Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01221
Gene name
Locationscaffold_01:4413050..4414235
Strand+
Gene length (bp)1185
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01221
MPLHAVILVLILHSLPTAASDKSLPTAVGAIFAAYAISLVLVALTLLALANKRREHLRAHLDLDPSVFITTQPDH
DPYQTSASPARSSTAVRNFSYPSPVRHDFPSSPIHPPEMVSQQQLDDMYRHAMEHEDARLNGQHFMPSPTQLKSK
PNHLTLDAKPQSKTQTFLNAIRTPRKKALKGVNISSPIMSPLPSPHASHTSRQYSPPTPSSYAPSPAAARGPPPT
TRHRMPLTPEISPRTIPSIEEHLDSYLGSDGQQSQQRRTALPLVGLPRSPKPGSCFPPVSSAPKLGSVRRPSAVR
EGGLLPLRAYEPERLGTNSSTTIQTILERKVPEAPVTGRSPVTAGAVPYSPYQPYTPCVPMTPSLVTKEDRKRMK
KMMPKTPTTEMVKKTDEVW*
Coding >Ophcf2|01221
ATGCCGTTGCATGCCGTCATCCTCGTCCTCATCCTTCATAGCCTGCCGACAGCCGCCTCGGACAAAAGCTTGCCC
ACTGCTGTAGGCGCCATCTTCGCTGCCTACGCCATCTCCCTCGTCCTCGTCGCCCTCACCCTCCTGGCCCTGGCC
AACAAGCGACGCGAGCATCTCCGCGCCCATCTCGACCTCGATCCCTCCGTCTTTATCACCACCCAGCCCGACCAC
GACCCCTATCAGACCTCGGCTAGCCCTGCCCGGAGCAGCACAGCCGTCCGCAACTTTTCCTATCCTTCACCCGTC
AGACACGACTTTCCCTCCTCGCCCATTCATCCGCCCGAGATGGTCTCTCAGCAGCAGCTCGACGACATGTACCGC
CATGCCATGGAGCACGAAGACGCCAGGCTCAACGGCCAGCACTTTATGCCGTCTCCCACCCAGCTCAAGTCAAAG
CCCAACCACCTGACCCTCGACGCGAAGCCCCAATCCAAGACCCAGACCTTCCTCAACGCCATCCGCACGCCCAGG
AAGAAGGCGCTCAAGGGCGTCAACATCTCCTCTCCCATCATGTCGCCCCTCCCCTCGCCTCATGCCTCCCATACA
TCTCGCCAGTACAGCCCTCCCACGCCCAGTAGTTACGCGCCCTCGCCCGCCGCCGCTCGTGGCCCGCCACCTACC
ACTCGCCATCGGATGCCCCTGACTCCCGAAATATCTCCTCGCACCATCCCCAGCATCGAAGAGCATCTCGATTCC
TATCTCGGCTCGGATGGACAGCAATCTCAGCAGCGTCGGACCGCTCTTCCTCTCGTCGGACTTCCGCGATCGCCC
AAGCCTGGCAGCTGCTTCCCCCCGGTGTCCTCGGCGCCTAAACTCGGCAGCGTGCGGCGGCCCAGTGCGGTGCGG
GAGGGCGGACTGCTGCCGCTGCGGGCCTATGAGCCGGAGAGGCTGGGTACGAATTCGTCGACTACCATCCAGACG
ATCCTGGAGAGAAAAGTACCTGAGGCTCCGGTGACGGGGCGGAGTCCGGTGACGGCCGGAGCCGTTCCGTACTCT
CCTTACCAGCCTTATACGCCCTGTGTACCCATGACGCCTTCTCTGGTCACCAAGGAGGACAGGAAGCGGATGAAG
AAGATGATGCCCAAGACGCCTACCACGGAGATGGTTAAGAAGACGGATGAAGTTTGGTGA
Transcript >Ophcf2|01221
ATGCCGTTGCATGCCGTCATCCTCGTCCTCATCCTTCATAGCCTGCCGACAGCCGCCTCGGACAAAAGCTTGCCC
ACTGCTGTAGGCGCCATCTTCGCTGCCTACGCCATCTCCCTCGTCCTCGTCGCCCTCACCCTCCTGGCCCTGGCC
AACAAGCGACGCGAGCATCTCCGCGCCCATCTCGACCTCGATCCCTCCGTCTTTATCACCACCCAGCCCGACCAC
GACCCCTATCAGACCTCGGCTAGCCCTGCCCGGAGCAGCACAGCCGTCCGCAACTTTTCCTATCCTTCACCCGTC
AGACACGACTTTCCCTCCTCGCCCATTCATCCGCCCGAGATGGTCTCTCAGCAGCAGCTCGACGACATGTACCGC
CATGCCATGGAGCACGAAGACGCCAGGCTCAACGGCCAGCACTTTATGCCGTCTCCCACCCAGCTCAAGTCAAAG
CCCAACCACCTGACCCTCGACGCGAAGCCCCAATCCAAGACCCAGACCTTCCTCAACGCCATCCGCACGCCCAGG
AAGAAGGCGCTCAAGGGCGTCAACATCTCCTCTCCCATCATGTCGCCCCTCCCCTCGCCTCATGCCTCCCATACA
TCTCGCCAGTACAGCCCTCCCACGCCCAGTAGTTACGCGCCCTCGCCCGCCGCCGCTCGTGGCCCGCCACCTACC
ACTCGCCATCGGATGCCCCTGACTCCCGAAATATCTCCTCGCACCATCCCCAGCATCGAAGAGCATCTCGATTCC
TATCTCGGCTCGGATGGACAGCAATCTCAGCAGCGTCGGACCGCTCTTCCTCTCGTCGGACTTCCGCGATCGCCC
AAGCCTGGCAGCTGCTTCCCCCCGGTGTCCTCGGCGCCTAAACTCGGCAGCGTGCGGCGGCCCAGTGCGGTGCGG
GAGGGCGGACTGCTGCCGCTGCGGGCCTATGAGCCGGAGAGGCTGGGTACGAATTCGTCGACTACCATCCAGACG
ATCCTGGAGAGAAAAGTACCTGAGGCTCCGGTGACGGGGCGGAGTCCGGTGACGGCCGGAGCCGTTCCGTACTCT
CCTTACCAGCCTTATACGCCCTGTGTACCCATGACGCCTTCTCTGGTCACCAAGGAGGACAGGAAGCGGATGAAG
AAGATGATGCCCAAGACGCCTACCACGGAGATGGTTAAGAAGACGGATGAAGTTTGGTGA
Gene >Ophcf2|01221
ATGCCGTTGCATGCCGTCATCCTCGTCCTCATCCTTCATAGCCTGCCGACAGCCGCCTCGGACAAAAGCTTGCCC
ACTGCTGTAGGCGCCATCTTCGCTGCCTACGCCATCTCCCTCGTCCTCGTCGCCCTCACCCTCCTGGCCCTGGCC
AACAAGCGACGCGAGCATCTCCGCGCCCATCTCGACCTCGATCCCTCCGTCTTTATCACCACCCAGCCCGACCAC
GACCCCTATCAGACCTCGGCTAGCCCTGCCCGGAGCAGCACAGCCGTCCGCAACTTTTCCTATCCTTCACCCGTC
AGACACGACTTTCCCTCCTCGCCCATTCATCCGCCCGAGATGGTCTCTCAGCAGCAGCTCGACGACATGTACCGC
CATGCCATGGAGCACGAAGACGCCAGGCTCAACGGCCAGCACTTTATGCCGTCTCCCACCCAGCTCAAGTCAAAG
CCCAACCACCTGACCCTCGACGCGAAGCCCCAATCCAAGACCCAGACCTTCCTCAACGCCATCCGCACGCCCAGG
AAGAAGGCGCTCAAGGGCGTCAACATCTCCTCTCCCATCATGTCGCCCCTCCCCTCGCCTCATGCCTCCCATACA
TCTCGCCAGTACAGCCCTCCCACGCCCAGTAGTTACGCGCCCTCGCCCGCCGCCGCTCGTGGCCCGCCACCTACC
ACTCGCCATCGGATGCCCCTGACTCCCGAAATATCTCCTCGCACCATCCCCAGCATCGAAGAGCATCTCGATTCC
TATCTCGGCTCGGATGGACAGCAATCTCAGCAGCGTCGGACCGCTCTTCCTCTCGTCGGACTTCCGCGATCGCCC
AAGCCTGGCAGCTGCTTCCCCCCGGTGTCCTCGGCGCCTAAACTCGGCAGCGTGCGGCGGCCCAGTGCGGTGCGG
GAGGGCGGACTGCTGCCGCTGCGGGCCTATGAGCCGGAGAGGCTGGGTACGAATTCGTCGACTACCATCCAGACG
ATCCTGGAGAGAAAAGTACCTGAGGCTCCGGTGACGGGGCGGAGTCCGGTGACGGCCGGAGCCGTTCCGTACTCT
CCTTACCAGCCTTATACGCCCTGTGTACCCATGACGCCTTCTCTGGTCACCAAGGAGGACAGGAAGCGGATGAAG
AAGATGATGCCCAAGACGCCTACCACGGAGATGGTTAAGAAGACGGATGAAGTTTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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