Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01299
Gene name
Locationscaffold_01:4620755..4621857
Strand+
Gene length (bp)1102
Transcript length (bp)972
Coding sequence length (bp)972
Protein length (aa) 324

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.9E-13 87 169

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19
2 288 307 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01299
MASSYVRLRRLILSLVFIAIVFSLVFRVAVSVNRIFGAHAGNALTQEQVRAAAEAAASRGHRRKRPVPRILHQVF
HNWHQPGNETLPPDWQAARQTCLDLHPTWEHKLWTELASREFIRSEYPYFLDTYDGFKFPVQRIDALRYFLMRHF
GGIYMDLDNGCRANLDPLLYYPAWVTDGGQGTLSNNILGAEPEHPFWILMTDTLGLWARDFLLPYITISYASGQW
YETEMWQIYHARKPPTEPDLLRVMMDMRPSGAPWVFFTAGRGGTWDNWDNQVLGWMGNHLPRLMLYMAASAGLVA
GAWYLVGQRRRYQRLANGPSLSP*
Coding >Ophcf2|01299
ATGGCCTCGTCTTACGTCCGTCTGAGGCGCCTCATCCTCAGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TTCCGGGTCGCCGTCTCCGTGAATCGCATCTTCGGAGCTCACGCCGGCAACGCCCTTACCCAGGAGCAGGTTCGT
GCCGCCGCCGAAGCCGCCGCCTCCAGGGGTCACAGGCGTAAGAGGCCAGTACCGCGCATCCTTCATCAGGTCTTC
CATAACTGGCACCAGCCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGCTCTGGACCGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTATCCCTACTTC
CTCGACACGTATGATGGCTTCAAGTTTCCCGTCCAGCGCATCGACGCCTTGCGTTACTTTCTCATGAGGCATTTC
GGCGGCATCTACATGGATCTCGACAACGGCTGCCGTGCTAACCTCGACCCGCTCCTCTACTACCCAGCTTGGGTC
ACCGACGGCGGCCAAGGCACCCTCAGCAACAACATCCTCGGTGCCGAGCCCGAGCACCCCTTTTGGATCCTCATG
ACCGACACCCTGGGCCTCTGGGCTCGCGACTTCCTTCTGCCCTACATCACCATCAGCTACGCCAGCGGCCAGTGG
TACGAGACGGAGATGTGGCAGATCTACCACGCCCGCAAGCCGCCGACGGAGCCCGATCTCTTGCGCGTCATGATG
GACATGCGTCCCTCGGGCGCCCCCTGGGTCTTCTTCACCGCTGGACGCGGCGGCACCTGGGATAACTGGGACAAT
CAGGTGCTCGGCTGGATGGGGAACCATCTGCCCCGGTTGATGCTATACATGGCCGCCTCGGCTGGCCTTGTTGCC
GGCGCCTGGTACCTCGTCGGTCAGCGAAGACGATATCAAAGACTGGCGAACGGACCCTCTCTTTCTCCCTAG
Transcript >Ophcf2|01299
ATGGCCTCGTCTTACGTCCGTCTGAGGCGCCTCATCCTCAGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TTCCGGGTCGCCGTCTCCGTGAATCGCATCTTCGGAGCTCACGCCGGCAACGCCCTTACCCAGGAGCAGGTTCGT
GCCGCCGCCGAAGCCGCCGCCTCCAGGGGTCACAGGCGTAAGAGGCCAGTACCGCGCATCCTTCATCAGGTCTTC
CATAACTGGCACCAGCCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGCTCTGGACCGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTATCCCTACTTC
CTCGACACGTATGATGGCTTCAAGTTTCCCGTCCAGCGCATCGACGCCTTGCGTTACTTTCTCATGAGGCATTTC
GGCGGCATCTACATGGATCTCGACAACGGCTGCCGTGCTAACCTCGACCCGCTCCTCTACTACCCAGCTTGGGTC
ACCGACGGCGGCCAAGGCACCCTCAGCAACAACATCCTCGGTGCCGAGCCCGAGCACCCCTTTTGGATCCTCATG
ACCGACACCCTGGGCCTCTGGGCTCGCGACTTCCTTCTGCCCTACATCACCATCAGCTACGCCAGCGGCCAGTGG
TACGAGACGGAGATGTGGCAGATCTACCACGCCCGCAAGCCGCCGACGGAGCCCGATCTCTTGCGCGTCATGATG
GACATGCGTCCCTCGGGCGCCCCCTGGGTCTTCTTCACCGCTGGACGCGGCGGCACCTGGGATAACTGGGACAAT
CAGGTGCTCGGCTGGATGGGGAACCATCTGCCCCGGTTGATGCTATACATGGCCGCCTCGGCTGGCCTTGTTGCC
GGCGCCTGGTACCTCGTCGGTCAGCGAAGACGATATCAAAGACTGGCGAACGGACCCTCTCTTTCTCCCTAG
Gene >Ophcf2|01299
ATGGCCTCGTCTTACGTCCGTCTGAGGCGCCTCATCCTCAGCCTCGTCTTCATCGCCATCGTCTTCAGCCTCGTC
TTCCGGGTCGCCGTCTCCGTGAATCGCATCTTCGGAGCTCACGCCGGCAACGCCCTTACCCAGGAGCAGGTTCGT
GCCGCCGCCGAAGCCGCCGCCTCCAGGGGTCACAGGCGTAAGAGGCCAGTACCGCGCATCCTTCATCAGGTCTTC
CATAACTGGCACCAGCCGGGCAACGAGACGCTGCCGCCGGATTGGCAGGCTGCTCGCCAGACCTGTCTCGACCTA
CATCCTACCTGGGAGCACAAGGTGAGGCTCTCGACGGTTGTCTCTCCTGTCGGCTGACGGTACCGCAAGCTCTGG
ACCGAACTGGCGTCTCGCGAATTCATCCGATCCGAGTATCCCTACTTCCTCGACACGTATGATGGCTTCAAGTTT
CCCGTCCAGCGCATCGACGCCTTGCGTTACTTTCTCATGAGGCATTTCGGCGGCATCTACATGGATCTCGACAAC
GTACTTGGACCCCCACTCCGTCTCTCATCGACCCAAGGCTACAAGAATCATATCCGCTGACCGTCTTCCTTCTCC
CCGTCAGGGCTGCCGTGCTAACCTCGACCCGCTCCTCTACTACCCAGCTTGGGTCACCGACGGCGGCCAAGGCAC
CCTCAGCAACAACATCCTCGGTGCCGAGCCCGAGCACCCCTTTTGGATCCTCATGACCGACACCCTGGGCCTCTG
GGCTCGCGACTTCCTTCTGCCCTACATCACCATCAGCTACGCCAGCGGCCAGTGGTACGAGACGGAGATGTGGCA
GATCTACCACGCCCGCAAGCCGCCGACGGAGCCCGATCTCTTGCGCGTCATGATGGACATGCGTCCCTCGGGCGC
CCCCTGGGTCTTCTTCACCGCTGGACGCGGCGGCACCTGGGATAACTGGGACAATCAGGTGCTCGGCTGGATGGG
GAACCATCTGCCCCGGTTGATGCTATACATGGCCGCCTCGGCTGGCCTTGTTGCCGGCGCCTGGTACCTCGTCGG
TCAGCGAAGACGATATCAAAGACTGGCGAACGGACCCTCTCTTTCTCCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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