Protein ID | Ophcf2|01240 |
Gene name | |
Location | scaffold_01:4468825..4470945 |
Strand | + |
Gene length (bp) | 2120 |
Transcript length (bp) | 2037 |
Coding sequence length (bp) | 2037 |
Protein length (aa) | 679 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 1.4E-08 | 315 | 509 |
GO Term | Description | Terminal node |
---|---|---|
GO:0071704 | organic substance metabolic process | Yes |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0008152 | metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:0008150 | biological_process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0003674 | molecular_function | No |
GO:0016787 | hydrolase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 13 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 159 | 181 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Fungus | Fungus in pure culture | 16.09 | 8.18 | 23.99 |
Alive | In ants, during behavior modification | 5.66 | 2.15 | 9.18 |
Dead | In ants, recently dead | 19.06 | 9.14 | 28.98 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Alive | Fungus | 0.000238 | yes |
Alive | Dead | 0.000238 | yes |
Dead | Fungus | 0.484685 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|01240 MPRREPPARPAQGARRRQGQAAETSKKTRTKKKSPPTRSDESSGDRALSAAALAQLDRENARQSRKIPARKRPQR PLHHQPEVVPPPPPPPPPPPPAPKHRHDGHQHRVGKKQKTRRVVSGAAMEEGRGRRLRGDSSEDSFEKPDVHRRP RKKKSRKKLWILLACSVAIVIIIIIVAVVVSKNKAGGDGASSLDGKDRGSIPDKWRGTYLDPWSWQTTSDFNVTF TQDMVGGLPVMGLFTDWDDSSRANDQVPPLKESWGPYGKRPARGVNLGGWLSLEPFITPSLFRYDGVVDEWSLCR RLGPASAAKTLEDHYANFVTEDTFRAIAAAGLDHVRIPFSYWAVEVYDGDPYVFRISWRYLLRGIEWARRHGLRV NLDLHALPGSQNGWNHSGRSGAIGWLNGTDGALNGRRSMEIHDRLSRFFAQPRYRNIVTHYGLVNEPKMTFLAVD DVVAWTRRAHDTVRANGVTALVVFGDGFMGLEKWKGLMPRDMVLDVHQYLIFNENQIDFSHRRKVQYACSGWSQQ ADLSMDPARGHGPTVFAEWSQADTDCARFLTGVGWGNRWEGTYDSGDAATSVLEPRCPAGNRSCSCASANEPDAS RMSPAYRRFLQLFAEAQMHSFERGWGWWYWTWKTEAAPLWSYEAGLRAGILPRLAYHRDFNCDADVPDFAADGLP ETY* |
Coding | >Ophcf2|01240 ATGCCACGGAGAGAACCACCGGCCCGCCCCGCGCAAGGAGCCCGCCGTCGCCAAGGTCAAGCGGCGGAGACTTCG AAGAAGACTCGGACCAAGAAGAAGAGTCCGCCGACGAGGTCCGACGAGAGCAGCGGAGATAGGGCACTCTCCGCC GCCGCTCTCGCTCAGCTCGACCGGGAGAACGCACGACAGAGTCGCAAGATTCCCGCGCGGAAACGGCCGCAGCGG CCTTTGCATCATCAGCCCGAGGTTGTGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCCCCGGCTCCCAAGCAC CGCCATGACGGCCATCAGCATAGAGTCGGGAAGAAGCAGAAGACGAGGAGGGTTGTTAGCGGGGCGGCCATGGAG GAAGGGCGCGGGAGGCGTCTGCGAGGTGACAGTAGCGAGGACAGCTTCGAGAAGCCGGACGTTCATCGGCGACCG CGCAAGAAGAAATCGAGGAAGAAGCTGTGGATCTTGCTGGCCTGCAGCGTCGCCATCGTCATCATCATCATCATC GTGGCCGTCGTCGTCAGCAAGAACAAAGCAGGCGGCGATGGAGCGTCCAGCCTCGACGGCAAAGACCGGGGCTCG ATCCCCGATAAATGGCGCGGGACATATCTCGACCCGTGGTCCTGGCAGACGACATCCGACTTCAACGTGACGTTT ACCCAAGATATGGTAGGCGGCCTGCCCGTCATGGGCCTCTTCACAGACTGGGACGACTCGTCCCGGGCCAACGAC CAGGTGCCGCCGCTCAAGGAGTCATGGGGCCCGTACGGAAAGCGGCCGGCGCGGGGCGTCAATCTCGGGGGCTGG CTCTCGCTCGAGCCCTTTATCACGCCTTCGCTGTTCCGGTATGACGGAGTGGTGGACGAATGGAGTCTCTGTCGT CGGCTCGGGCCGGCTTCGGCGGCAAAGACGCTCGAGGATCATTATGCCAACTTCGTGACAGAGGATACGTTCCGG GCCATAGCGGCGGCGGGACTGGATCACGTCCGGATCCCCTTTTCGTACTGGGCCGTCGAGGTCTATGACGGGGAC CCGTACGTCTTCCGCATCTCATGGAGATATCTTCTTCGCGGCATCGAGTGGGCGAGACGCCATGGCCTCCGCGTC AACCTTGATCTTCACGCGCTGCCTGGTAGCCAGAATGGCTGGAACCACAGCGGTCGATCCGGGGCCATCGGCTGG CTCAACGGCACCGACGGCGCTCTCAACGGCCGGCGCTCGATGGAGATACACGATCGGCTATCACGATTCTTCGCT CAGCCGCGTTATCGTAACATCGTGACGCACTATGGGCTCGTCAACGAACCAAAGATGACTTTCTTGGCCGTCGAT GATGTCGTCGCCTGGACGAGACGCGCTCACGATACGGTCCGCGCCAACGGAGTCACCGCCCTCGTCGTCTTTGGC GATGGCTTCATGGGCCTCGAGAAGTGGAAGGGTCTCATGCCGCGAGACATGGTGCTCGACGTCCATCAGTACCTC ATCTTCAACGAGAACCAGATCGACTTTTCCCACCGTCGCAAGGTCCAGTACGCCTGCAGCGGATGGTCCCAGCAG GCCGACCTCAGTATGGATCCGGCCCGGGGTCACGGCCCTACCGTCTTCGCCGAATGGTCTCAGGCCGACACCGAC TGCGCCCGCTTCCTCACCGGCGTCGGCTGGGGTAACCGCTGGGAGGGCACCTATGACTCGGGCGATGCCGCCACC TCGGTTCTCGAGCCTCGCTGTCCGGCCGGGAACCGGTCCTGCTCGTGCGCGTCTGCCAACGAGCCCGACGCGTCC CGCATGAGTCCGGCCTACCGCCGCTTTCTGCAGCTCTTCGCCGAGGCCCAGATGCATAGCTTCGAGCGCGGATGG GGCTGGTGGTACTGGACCTGGAAGACCGAGGCCGCACCGTTGTGGAGCTACGAAGCCGGTCTCCGCGCCGGCATC TTGCCCCGGCTGGCCTATCATCGCGATTTCAACTGTGACGCCGACGTTCCGGACTTTGCTGCAGATGGCTTGCCG GAGACGTACTGA |
Transcript | >Ophcf2|01240 ATGCCACGGAGAGAACCACCGGCCCGCCCCGCGCAAGGAGCCCGCCGTCGCCAAGGTCAAGCGGCGGAGACTTCG AAGAAGACTCGGACCAAGAAGAAGAGTCCGCCGACGAGGTCCGACGAGAGCAGCGGAGATAGGGCACTCTCCGCC GCCGCTCTCGCTCAGCTCGACCGGGAGAACGCACGACAGAGTCGCAAGATTCCCGCGCGGAAACGGCCGCAGCGG CCTTTGCATCATCAGCCCGAGGTTGTGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCCCCGGCTCCCAAGCAC CGCCATGACGGCCATCAGCATAGAGTCGGGAAGAAGCAGAAGACGAGGAGGGTTGTTAGCGGGGCGGCCATGGAG GAAGGGCGCGGGAGGCGTCTGCGAGGTGACAGTAGCGAGGACAGCTTCGAGAAGCCGGACGTTCATCGGCGACCG CGCAAGAAGAAATCGAGGAAGAAGCTGTGGATCTTGCTGGCCTGCAGCGTCGCCATCGTCATCATCATCATCATC GTGGCCGTCGTCGTCAGCAAGAACAAAGCAGGCGGCGATGGAGCGTCCAGCCTCGACGGCAAAGACCGGGGCTCG ATCCCCGATAAATGGCGCGGGACATATCTCGACCCGTGGTCCTGGCAGACGACATCCGACTTCAACGTGACGTTT ACCCAAGATATGGTAGGCGGCCTGCCCGTCATGGGCCTCTTCACAGACTGGGACGACTCGTCCCGGGCCAACGAC CAGGTGCCGCCGCTCAAGGAGTCATGGGGCCCGTACGGAAAGCGGCCGGCGCGGGGCGTCAATCTCGGGGGCTGG CTCTCGCTCGAGCCCTTTATCACGCCTTCGCTGTTCCGGTATGACGGAGTGGTGGACGAATGGAGTCTCTGTCGT CGGCTCGGGCCGGCTTCGGCGGCAAAGACGCTCGAGGATCATTATGCCAACTTCGTGACAGAGGATACGTTCCGG GCCATAGCGGCGGCGGGACTGGATCACGTCCGGATCCCCTTTTCGTACTGGGCCGTCGAGGTCTATGACGGGGAC CCGTACGTCTTCCGCATCTCATGGAGATATCTTCTTCGCGGCATCGAGTGGGCGAGACGCCATGGCCTCCGCGTC AACCTTGATCTTCACGCGCTGCCTGGTAGCCAGAATGGCTGGAACCACAGCGGTCGATCCGGGGCCATCGGCTGG CTCAACGGCACCGACGGCGCTCTCAACGGCCGGCGCTCGATGGAGATACACGATCGGCTATCACGATTCTTCGCT CAGCCGCGTTATCGTAACATCGTGACGCACTATGGGCTCGTCAACGAACCAAAGATGACTTTCTTGGCCGTCGAT GATGTCGTCGCCTGGACGAGACGCGCTCACGATACGGTCCGCGCCAACGGAGTCACCGCCCTCGTCGTCTTTGGC GATGGCTTCATGGGCCTCGAGAAGTGGAAGGGTCTCATGCCGCGAGACATGGTGCTCGACGTCCATCAGTACCTC ATCTTCAACGAGAACCAGATCGACTTTTCCCACCGTCGCAAGGTCCAGTACGCCTGCAGCGGATGGTCCCAGCAG GCCGACCTCAGTATGGATCCGGCCCGGGGTCACGGCCCTACCGTCTTCGCCGAATGGTCTCAGGCCGACACCGAC TGCGCCCGCTTCCTCACCGGCGTCGGCTGGGGTAACCGCTGGGAGGGCACCTATGACTCGGGCGATGCCGCCACC TCGGTTCTCGAGCCTCGCTGTCCGGCCGGGAACCGGTCCTGCTCGTGCGCGTCTGCCAACGAGCCCGACGCGTCC CGCATGAGTCCGGCCTACCGCCGCTTTCTGCAGCTCTTCGCCGAGGCCCAGATGCATAGCTTCGAGCGCGGATGG GGCTGGTGGTACTGGACCTGGAAGACCGAGGCCGCACCGTTGTGGAGCTACGAAGCCGGTCTCCGCGCCGGCATC TTGCCCCGGCTGGCCTATCATCGCGATTTCAACTGTGACGCCGACGTTCCGGACTTTGCTGCAGATGGCTTGCCG GAGACGTACTGA |
Gene | >Ophcf2|01240 ATGCCACGGAGAGAACCACCGGCCCGCCCCGCGCAAGGAGCCCGCCGTCGCCAAGGTCAAGCGGCGGAGACTTCG AAGAAGACTCGGACCAAGAAGAAGAGTCCGCCGACGAGGTCCGACGAGAGCAGCGGAGATAGGGCACTCTCCGCC GCCGCTCTCGCTCAGCTCGACCGGGAGAACGCACGACAGAGTCGCAAGATTCCCGCGCGGAAACGGCCGCAGCGG CCTTTGCATCATCAGCCCGAGGTTGTGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCCCCGGCTCCCAAGCAC CGCCATGACGGCCATCAGCATAGAGTCGGGAAGAAGCAGAAGACGAGGAGGGTTGTTAGCGGGGCGGCCATGGAG GAAGGGCGCGGGAGGCGTCTGCGAGGTGACAGTAGCGAGGACAGCTTCGAGAAGCCGGACGTTCATCGGCGACCG CGCAAGAAGAAATCGAGGAAGAAGCTGTGTAAGTGATGACTACTGGGAACAATACGTTGATCTCGAGTTTGTTCC CTCTGGGGCTAACCATCATCTCCGGCTTCGAATCAGGGATCTTGCTGGCCTGCAGCGTCGCCATCGTCATCATCA TCATCATCGTGGCCGTCGTCGTCAGCAAGAACAAAGCAGGCGGCGATGGAGCGTCCAGCCTCGACGGCAAAGACC GGGGCTCGATCCCCGATAAATGGCGCGGGACATATCTCGACCCGTGGTCCTGGCAGACGACATCCGACTTCAACG TGACGTTTACCCAAGATATGGTAGGCGGCCTGCCCGTCATGGGCCTCTTCACAGACTGGGACGACTCGTCCCGGG CCAACGACCAGGTGCCGCCGCTCAAGGAGTCATGGGGCCCGTACGGAAAGCGGCCGGCGCGGGGCGTCAATCTCG GGGGCTGGCTCTCGCTCGAGCCCTTTATCACGCCTTCGCTGTTCCGGTATGACGGAGTGGTGGACGAATGGAGTC TCTGTCGTCGGCTCGGGCCGGCTTCGGCGGCAAAGACGCTCGAGGATCATTATGCCAACTTCGTGACAGAGGATA CGTTCCGGGCCATAGCGGCGGCGGGACTGGATCACGTCCGGATCCCCTTTTCGTACTGGGCCGTCGAGGTCTATG ACGGGGACCCGTACGTCTTCCGCATCTCATGGAGATATCTTCTTCGCGGCATCGAGTGGGCGAGACGCCATGGCC TCCGCGTCAACCTTGATCTTCACGCGCTGCCTGGTAGCCAGAATGGCTGGAACCACAGCGGTCGATCCGGGGCCA TCGGCTGGCTCAACGGCACCGACGGCGCTCTCAACGGCCGGCGCTCGATGGAGATACACGATCGGCTATCACGAT TCTTCGCTCAGCCGCGTTATCGTAACATCGTGACGCACTATGGGCTCGTCAACGAACCAAAGATGACTTTCTTGG CCGTCGATGATGTCGTCGCCTGGACGAGACGCGCTCACGATACGGTCCGCGCCAACGGAGTCACCGCCCTCGTCG TCTTTGGCGATGGCTTCATGGGCCTCGAGAAGTGGAAGGGTCTCATGCCGCGAGACATGGTGCTCGACGTCCATC AGTACCTCATCTTCAACGAGAACCAGATCGACTTTTCCCACCGTCGCAAGGTCCAGTACGCCTGCAGCGGATGGT CCCAGCAGGCCGACCTCAGTATGGATCCGGCCCGGGGTCACGGCCCTACCGTCTTCGCCGAATGGTCTCAGGCCG ACACCGACTGCGCCCGCTTCCTCACCGGCGTCGGCTGGGGTAACCGCTGGGAGGGCACCTATGACTCGGGCGATG CCGCCACCTCGGTTCTCGAGCCTCGCTGTCCGGCCGGGAACCGGTCCTGCTCGTGCGCGTCTGCCAACGAGCCCG ACGCGTCCCGCATGAGTCCGGCCTACCGCCGCTTTCTGCAGCTCTTCGCCGAGGCCCAGATGCATAGCTTCGAGC GCGGATGGGGCTGGTGGTACTGGACCTGGAAGACCGAGGCCGCACCGTTGTGGAGCTACGAAGCCGGTCTCCGCG CCGGCATCTTGCCCCGGCTGGCCTATCATCGCGATTTCAACTGTGACGCCGACGTTCCGGACTTTGCTGCAGATG GCTTGCCGGAGACGTACTGA |