGTCTCGGGCCTGGCCTTTTACCACCGCGTGTGCAGCTTGCATCGGGGCTTCCTCGTCGCCATA CAGGTTGTTTTCGGGCTGTTGATGGCTGGGTTTTTGCCGCAGCTTTTGCTCATCGTCTTTCATTGTCGGCCTGTC ACGACGCTTTGGCCTTATGGGTGGGAGCCTGGGAGTGAGGAGTTTACGTGTTTGCAGTGGGGGGTTGTCTATGTC ACGAACTCGACGATTTCGTTGACGTGCGACATGCTGCTTTTCGGTATTCCAGTTGCTATGCTGCGGATCCTGGAG ATGTCGCAGAAGCGCAAGATTCAGCTGGGCTGCATTCTGTTGCCGGGCGTTGCGTGAGTTACAACGGGGATGATT TGGGAAAGGGAGAGACGGGCTGACGAGGAAAGCCAGAGTCGTTGCCATCTCCATCACCCGTCTCGTCCTCGTCGT CATCGGTCAATGTAAGTCAAACAGTCCCAGAAGGCGAACATCATCTGACCCAGGCGCAGGGGAGACAGACATGTC CTGGAGCTACAACGCGCTCCTGACCGTCGAAGTCTCCGAAATCGGCGCAACACTCATCGCCCTATCCGTCCCCGG CGTCAAGCCCATCGTCGACCGCTTCCTCCTCGGCCGGGGCACCGTCTTGCACATGGCCACGGCCGGCGGTTCGCG TTGCGTGCCGAACAACAAGGCCAGCAGCCTGACTTCCAAGCACGGGACGGCGCTGAGCACGCTGAAGCTGCGGTC TGATTATAGCGTTCTCGGGGCTGAGACGGCGGCCAACTATGGGACTGAGGTTAGTGCTGGCTCGCAGGGGAATAA CATCAGTCAGGAGGGGATTCACGTCACTGTTGATTTTCGTGTCAATGATGGTGAGGCGAAGAGGTTTGCTGCCAT GCAGGGGGTATGA |