Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01187
Gene name
Locationscaffold_01:4314284..4315003
Strand+
Gene length (bp)719
Transcript length (bp)591
Coding sequence length (bp)591
Protein length (aa) 197

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13426 PAS_9 PAS domain 2.5E-12 90 184
PF00989 PAS PAS fold 6.3E-05 87 157

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0050789 regulation of biological process No
GO:0050794 regulation of cellular process No
GO:0065007 biological regulation No
GO:0080090 regulation of primary metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0019222 regulation of metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear export signal 0.5686 0.6521 0.0357 0.0483 0.2118 0.0067 0.2637 0.0335 0.0629 0.0117

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2591
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6574
Ophiocordyceps australis map64 (Brazil) OphauB2|7075
Ophiocordyceps camponoti-floridani Ophcf2|01187 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|3575
Ophiocordyceps kimflemingae Ophio5|6595
Ophiocordyceps subramaniannii Hirsu2|390

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01187
MASEGPQPPPLNNWETRALDYRFSPAAPVDVAAVEASWCQPRRDPLIFPGLYSASGFDLMNLLLRIISRPSPQIE
LGAVDCSVALVVCDLDLPDAPIVYASDSFCDMTGYSTAEVLGRNCRFLQSHGHNRSRMPVATSTKVMAQQISSAV
EAGREIQVTLPNYKKNGQLFNNFLSIIPVERQAGHRYAVGFQVQVD*
Coding >Ophcf2|01187
ATGGCTTCTGAAGGGCCGCAGCCGCCGCCGTTGAATAACTGGGAGACTAGGGCTTTGGATTATCGCTTTTCGCCT
GCTGCTCCGGTTGATGTTGCTGCTGTCGAGGCTTCGTGGTGTCAGCCTCGTCGGGATCCGTTGATATTCCCGGGT
TTGTACTCGGCCAGTGGCTTTGACCTGATGAATCTGCTGTTGCGCATCATCAGCCGTCCTAGTCCGCAGATCGAA
CTCGGAGCCGTCGACTGCTCCGTCGCCCTCGTCGTCTGCGATCTTGACCTTCCGGACGCGCCCATCGTCTACGCT
TCCGACTCCTTCTGTGACATGACCGGTTACTCCACGGCCGAAGTCTTGGGCCGTAACTGTCGCTTCCTGCAGTCT
CATGGTCATAACCGGTCCCGGATGCCTGTCGCTACCTCTACCAAGGTCATGGCTCAGCAGATCAGTAGTGCCGTC
GAGGCCGGTCGTGAGATTCAGGTCACGCTGCCCAACTACAAGAAGAACGGGCAGCTATTCAATAACTTCCTGAGC
ATCATCCCCGTCGAGAGACAAGCCGGCCATCGCTACGCCGTCGGATTCCAAGTCCAAGTCGATTAA
Transcript >Ophcf2|01187
ATGGCTTCTGAAGGGCCGCAGCCGCCGCCGTTGAATAACTGGGAGACTAGGGCTTTGGATTATCGCTTTTCGCCT
GCTGCTCCGGTTGATGTTGCTGCTGTCGAGGCTTCGTGGTGTCAGCCTCGTCGGGATCCGTTGATATTCCCGGGT
TTGTACTCGGCCAGTGGCTTTGACCTGATGAATCTGCTGTTGCGCATCATCAGCCGTCCTAGTCCGCAGATCGAA
CTCGGAGCCGTCGACTGCTCCGTCGCCCTCGTCGTCTGCGATCTTGACCTTCCGGACGCGCCCATCGTCTACGCT
TCCGACTCCTTCTGTGACATGACCGGTTACTCCACGGCCGAAGTCTTGGGCCGTAACTGTCGCTTCCTGCAGTCT
CATGGTCATAACCGGTCCCGGATGCCTGTCGCTACCTCTACCAAGGTCATGGCTCAGCAGATCAGTAGTGCCGTC
GAGGCCGGTCGTGAGATTCAGGTCACGCTGCCCAACTACAAGAAGAACGGGCAGCTATTCAATAACTTCCTGAGC
ATCATCCCCGTCGAGAGACAAGCCGGCCATCGCTACGCCGTCGGATTCCAAGTCCAAGTCGATTAA
Gene >Ophcf2|01187
ATGGCTTCTGAAGGGCCGCAGCCGCCGCCGTTGAATAACTGGGAGACTAGGGCTTTGGATGTGAGTGTCTGATGA
TGTTGGCTGTGTGTTGGATGGGGAGTGTCAGTACTGATGAGGCTTCTCTGCAGTATCGCTTTTCGCCTGCTGCTC
CGGTTGATGTTGCTGCTGTCGAGGCTTCGTGGTGTCAGCCTCGTCGGGATCCGTTGATATTCCCGGGTTTGTACT
CGGCCAGTGGCTTTGACCTGATGAATCTGCTGGTAGGTTACGTCTGCTACCCCCCCCCCCCCCCGTCTTTGATAC
TAGCTGACTCGTTGTAGTTGCGCATCATCAGCCGTCCTAGTCCGCAGATCGAACTCGGAGCCGTCGACTGCTCCG
TCGCCCTCGTCGTCTGCGATCTTGACCTTCCGGACGCGCCCATCGTCTACGCTTCCGACTCCTTCTGTGACATGA
CCGGTTACTCCACGGCCGAAGTCTTGGGCCGTAACTGTCGCTTCCTGCAGTCTCATGGTCATAACCGGTCCCGGA
TGCCTGTCGCTACCTCTACCAAGGTCATGGCTCAGCAGATCAGTAGTGCCGTCGAGGCCGGTCGTGAGATTCAGG
TCACGCTGCCCAACTACAAGAAGAACGGGCAGCTATTCAATAACTTCCTGAGCATCATCCCCGTCGAGAGACAAG
CCGGCCATCGCTACGCCGTCGGATTCCAAGTCCAAGTCGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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