Protein ID | Ophcf2|01258 |
Gene name | |
Location | scaffold_01:4516321..4518703 |
Strand | + |
Gene length (bp) | 2382 |
Transcript length (bp) | 1881 |
Coding sequence length (bp) | 1881 |
Protein length (aa) | 627 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00226 | DnaJ | DnaJ domain | 1.8E-20 | 18 | 81 |
PF10451 | Stn1 | Telomere regulation protein Stn1 | 2.8E-15 | 394 | 521 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 55 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01258 MSDTEDLVVGDEPPAVEPYEILGLERSATPEKIRSAYRKAALKNHPDKVSEDRKAEAHAKFQSIAFAYAVLSDPV RRKRFDATGSTAESIVDSDGFDWTDFYREQFQNAVSSEAIEKFSREYKGSDEEKDDLLAAYEKCKGDMDGVYESV MLSNITSDDARFRRIIDEAIDNGDVEAFTAYTKESKKKRAARLKAATAEEAEAEDYAKELGVHDELFGGKKKKKK AKSSEDGLAALILKRQQDRSANFLDQLTQKYVKKGTKGKKRELEEEPSEEAFKEAAGRLKKGSKGKRSNMVGWSR GGCALELALVILSDDPEWAKVTRPRPVVYPISVATSPPQPPTELVLDRPCAAMSIASQYPRYCFHLSPTFNVWCL FHAREIHRLDKYEEYEGEQFFFYGNLPIRWVRVVGVVVAIDDFDGRRVYTVDDSSGACIEALMMLQPPQGANSGK GPSEAVDVGSVVDVKGHLSLYRDEKQIKIDLIRRLRNTADEVALWERRAAFRRDVLDKPWVLSTTKVDRCRKEAN RSKAALHRRKSRRAAAVSTRGAGRRPEAHPGEGTRREVAAHVRDMILAGEMAGNNPEPNPEAPRRRSYHCLRNLI VPERRLGWSVCLPQLECRHGLTTSVP* |
Coding | >Ophcf2|01258 ATGTCGGACACCGAAGACTTGGTAGTCGGCGACGAGCCACCCGCGGTGGAACCGTACGAGATTCTCGGTCTCGAG CGTTCCGCAACGCCGGAGAAGATCAGAAGCGCATACAGAAAGGCGGCGCTCAAAAACCATCCGGACAAGGTGTCC GAGGACAGAAAGGCCGAGGCACACGCCAAGTTCCAGTCCATCGCGTTTGCATACGCCGTTCTCTCGGATCCCGTC CGGCGCAAGCGGTTTGATGCGACAGGCTCAACGGCGGAGTCGATCGTCGACTCAGATGGCTTTGACTGGACCGAC TTTTATCGCGAGCAGTTCCAGAATGCCGTCTCGAGCGAGGCCATCGAGAAGTTCTCCCGTGAATACAAGGGCTCT GACGAAGAAAAGGACGACCTGCTCGCCGCGTACGAGAAATGCAAGGGAGACATGGATGGCGTCTACGAATCAGTG ATGCTCAGCAATATTACTTCGGACGATGCCAGATTTCGCCGCATTATAGACGAGGCCATCGATAATGGCGACGTA GAAGCTTTCACCGCGTACACCAAGGAGAGCAAGAAGAAGCGTGCAGCACGCCTCAAGGCGGCGACGGCCGAGGAA GCCGAAGCGGAAGACTACGCCAAAGAGCTCGGCGTCCACGATGAGCTTTTCGGAGGCAAGAAGAAGAAGAAGAAG GCCAAAAGCTCAGAAGACGGTCTGGCGGCCTTGATCCTGAAAAGGCAGCAGGATCGATCGGCCAATTTCCTCGAT CAGCTGACCCAGAAGTATGTCAAGAAAGGAACCAAGGGCAAGAAGAGGGAGCTCGAGGAGGAGCCGTCGGAGGAG GCATTCAAAGAAGCGGCCGGCAGGCTGAAGAAGGGGTCCAAGGGGAAGAGGTCTAACATGGTCGGCTGGTCCCGT GGTGGTTGTGCCCTGGAGTTGGCTCTCGTCATTCTCTCCGACGATCCGGAGTGGGCCAAGGTCACGCGGCCGAGA CCCGTCGTTTATCCGATCTCGGTTGCAACCTCACCGCCGCAACCACCTACCGAACTCGTCCTTGACCGGCCATGT GCTGCCATGAGCATAGCTTCGCAGTATCCTCGTTACTGCTTCCATCTTTCGCCCACATTCAACGTCTGGTGTCTC TTTCACGCGCGCGAGATCCACCGCCTCGACAAGTATGAGGAATATGAAGGAGAGCAATTCTTCTTCTACGGAAAC TTGCCGATTCGATGGGTGCGCGTAGTGGGCGTCGTTGTTGCCATCGATGACTTTGACGGCCGACGCGTCTACACC GTCGATGACAGCAGCGGCGCCTGCATCGAGGCGCTGATGATGCTGCAACCACCACAAGGCGCCAACAGCGGGAAA GGGCCCAGCGAGGCTGTCGACGTCGGCTCTGTCGTTGACGTCAAGGGCCATTTGAGTCTCTACCGCGACGAGAAA CAGATCAAGATCGATCTCATCAGGCGCCTCCGCAACACCGCTGACGAGGTGGCTCTTTGGGAGAGGAGGGCCGCG TTCCGGCGCGACGTTCTCGACAAACCGTGGGTCCTCTCCACCACCAAAGTCGACCGTTGCCGTAAGGAGGCGAAT CGATCCAAAGCGGCCCTTCATCGCAGGAAGAGTCGCCGCGCTGCGGCCGTTTCGACGAGAGGCGCGGGCAGGCGG CCGGAGGCGCATCCAGGCGAAGGCACGCGACGCGAAGTGGCTGCTCATGTCCGAGACATGATCCTCGCCGGGGAG ATGGCAGGAAACAATCCGGAGCCGAATCCTGAAGCCCCCCGGCGCCGAAGCTATCATTGCTTGAGGAACCTCATC GTGCCCGAGCGGCGCCTTGGCTGGTCGGTTTGCCTGCCCCAACTGGAATGTCGACATGGCCTCACTACCAGTGTA CCTTGA |
Transcript | >Ophcf2|01258 ATGTCGGACACCGAAGACTTGGTAGTCGGCGACGAGCCACCCGCGGTGGAACCGTACGAGATTCTCGGTCTCGAG CGTTCCGCAACGCCGGAGAAGATCAGAAGCGCATACAGAAAGGCGGCGCTCAAAAACCATCCGGACAAGGTGTCC GAGGACAGAAAGGCCGAGGCACACGCCAAGTTCCAGTCCATCGCGTTTGCATACGCCGTTCTCTCGGATCCCGTC CGGCGCAAGCGGTTTGATGCGACAGGCTCAACGGCGGAGTCGATCGTCGACTCAGATGGCTTTGACTGGACCGAC TTTTATCGCGAGCAGTTCCAGAATGCCGTCTCGAGCGAGGCCATCGAGAAGTTCTCCCGTGAATACAAGGGCTCT GACGAAGAAAAGGACGACCTGCTCGCCGCGTACGAGAAATGCAAGGGAGACATGGATGGCGTCTACGAATCAGTG ATGCTCAGCAATATTACTTCGGACGATGCCAGATTTCGCCGCATTATAGACGAGGCCATCGATAATGGCGACGTA GAAGCTTTCACCGCGTACACCAAGGAGAGCAAGAAGAAGCGTGCAGCACGCCTCAAGGCGGCGACGGCCGAGGAA GCCGAAGCGGAAGACTACGCCAAAGAGCTCGGCGTCCACGATGAGCTTTTCGGAGGCAAGAAGAAGAAGAAGAAG GCCAAAAGCTCAGAAGACGGTCTGGCGGCCTTGATCCTGAAAAGGCAGCAGGATCGATCGGCCAATTTCCTCGAT CAGCTGACCCAGAAGTATGTCAAGAAAGGAACCAAGGGCAAGAAGAGGGAGCTCGAGGAGGAGCCGTCGGAGGAG GCATTCAAAGAAGCGGCCGGCAGGCTGAAGAAGGGGTCCAAGGGGAAGAGGTCTAACATGGTCGGCTGGTCCCGT GGTGGTTGTGCCCTGGAGTTGGCTCTCGTCATTCTCTCCGACGATCCGGAGTGGGCCAAGGTCACGCGGCCGAGA CCCGTCGTTTATCCGATCTCGGTTGCAACCTCACCGCCGCAACCACCTACCGAACTCGTCCTTGACCGGCCATGT GCTGCCATGAGCATAGCTTCGCAGTATCCTCGTTACTGCTTCCATCTTTCGCCCACATTCAACGTCTGGTGTCTC TTTCACGCGCGCGAGATCCACCGCCTCGACAAGTATGAGGAATATGAAGGAGAGCAATTCTTCTTCTACGGAAAC TTGCCGATTCGATGGGTGCGCGTAGTGGGCGTCGTTGTTGCCATCGATGACTTTGACGGCCGACGCGTCTACACC GTCGATGACAGCAGCGGCGCCTGCATCGAGGCGCTGATGATGCTGCAACCACCACAAGGCGCCAACAGCGGGAAA GGGCCCAGCGAGGCTGTCGACGTCGGCTCTGTCGTTGACGTCAAGGGCCATTTGAGTCTCTACCGCGACGAGAAA CAGATCAAGATCGATCTCATCAGGCGCCTCCGCAACACCGCTGACGAGGTGGCTCTTTGGGAGAGGAGGGCCGCG TTCCGGCGCGACGTTCTCGACAAACCGTGGGTCCTCTCCACCACCAAAGTCGACCGTTGCCGTAAGGAGGCGAAT CGATCCAAAGCGGCCCTTCATCGCAGGAAGAGTCGCCGCGCTGCGGCCGTTTCGACGAGAGGCGCGGGCAGGCGG CCGGAGGCGCATCCAGGCGAAGGCACGCGACGCGAAGTGGCTGCTCATGTCCGAGACATGATCCTCGCCGGGGAG ATGGCAGGAAACAATCCGGAGCCGAATCCTGAAGCCCCCCGGCGCCGAAGCTATCATTGCTTGAGGAACCTCATC GTGCCCGAGCGGCGCCTTGGCTGGTCGGTTTGCCTGCCCCAACTGGAATGTCGACATGGCCTCACTACCAGTGTA CCTTGA |
Gene | >Ophcf2|01258 ATGTCGGACACCGAAGACTTGGTAGTCGGCGACGAGCCACCCGCGGTGGAACCGTACGAGATTCTCGGTCTCGAG CGTTCCGCAACGCCGGAGAAGATCAGAAGCGCATACAGAAAGGCGGCGCTCAAAAACCATCCGGGTAAGTAATGG CGGCCGCAGCTAAGATTTGTCCTGGTATATCTGACCCTCACCGACGCAGACAAGGTGTCCGAGGACAGAAAGGCC GAGGCACACGCCAAGTTCCAGTCCATCGCGTTTGCATACGCCGTTCTCTCGGATCCCGTCCGGCGCAAGCGGTTT GATGCGACAGGCTCAACGGCGGAGTCGATCGTCGACTCAGATGGCTTTGACTGGACCGACTTTTATCGCGAGCAG TTCCAGAATGCCGTCTCGAGCGAGGCCATCGAGAAGTTCTCCCGTGAATACAAGGGCTCTGACGAAGAAAAGGAC GACCTGCTCGCCGCGTACGAGAAATGCAAGGGAGACATGGATGGCGTCTACGAATCAGTGATGCTCAGCAATATT ACTTCGGACGATGCCAGATTTCGCCGCATTATAGACGAGGCCATCGATAATGGCGACGTAGAAGCTTTCACCGCG TACACCAAGGAGAGCAAGAAGAAGCGTGCAGCACGCCTCAAGGCGGCGACGGCCGAGGAAGCCGAAGCGGAAGAC TACGCCAAAGAGCTCGGCGTCCACGATGAGCTTTTCGGAGGCAAGAAGAAGAAGAAGAAGGCCAAAAGCTCAGAA GACGGTCTGGCGGCCTTGATCCTGAAAAGGCAGCAGGATCGATCGGCCAATTTCCTCGATCAGCTGACCCAGAAG TATGTCAAGAAAGGAACCAAGGGCAAGAAGAGGGAGCTCGAGGAGGAGCCGTCGGAGGAGGCATTCAAAGAAGCG GCCGGCAGGCTGAAGAAGGGGTCCAAGGGGAAGAGGTCACGAAGCTGAGGCAGGCGGCCGCATGGGCGGGAGGAT TGGCGTTTCACGCGATTTCTCGGATACAATTCTCGGATACAATTCTCGGGCACTTGTGTCGCGGAATGCATCGGG TCGGGACGCAGGGTTCGGCGTCTTTTCTGTGAGCATCTGTAGGTCTAACATGGTCGGCTGGTCCCGTGGTGGTTG TGCCCTGGAGTTGGCTCTCGTCATTCTCTCCGACGATCCGGAGTGGGCCAAGGTCACGCGGCCGAGACCCGTCGT TTATCCGATCTCGGTTGCAACCTCACCGCCGCAACCACCTACCGAACTCGTCCTTGACCGGCCATGTGCTGCCAT GAGCATAGCTTCGCAGTATCCTCGTTACTGCTTCCATCTTTCGCCCACATTCAACGTCTGGTGTCTCTTTCACGC GCGCGAGATCCACCGCCTCGACAAGTATGAGGAATATGAAGGAGGTCAGTGTCGACCGCGTCACTTGCTTGGGCG TCTCTGACACGCGCCACCCCCCAGAGCAATTCTTCTTCTACGGAAACTTGCCGATTCGATGGGTGCGCGTAGTGG GCGTCGTTGTTGCCATCGATGACTTTGACGGCCGACGCGTCTACACCGTCGATGACAGCAGCGGCGCCTGCATCG AGGCGCTGATGATGCTGCAACCACCACAAGGCGCCAACAGCGGGAAAGGGCCCAGCGAGGCTGTCGACGTCGGCT CTGTCGTTGACGTCAAGGGCCATTTGAGTCTCTACCGCGACGAGAAACAGATCAAGATCGATCTCATCAGGCGCC TCCGCAACACCGCTGACGAGGTGGCTCTTTGGGAGAGGAGGGCCGCGTTCCGGCGCGACGTTCTCGACAAACCGT GGGTCCTCTCCACCACCAAAGTCGACCGTTGCCGTAAGGAGGCGAATCGATCCAAAGCGGCCCTTCATCGCAGGA AGAGTCGCCGCGCTGCGGCCGTTTCGACGAGAGGCGCGGGCAGGCGGCCGGAGGCGCATCCAGGCGAAGGCACGC GACGCGAAGTGGCTGCTCATGTCCGAGACATGATCCTCGCCGGGGAGATGGCAGGAAAGTACCATGCTTTGGGAC TTTGATTTGCGGTTCGGTTTGTGCTGGGATGTCGAGTAGCAATCGTGGGTCACGGACAAACGGGCGTCGACCGAG CTCGTGACGCGTCTCCGCCCACCTTTTTTACCTAATGTGCAGTCAGGGGCAAGAGACCAGATGACGAATTTGACA GCGGAGCCGAATCCTGAAGCCCCCCGGCGCCGAAGCTATCATTGCTTGAGGAACCTCATCGTGCCCGGCAGGTTG TCCCCCTTCTTTCTTACCTACCTAGGTACCTGTCATGTCGTCTAACCGAGGTAGGTAGAGCGGCGCCTTGGCTGG TCGGTTTGCCTGCCCCAACTGGAATGTCGACATGGCCTCACTACCAGTGTACCTTGA |