Fungal Genomics

General Properties

Protein ID	Ophcf2|01265
Gene name
Location	scaffold_01:4536052..4538449
Strand	+
Gene length (bp)	2397
Transcript length (bp)	1008
Coding sequence length (bp)	1008
Protein length (aa)	336

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01393	Chromo_shadow	Chromo shadow domain	5.8E-17	190	244
PF00385	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	9.5E-12	77	129

GO

GO Term	Description	Terminal node
GO:0005634	nucleus	Yes
GO:0005575	cellular_component	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0043227	membrane-bounded organelle	No
GO:0043229	intracellular organelle	No
GO:0110165	cellular anatomical entity	No
GO:0043226	organelle	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Nucleus	Nuclear localization signal	0.2292	0.7178	0.0918	0.1168	0.0613	0.0512	0.0996	0.0772	0.0896	0.0042

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	284	303	19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	141.02	80.10	201.93
Alive	In ants, during behavior modification	494.86	221.21	768.51
Dead	In ants, recently dead	401.34	202.13	600.55

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.000238	yes
Alive	Dead	0.309475	no
Dead	Fungus	0.000238	yes

Orthologs

Orthofinder run ID	4
Orthogroup	4196
Change Orthofinder run	4: Insect Pathogens

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2|4650
Ophiocordyceps australis map64 (Brazil)	OphauB2|4585
Ophiocordyceps camponoti-floridani	Ophcf2|01265 (this protein)
Ophiocordyceps camponoti-rufipedis	Ophun1|802
Ophiocordyceps kimflemingae	Ophio5|8488
Ophiocordyceps subramaniannii	Hirsu2|8528

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2|01265 MPPALSDDAASDDLEPRPAASVSVEDEEEEDDVASDPEPPRKTDLKPKTSATPKDESEEVEEDEGDDDDEDLGED EFIVEAIKKHMVDADGSLKFLVKWEGYNKKSDMTWEPEDNLMESASDILAQYYNQIGGRDSIFEESQVASRSKKR GRASTGTPSTTKRPRKNGLHPADSTPPASARKWSPPAGSWEDEIESIDACHDEGSGKLAVYLIWNNGKKTKHDTT VVYKKCPQKMLQFYERHIKVIREENLAAGISSLPPPPPINTTHHTTTTTTTEMVQRNHVVAIIIIVIFVILALVA FGIAKMVTTARKDLTEHSLSSESSESSQEDIVDDD*
Coding	>Ophcf2|01265 ATGCCTCCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCCCCGGCCAGCCGCGTCAGTGTCTGTTGAA GACGAGGAGGAAGAAGACGATGTCGCCAGCGATCCCGAACCCCCGCGAAAGACGGACTTGAAGCCAAAGACCTCG GCTACGCCTAAGGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGACGACGACGATGAAGATCTTGGCGAGGAT GAATTCATCGTCGAGGCTATCAAGAAGCACATGGTAGACGCAGATGGCTCTCTCAAGTTTCTAGTCAAGTGGGAA GGCTATAACAAGAAGTCGGACATGACGTGGGAGCCAGAAGATAATCTTATGGAGTCTGCGTCGGACATTCTGGCC CAGTACTACAACCAGATTGGCGGTCGCGACAGCATCTTCGAAGAGTCGCAAGTGGCATCTCGCAGCAAGAAGCGC GGGCGCGCATCGACCGGGACGCCCTCGACGACGAAGCGACCGCGGAAGAACGGGCTTCACCCAGCCGACTCGACG CCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCTGGGTCTTGGGAAGACGAGATTGAGTCCATCGACGCGTGT CACGATGAGGGCAGCGGCAAGCTGGCCGTCTACCTGATCTGGAACAATGGGAAGAAGACGAAGCACGACACGACG GTCGTCTACAAGAAGTGTCCGCAAAAGATGCTCCAGTTCTACGAGCGGCACATCAAGGTCATCCGCGAAGAGAAC CTTGCAGCGGGCATCTCCTCACTCCCACCCCCCCCCCCAATCAACACAACACATCACACCACCACCACCACCACC ACCGAAATGGTGCAGCGAAACCACGTGGTAGCCATCATCATCATCGTCATCTTCGTCATCCTCGCCCTCGTGGCC TTTGGCATCGCCAAGATGGTGACGACGGCGCGCAAAGACTTGACGGAGCATTCACTTTCGAGCGAGAGTAGTGAA TCTTCGCAGGAGGATATCGTCGATGATGACTGA
Transcript	>Ophcf2|01265 ATGCCTCCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCCCCGGCCAGCCGCGTCAGTGTCTGTTGAA GACGAGGAGGAAGAAGACGATGTCGCCAGCGATCCCGAACCCCCGCGAAAGACGGACTTGAAGCCAAAGACCTCG GCTACGCCTAAGGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGACGACGACGATGAAGATCTTGGCGAGGAT GAATTCATCGTCGAGGCTATCAAGAAGCACATGGTAGACGCAGATGGCTCTCTCAAGTTTCTAGTCAAGTGGGAA GGCTATAACAAGAAGTCGGACATGACGTGGGAGCCAGAAGATAATCTTATGGAGTCTGCGTCGGACATTCTGGCC CAGTACTACAACCAGATTGGCGGTCGCGACAGCATCTTCGAAGAGTCGCAAGTGGCATCTCGCAGCAAGAAGCGC GGGCGCGCATCGACCGGGACGCCCTCGACGACGAAGCGACCGCGGAAGAACGGGCTTCACCCAGCCGACTCGACG CCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCTGGGTCTTGGGAAGACGAGATTGAGTCCATCGACGCGTGT CACGATGAGGGCAGCGGCAAGCTGGCCGTCTACCTGATCTGGAACAATGGGAAGAAGACGAAGCACGACACGACG GTCGTCTACAAGAAGTGTCCGCAAAAGATGCTCCAGTTCTACGAGCGGCACATCAAGGTCATCCGCGAAGAGAAC CTTGCAGCGGGCATCTCCTCACTCCCACCCCCCCCCCCAATCAACACAACACATCACACCACCACCACCACCACC ACCGAAATGGTGCAGCGAAACCACGTGGTAGCCATCATCATCATCGTCATCTTCGTCATCCTCGCCCTCGTGGCC TTTGGCATCGCCAAGATGGTGACGACGGCGCGCAAAGACTTGACGGAGCATTCACTTTCGAGCGAGAGTAGTGAA TCTTCGCAGGAGGATATCGTCGATGATGACTGA
Gene	>Ophcf2|01265 ATGCCTCCAGGTCTGTTCCGCCGCTACTCACCGCCTTTTGCCCTCCGCCCTTCCCCCGCCCCTCTTTGCGCTCTC TCGCTTTCTCTTGTTGTATGGAAACATTCAGAGGGTCACCTCCCCTTTGCCGCGCCCATCTCCCCCACAGAGAGA AAGTAAACCCTTAGCACCTTTCCACGCGCCTCGCTTCACTCTTTACTATGCCGCGTAAAAGACGTGTCGCTAAAC GCGCTGCAGCTCTTAGCGACGACGCGGCGTCGGATGACCTCGAGCCCCGGCCAGCCGCGTCAGTGTCTGTTGAAG ACGAGGAGGAAGAAGACGATGTCGCCAGCGATCCCGAACCCCCGCGAAAGACGGACTTGAAGCCAAAGACCTCGG CTACGCCTAAGGACGAGAGCGAAGAGGTCGAGGAAGACGAGGGCGACGACGACGATGAAGATCTTGGCGAGGATG AGTACGTTGGCGGCGACTTGGGAGATTTTGCGCACGGCTATTGACTCGAAGCAGATTCATCGTCGAGGCTATCAA GAAGCACATGGTAGACGCAGATGTACGTGTGCAGCCCGCTGTCGCCGACGCAACTGACTGTCCTGTAGGGCTCTC TCAAGTTTCTAGTCAAGTGGGAAGGCTATAACAAGAAGTCGGACATGACGTGGGAGCCAGAAGATAATCTTATGT AGGTTTCGGCCGTCGCCGGCGGTCCTGAGCGCGGCATCACTGACATGGTGGTGACGGCAGGGAGTCTGCGTCGGA CATTCTGGCCCAGTACTACAACCAGATTGGCGGTCGCGACAGCATCTTCGAAGAGTCGCAAGTGGCATCTCGCAG CAAGAAGCGCGGGCGCGCATCGACCGGGACGCCCTCGACGACGAAGCGACCGCGGAAGAACGGGCTTCACCCAGC CGACTCGACGCCGCCAGCGAGCGCCAGGAAGTGGAGCCCGCCGGCTGGGTCTTGGGAAGACGAGATTGAGTCCAT CGACGCGTGTCACGATGAGGGCAGCGGCAAGCTGGCCGTCTACCTGATCTGGAACAATGGGAAGAAGACGAAGCA CGACACGACGGTCGTCTACAAGAAGTGTCCGCAAAAGGTAAAGGCGACGTCGCGAGGGCTGAGGGATACGAGGCT GACGTTGAAGCAGATGCTCCAGTTCTACGAGCGGCACATCAAGGTCATCCGCGAAGAGAACCTTGCAGCGGGCAT GTAGATAGCGGAAGGGGACATTGGGGGAGGATTAAAGGATACCTAGGAGAGGGAGCGATTGGGATTTCTGCTCAG CAGATGCTTTATATGGGAAGGTCTGTCTCTCTTTTGGGGTTGAGGCTTACTGAGACGGGCTCGGTGTAAGATGGA GAGGACAGCAAGGCGAATTGGGATGCACCGTTAAAGCAGGCTCTGCTGAGAGAGATTGCGTCTTCTGTGTCTGTG TTCCATTTCGTCCCTATTGTCTTATTGTTACTCATGGATTGTGTGAATCCTGTTTGGACAAACATCCATGGTAGC CTCAGGCAGGTACAGGTAGGTAGGTACATTGGGTTACCATTCAATTCGAGTTTATCTTAACTAAGGCTCTTACTG CGGGGCAGCGATGGTGTTAAGATTTGCTATATGTAGGTGGTAGAGGAAGGTCGCCCAGCCCCCCTCCCCCGAAAT GGAAGCCCAGCCTTGCGCATTTCACCACCCAAGGGGCCGCTTCTCACGGGCCGCAGCGCCCTTTTTAGCGGGCAT GCAGCTGCTCCCCAGCACCAGGTGCACCAATGAAAGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAAAAAAGGC GGGTGGCGGGGCAACGGGAGGGCTTGTTGCTTGTTGGAGAGGGGGGATGGTGTATAAAAGCGCTGGCTGGCTGCG GACGGTAGGCAATGTAGTAGTTGTCTTTTACAGATTGGACGTTGGGTATTAATCTGCTGTCGACGTTGTGTTGCT TGTTGGTGTTTTACGCGTTGCTGTTGTTGGATCAGCTGCTGTCGTTGCTTCTTGTTGCTGGGTGCTGCTTCCGAC GATAATCTTGAACTGAACGAGTTTGTTGCGGCTTGCTCCTCGTCGACTCGACTCTTACGGACCTCTTCACATCAT CATCAGCGCCGCAACTCCGCTCATCAGCATCCACATCCAGCTCCAACCACCAGCTCCTCACTCCCACCCCCCCCC CCAATCAACACAACACATCACACCACCACCACCACCACCACCGAAATGGTGCAGCGAAACCACGTGGTAGCCATC ATCATCATCGTCATCTTCGTCATCCTCGCCCTCGTGGCCTTTGGCATCGCCAAGATGGTGACGACGGCGCGCAAA GACTTGACGGAGCATTCACTTTCGAGCGAGAGTAGTGAATCTTCGCAGGAGGATATCGTCGATGATGACTGA