Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|01234
Gene name
Location	scaffold_01:4452918..4453729
Strand	-
Gene length (bp)	811
Transcript length (bp)	615
Coding sequence length (bp)	615
Protein length (aa)	205

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04191	PEMT	Phospholipid methyltransferase	6.8E-32	89	189

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 32	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	12	30	18
2	50	69	19
3	89	111	22
4	146	168	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|01234 MAPLIDFDKQSLLVSLCSITFNPLFWNIVARQEYHNKLLTKLFGGQSRRACYALALTIFSLGLVRDWLYKRAIQE QPSHALLLTPASRLAGISLVLAGNVLVLSSTWALGITGTFLGDYFGILMDDMVTGFPFNVCGAPMYWGSTMSFLG TALLLGKPAGVFITAWVYMMYCAALRYEDPFTSAIYAKRERERAAMGGVAKKHM*
Coding	>Ophcf2\|01234 ATGGCGCCTCTTATCGACTTTGACAAGCAGAGCTTGCTGGTCTCCCTCTGCTCCATCACCTTCAACCCGCTGTTC TGGAACATCGTCGCCCGCCAAGAATACCACAACAAGCTGCTCACCAAGCTCTTCGGCGGCCAGTCCCGCCGCGCG TGCTACGCCCTCGCCTTGACCATCTTCTCCCTCGGCCTGGTACGCGACTGGCTCTACAAGCGGGCAATTCAAGAG CAGCCCTCTCACGCGCTGCTGCTAACGCCGGCGTCGCGCCTCGCCGGCATCTCCCTTGTGCTCGCCGGCAACGTC CTCGTCTTGTCGTCTACGTGGGCGCTCGGCATCACGGGCACCTTCTTGGGCGACTACTTCGGTATCCTGATGGAC GACATGGTGACGGGCTTTCCCTTCAACGTCTGCGGCGCTCCCATGTACTGGGGTTCTACCATGAGTTTCCTCGGC ACTGCACTGCTGTTGGGGAAGCCCGCCGGTGTCTTCATCACTGCTTGGGTCTACATGATGTACTGCGCCGCCTTA CGCTACGAGGACCCCTTCACCTCGGCCATTTACGCCAAGCGCGAACGAGAAAGGGCTGCCATGGGCGGTGTCGCC AAGAAGCACATGTGA
Transcript	>Ophcf2\|01234 ATGGCGCCTCTTATCGACTTTGACAAGCAGAGCTTGCTGGTCTCCCTCTGCTCCATCACCTTCAACCCGCTGTTC TGGAACATCGTCGCCCGCCAAGAATACCACAACAAGCTGCTCACCAAGCTCTTCGGCGGCCAGTCCCGCCGCGCG TGCTACGCCCTCGCCTTGACCATCTTCTCCCTCGGCCTGGTACGCGACTGGCTCTACAAGCGGGCAATTCAAGAG CAGCCCTCTCACGCGCTGCTGCTAACGCCGGCGTCGCGCCTCGCCGGCATCTCCCTTGTGCTCGCCGGCAACGTC CTCGTCTTGTCGTCTACGTGGGCGCTCGGCATCACGGGCACCTTCTTGGGCGACTACTTCGGTATCCTGATGGAC GACATGGTGACGGGCTTTCCCTTCAACGTCTGCGGCGCTCCCATGTACTGGGGTTCTACCATGAGTTTCCTCGGC ACTGCACTGCTGTTGGGGAAGCCCGCCGGTGTCTTCATCACTGCTTGGGTCTACATGATGTACTGCGCCGCCTTA CGCTACGAGGACCCCTTCACCTCGGCCATTTACGCCAAGCGCGAACGAGAAAGGGCTGCCATGGGCGGTGTCGCC AAGAAGCACATGTGA
Gene	>Ophcf2\|01234 ATGGCGCCTCTTATCGACTTTGACAAGCAGAGCTTGCTGGGTGGGCGTGCCTTGGATCGATCCATTCCCCGATTC CCCAATCTGATAGTCAACTCGTCTTCAGTCTCCCTCTGCTCCATCACCTTCAACCCGCTGTTCTGGAAGTAAGTA AGGCTTTCAAGCCTCGACCTTCACAGGCAGCTGACCGACCCTCACCCACCCTCACAGCATCGTCGCCCGCCAAGG TCCGTCCCGACCCCGACTCACAAGATAGCCACAGAAGCGCAACAGCTGGCTGAAACGTCCAGCAACAGAATACCA CAACAAGCTGCTCACCAAGCTCTTCGGCGGCCAGTCCCGCCGCGCGTGCTACGCCCTCGCCTTGACCATCTTCTC CCTCGGCCTGGTACGCGACTGGCTCTACAAGCGGGCAATTCAAGAGCAGCCCTCTCACGCGCTGCTGCTAACGCC GGCGTCGCGCCTCGCCGGCATCTCCCTTGTGCTCGCCGGCAACGTCCTCGTCTTGTCGTCTACGTGGGCGCTCGG CATCACGGGCACCTTCTTGGGCGACTACTTCGGTATCCTGATGGACGACATGGTGACGGGCTTTCCCTTCAACGT CTGCGGCGCTCCCATGTACTGGGGTTCTACCATGAGTTTCCTCGGCACTGCACTGCTGTTGGGGAAGCCCGCCGG TGTCTTCATCACTGCTTGGGTCTACATGATGTACTGCGCCGCCTTACGCTACGAGGACCCCTTCACCTCGGCCAT TTACGCCAAGCGCGAACGAGAAAGGGCTGCCATGGGCGGTGTCGCCAAGAAGCACATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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