Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01263
Gene name
Locationscaffold_01:4530098..4531487
Strand+
Gene length (bp)1389
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02628 COX15-CtaA Cytochrome oxidase assembly protein 8.2E-112 57 401

GO

GO Term Description Terminal node
GO:0006784 heme A biosynthetic process Yes
GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor Yes
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0006779 porphyrin-containing compound biosynthetic process No
GO:0003824 catalytic activity No
GO:0033013 tetrapyrrole metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:1901566 organonitrogen compound biosynthetic process No
GO:0016491 oxidoreductase activity No
GO:1901576 organic substance biosynthetic process No
GO:0009058 biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0008152 metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0044237 cellular metabolic process No
GO:0042168 heme metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0042440 pigment metabolic process No
GO:0008150 biological_process No
GO:0019438 aromatic compound biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0046160 heme a metabolic process No
GO:0046148 pigment biosynthetic process No
GO:0016651 oxidoreductase activity, acting on NAD(P)H No
GO:0006783 heme biosynthetic process No
GO:0003674 molecular_function No
GO:0006807 nitrogen compound metabolic process No
GO:0005575 cellular_component No
GO:0033014 tetrapyrrole biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0006778 porphyrin-containing compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 55 77 22
2 141 160 19
3 167 189 22
4 211 233 22
5 254 276 22
6 327 344 17
7 364 386 22
8 390 412 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01263
MSILAPSLRRLTIRLPPRTFICRQCRPAPPTNLVQPARWQSTAGRASFPRKTPKAVAYWLFGSAASVFGIVVFGG
LTRLTESGLSITEWRPVTGSLPPLSPEDWISEFDKYRASPEFKLLNPHMTLDEFKRIYLMEWTHRLWGRLIGLTF
ALPTVYLVVRRRVSPRMAVHLVGISALIGFQGFIGWWMVRSGLHDDLFAPGSHPRVSQYRLTAHLATAFVCYSWM
LLCGLSILRSHRLPVAASHPALGPFRRCSVALAALVFLTAMSGGLVAGLDAGLIYNEFPRMGLGLTPPRAELWDA
FYSRRHDRSDLWWRNMLENPSTVQMDHRILAVTTLCCVLALFAYSRTRSVAAVLPPGARRAANGLVYLVTLQATL
GISTLIYMVPIPLAAAHQAGSLALLTGALILAHRLHVPTSSVRILEQRLKKMQHGSSVAKT*
Coding >Ophcf2|01263
ATGTCCATCCTCGCCCCCAGCCTCCGCCGACTGACTATCCGGCTACCGCCCCGGACCTTCATCTGCCGCCAATGC
CGCCCCGCGCCTCCCACGAACCTCGTCCAACCCGCGAGATGGCAGAGCACAGCCGGCAGAGCGAGCTTCCCCCGG
AAGACGCCCAAGGCAGTGGCCTACTGGCTCTTCGGCAGCGCAGCCAGCGTCTTCGGAATCGTCGTCTTCGGTGGC
CTCACCCGTCTGACCGAGTCCGGGCTGAGCATCACCGAATGGCGGCCCGTAACCGGCTCCTTACCCCCCCTCTCC
CCGGAAGACTGGATCTCCGAGTTCGACAAGTACCGCGCCTCGCCCGAGTTCAAACTCCTCAATCCGCACATGACG
CTCGACGAATTCAAGCGCATTTACCTCATGGAGTGGACCCATCGTCTCTGGGGCCGCCTCATCGGCCTCACCTTC
GCTCTACCCACCGTCTATCTTGTTGTACGCCGCCGCGTGAGCCCTCGCATGGCCGTTCACCTCGTCGGCATCTCG
GCCCTCATCGGCTTTCAGGGCTTCATCGGCTGGTGGATGGTCCGCTCTGGTCTTCACGATGACCTCTTCGCTCCG
GGCTCCCATCCGCGAGTCTCGCAGTACCGGCTCACAGCCCATCTCGCCACGGCCTTCGTCTGCTACTCGTGGATG
CTCCTCTGCGGCCTCTCCATCTTACGCTCCCACCGCCTCCCCGTTGCCGCCTCCCATCCCGCCCTGGGACCTTTT
CGCCGCTGCTCCGTCGCCCTCGCTGCTCTCGTCTTCCTGACCGCCATGTCCGGCGGCCTGGTGGCGGGCCTCGAT
GCCGGCCTCATCTACAACGAGTTCCCCCGCATGGGTCTGGGCCTGACGCCGCCGCGCGCCGAGCTGTGGGACGCC
TTCTACTCCCGCCGCCACGACCGCTCCGATCTCTGGTGGCGCAACATGCTGGAGAACCCCAGCACCGTCCAGATG
GACCACCGTATTCTGGCCGTCACGACGCTGTGCTGCGTTCTCGCCTTGTTTGCCTACTCTCGCACCCGTTCCGTC
GCCGCCGTGCTGCCCCCCGGTGCCCGTCGTGCCGCCAACGGCCTCGTTTACCTCGTCACCTTGCAGGCTACCTTG
GGCATATCGACACTCATCTACATGGTACCGATCCCGCTCGCCGCGGCTCATCAGGCCGGCAGCCTCGCCCTCCTT
ACCGGAGCCCTGATTCTGGCTCACCGGCTGCATGTGCCGACTTCTTCCGTCCGCATCCTCGAGCAGCGGCTGAAG
AAAATGCAGCATGGGAGCTCAGTGGCTAAGACATAG
Transcript >Ophcf2|01263
ATGTCCATCCTCGCCCCCAGCCTCCGCCGACTGACTATCCGGCTACCGCCCCGGACCTTCATCTGCCGCCAATGC
CGCCCCGCGCCTCCCACGAACCTCGTCCAACCCGCGAGATGGCAGAGCACAGCCGGCAGAGCGAGCTTCCCCCGG
AAGACGCCCAAGGCAGTGGCCTACTGGCTCTTCGGCAGCGCAGCCAGCGTCTTCGGAATCGTCGTCTTCGGTGGC
CTCACCCGTCTGACCGAGTCCGGGCTGAGCATCACCGAATGGCGGCCCGTAACCGGCTCCTTACCCCCCCTCTCC
CCGGAAGACTGGATCTCCGAGTTCGACAAGTACCGCGCCTCGCCCGAGTTCAAACTCCTCAATCCGCACATGACG
CTCGACGAATTCAAGCGCATTTACCTCATGGAGTGGACCCATCGTCTCTGGGGCCGCCTCATCGGCCTCACCTTC
GCTCTACCCACCGTCTATCTTGTTGTACGCCGCCGCGTGAGCCCTCGCATGGCCGTTCACCTCGTCGGCATCTCG
GCCCTCATCGGCTTTCAGGGCTTCATCGGCTGGTGGATGGTCCGCTCTGGTCTTCACGATGACCTCTTCGCTCCG
GGCTCCCATCCGCGAGTCTCGCAGTACCGGCTCACAGCCCATCTCGCCACGGCCTTCGTCTGCTACTCGTGGATG
CTCCTCTGCGGCCTCTCCATCTTACGCTCCCACCGCCTCCCCGTTGCCGCCTCCCATCCCGCCCTGGGACCTTTT
CGCCGCTGCTCCGTCGCCCTCGCTGCTCTCGTCTTCCTGACCGCCATGTCCGGCGGCCTGGTGGCGGGCCTCGAT
GCCGGCCTCATCTACAACGAGTTCCCCCGCATGGGTCTGGGCCTGACGCCGCCGCGCGCCGAGCTGTGGGACGCC
TTCTACTCCCGCCGCCACGACCGCTCCGATCTCTGGTGGCGCAACATGCTGGAGAACCCCAGCACCGTCCAGATG
GACCACCGTATTCTGGCCGTCACGACGCTGTGCTGCGTTCTCGCCTTGTTTGCCTACTCTCGCACCCGTTCCGTC
GCCGCCGTGCTGCCCCCCGGTGCCCGTCGTGCCGCCAACGGCCTCGTTTACCTCGTCACCTTGCAGGCTACCTTG
GGCATATCGACACTCATCTACATGGTACCGATCCCGCTCGCCGCGGCTCATCAGGCCGGCAGCCTCGCCCTCCTT
ACCGGAGCCCTGATTCTGGCTCACCGGCTGCATGTGCCGACTTCTTCCGTCCGCATCCTCGAGCAGCGGCTGAAG
AAAATGCAGCATGGGAGCTCAGTGGCTAAGACATAG
Gene >Ophcf2|01263
ATGTCCATCCTCGCCCCCAGCCTCCGCCGACTGACTATCCGGCTACCGCCCCGGACCTTCATCTGCCGCCAATGC
CGCCCCGCGCCTCCCACGAACCTCGTCCAACCCGCGAGATGGCAGAGCACAGCCGGCAGAGCGAGCTTCCCCCGG
AAGACGCCCAAGGCAGTGGCCTACTGGCTCTTCGGCAGCGCAGCCAGCGTCTTCGGAATCGTCGTCTTCGGTGGC
CTCACCCGTCTGACCGAGTCCGGGTTCGATTCCCCCTCCCTCCCCTCCCTCCCCCCCCGAAACCTCCGGAAAACA
CCGGACGACTAACACGCCTCGCACAGGCTGAGCATCACCGAATGGCGGCCCGTAACCGGCTCCTTACCCCCCCTC
TCCCCGGAAGACTGGATCTCCGAGTTCGACAAGTACCGCGCCTCGCCCGAGTTCAAACTCCTCAATCCGCACATG
ACGCTCGACGAATTCAAGCGCATTTACCTCATGGAGTGGACCCATCGTCTCTGGGGCCGCCTCATCGGCCTCACC
TTCGCTCTACCCACCGTCTATCTTGTTGTACGCCGCCGCGTGAGCCCTCGCATGGCCGTTCACCTCGTCGGCATC
TCGGCCCTCATCGGCTTTCAGGGCTTCATCGGCTGGTGGATGGTCCGCTCTGGTCTTCACGATGACCTCTTCGCT
CCGGGCTCCCATCCGCGAGTCTCGCAGTACCGGCTCACAGCCCATCTCGCCACGGCCTTCGTCTGCTACTCGTGG
ATGCTCCTCTGCGGCCTCTCCATCTTACGCTCCCACCGCCTCCCCGTTGCCGCCTCCCATCCCGCCCTGGGACCT
TTTCGCCGCTGCTCCGTCGCCCTCGCTGCTCTCGTCTTCCTGACCGCCATGTCCGGCGGCCTGGTGGCGGGCCTC
GATGCCGGCCTCATCTACAACGAGTTCCCCCGCATGGGTCTGGGCCTGACGCCGCCGCGCGCCGAGCTGTGGGAC
GCCTTCTACTCCCGCCGCCACGACCGCTCCGATCTCTGGTGGCGCAACATGCTGGAGAACCCCAGCACCGTCCAG
ATGGACCACCGTATTCTGGCCGTCACGACGCTGTGCTGCGTTCTCGCCTTGTTTGCCTACTCTCGCACCCGTTCC
GTCGCCGCCGTGCTGCCCCCCGGTGCCCGTCGTGCCGCCAACGGCCTCGTTTACCTCGTCACCTTGCAGGCTACC
TTGGGCATATCGACACTCATCTACATGGTACCGATCCCGCTCGCCGCGGCTCATCAGGCCGGCAGCCTCGCCCTC
CTTACCGGAGCCCTGATTCTGGCTCACCGGCTGCATGTGCCGACTTCTTCCGTCCGCATCCTCGAGCAGCGGCTG
AAGAAAATGCAGCATGGGAGCTCAGTGGCTAAGACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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