Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01307
Gene name
Locationscaffold_01:4644223..4645633
Strand+
Gene length (bp)1410
Transcript length (bp)1320
Coding sequence length (bp)1320
Protein length (aa) 440

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10445 DUF2456 Protein of unknown function (DUF2456) 9.3E-20 148 222

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 40 62 22
2 88 110 22
3 130 152 22
4 162 184 22
5 205 227 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01307
MRWPNKIRASSPARDDESGPHVVLSGKRLMPTAGMSGYQFLYIFILDGVGGLILSGGINFAIAYGLYKNTNDPVR
LFQLPNTLAGDGAVTIFVQCLITWLIESILVTYDVNHGSVRTIGWIREPRNRLLRSFFLLPADPLLGASRLTFFG
FIPIIQFIIRGLLFGVASFLLFWPICVGILAGIGQRRADGDYYYDNVWTPQVYKLLLGGLLGLVTGPPMAMFWLV
RYGWEAQAAIRCAEEAAVRYAEEEAARVSGQEGVSSPAFARPSEDARRAAASKVDLSKKDDGKPSEEVATGSESD
IEDDKPKQLEASTEVRKAAESDAASSQGESANQDRQSSAEEFEASGEGTPRPLTEMESRPFHDAEEELAMEFSSP
RESVIRPDEAWHGVSEKPAPVRGFDDADSPVINEKVAALESGIKGSPVVDTSGHGQGFDETAAS*
Coding >Ophcf2|01307
ATGCGGTGGCCCAACAAGATACGCGCCTCGTCACCGGCTCGCGATGACGAGAGCGGTCCGCATGTTGTGCTTTCG
GGCAAGAGGTTGATGCCCACGGCCGGCATGTCGGGATATCAATTCTTGTACATCTTTATTCTTGATGGGGTGGGA
GGTTTGATTCTCTCGGGTGGTATCAACTTTGCCATTGCCTATGGGCTTTATAAGAACACAAACGATCCCGTCCGT
CTCTTCCAGTTGCCCAACACGTTGGCTGGGGATGGCGCCGTCACCATCTTCGTTCAGTGTCTCATCACTTGGCTC
ATCGAAAGCATCCTCGTAACCTACGATGTCAATCACGGATCCGTCCGCACCATCGGCTGGATCCGCGAGCCCCGG
AATCGTCTTCTCCGGTCCTTTTTCCTGCTTCCCGCCGATCCTCTCCTCGGCGCGTCTCGGCTCACTTTCTTCGGA
TTTATACCCATCATCCAGTTCATCATCCGCGGTCTGCTGTTCGGCGTCGCCTCATTTCTCCTCTTCTGGCCCATC
TGCGTCGGTATTCTGGCTGGTATAGGCCAACGCCGTGCGGACGGAGATTATTACTACGATAACGTCTGGACGCCG
CAGGTTTATAAGCTGCTGCTCGGCGGCCTCCTCGGCCTCGTCACCGGTCCTCCCATGGCCATGTTTTGGCTAGTC
AGATACGGCTGGGAGGCGCAGGCGGCCATTCGCTGCGCCGAGGAAGCAGCTGTGCGATACGCCGAGGAGGAGGCC
GCGAGAGTCAGCGGCCAAGAGGGCGTCTCGTCGCCTGCCTTCGCACGCCCGTCGGAAGATGCGAGGAGAGCGGCT
GCTTCCAAGGTTGACCTGTCGAAGAAAGACGATGGGAAGCCGTCTGAAGAGGTGGCGACCGGGTCCGAGTCGGAT
ATCGAAGACGACAAGCCGAAGCAGCTCGAGGCATCTACCGAGGTCCGGAAAGCGGCCGAAAGCGACGCGGCGTCG
AGTCAGGGAGAGAGTGCCAATCAGGACCGGCAAAGCTCGGCAGAAGAATTCGAAGCATCGGGAGAGGGAACCCCG
AGGCCGTTGACCGAGATGGAGAGCAGGCCTTTTCACGACGCAGAAGAGGAGCTGGCCATGGAGTTTTCGTCACCG
AGAGAGAGCGTCATACGGCCCGACGAGGCGTGGCACGGGGTCAGCGAGAAGCCGGCGCCAGTTCGAGGATTTGAC
GATGCCGATTCGCCCGTCATCAACGAAAAGGTGGCGGCTCTCGAGAGCGGTATAAAGGGCTCGCCGGTTGTCGAC
ACCTCCGGTCACGGCCAAGGGTTTGACGAGACAGCCGCGTCATGA
Transcript >Ophcf2|01307
ATGCGGTGGCCCAACAAGATACGCGCCTCGTCACCGGCTCGCGATGACGAGAGCGGTCCGCATGTTGTGCTTTCG
GGCAAGAGGTTGATGCCCACGGCCGGCATGTCGGGATATCAATTCTTGTACATCTTTATTCTTGATGGGGTGGGA
GGTTTGATTCTCTCGGGTGGTATCAACTTTGCCATTGCCTATGGGCTTTATAAGAACACAAACGATCCCGTCCGT
CTCTTCCAGTTGCCCAACACGTTGGCTGGGGATGGCGCCGTCACCATCTTCGTTCAGTGTCTCATCACTTGGCTC
ATCGAAAGCATCCTCGTAACCTACGATGTCAATCACGGATCCGTCCGCACCATCGGCTGGATCCGCGAGCCCCGG
AATCGTCTTCTCCGGTCCTTTTTCCTGCTTCCCGCCGATCCTCTCCTCGGCGCGTCTCGGCTCACTTTCTTCGGA
TTTATACCCATCATCCAGTTCATCATCCGCGGTCTGCTGTTCGGCGTCGCCTCATTTCTCCTCTTCTGGCCCATC
TGCGTCGGTATTCTGGCTGGTATAGGCCAACGCCGTGCGGACGGAGATTATTACTACGATAACGTCTGGACGCCG
CAGGTTTATAAGCTGCTGCTCGGCGGCCTCCTCGGCCTCGTCACCGGTCCTCCCATGGCCATGTTTTGGCTAGTC
AGATACGGCTGGGAGGCGCAGGCGGCCATTCGCTGCGCCGAGGAAGCAGCTGTGCGATACGCCGAGGAGGAGGCC
GCGAGAGTCAGCGGCCAAGAGGGCGTCTCGTCGCCTGCCTTCGCACGCCCGTCGGAAGATGCGAGGAGAGCGGCT
GCTTCCAAGGTTGACCTGTCGAAGAAAGACGATGGGAAGCCGTCTGAAGAGGTGGCGACCGGGTCCGAGTCGGAT
ATCGAAGACGACAAGCCGAAGCAGCTCGAGGCATCTACCGAGGTCCGGAAAGCGGCCGAAAGCGACGCGGCGTCG
AGTCAGGGAGAGAGTGCCAATCAGGACCGGCAAAGCTCGGCAGAAGAATTCGAAGCATCGGGAGAGGGAACCCCG
AGGCCGTTGACCGAGATGGAGAGCAGGCCTTTTCACGACGCAGAAGAGGAGCTGGCCATGGAGTTTTCGTCACCG
AGAGAGAGCGTCATACGGCCCGACGAGGCGTGGCACGGGGTCAGCGAGAAGCCGGCGCCAGTTCGAGGATTTGAC
GATGCCGATTCGCCCGTCATCAACGAAAAGGTGGCGGCTCTCGAGAGCGGTATAAAGGGCTCGCCGGTTGTCGAC
ACCTCCGGTCACGGCCAAGGGTTTGACGAGACAGCCGCGTCATGA
Gene >Ophcf2|01307
ATGCGGTGGCCCAACAAGATACGCGCCTCGTCACCGGCTCGCGATGACGAGAGCGGTCCGCATGTTGTGCTTTCG
GGCAAGAGGTTGATGCCCACGGCCGGCATGTCGGGATATCAATTCTTGTACATCTTTATTCTTGATGGGGTGGGA
GGTTTGATTCTCTCGGGTGGTATCAACTTTGCCATTGCCTATGGTTAGCTGCTCTGCTCCTGCTCTGCTCCTGCT
CTGCTCTGCTCTGCTCTTCTGTCTCTCATGTTTCGAGGAATTGACTTTCAGAACTCAGGGCTTTATAAGAACACA
AACGATCCCGTCCGTCTCTTCCAGTTGCCCAACACGTTGGCTGGGGATGGCGCCGTCACCATCTTCGTTCAGTGT
CTCATCACTTGGCTCATCGAAAGCATCCTCGTAACCTACGATGTCAATCACGGATCCGTCCGCACCATCGGCTGG
ATCCGCGAGCCCCGGAATCGTCTTCTCCGGTCCTTTTTCCTGCTTCCCGCCGATCCTCTCCTCGGCGCGTCTCGG
CTCACTTTCTTCGGATTTATACCCATCATCCAGTTCATCATCCGCGGTCTGCTGTTCGGCGTCGCCTCATTTCTC
CTCTTCTGGCCCATCTGCGTCGGTATTCTGGCTGGTATAGGCCAACGCCGTGCGGACGGAGATTATTACTACGAT
AACGTCTGGACGCCGCAGGTTTATAAGCTGCTGCTCGGCGGCCTCCTCGGCCTCGTCACCGGTCCTCCCATGGCC
ATGTTTTGGCTAGTCAGATACGGCTGGGAGGCGCAGGCGGCCATTCGCTGCGCCGAGGAAGCAGCTGTGCGATAC
GCCGAGGAGGAGGCCGCGAGAGTCAGCGGCCAAGAGGGCGTCTCGTCGCCTGCCTTCGCACGCCCGTCGGAAGAT
GCGAGGAGAGCGGCTGCTTCCAAGGTTGACCTGTCGAAGAAAGACGATGGGAAGCCGTCTGAAGAGGTGGCGACC
GGGTCCGAGTCGGATATCGAAGACGACAAGCCGAAGCAGCTCGAGGCATCTACCGAGGTCCGGAAAGCGGCCGAA
AGCGACGCGGCGTCGAGTCAGGGAGAGAGTGCCAATCAGGACCGGCAAAGCTCGGCAGAAGAATTCGAAGCATCG
GGAGAGGGAACCCCGAGGCCGTTGACCGAGATGGAGAGCAGGCCTTTTCACGACGCAGAAGAGGAGCTGGCCATG
GAGTTTTCGTCACCGAGAGAGAGCGTCATACGGCCCGACGAGGCGTGGCACGGGGTCAGCGAGAAGCCGGCGCCA
GTTCGAGGATTTGACGATGCCGATTCGCCCGTCATCAACGAAAAGGTGGCGGCTCTCGAGAGCGGTATAAAGGGC
TCGCCGGTTGTCGACACCTCCGGTCACGGCCAAGGGTTTGACGAGACAGCCGCGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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