Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|01173
Gene name
Locationscaffold_01:4271274..4272424
Strand+
Gene length (bp)1150
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00134 Cyclin_N Cyclin, N-terminal domain 2.2E-16 61 191
PF08613 Cyclin Cyclin 2.5E-05 91 190

GO

GO Term Description Terminal node
GO:0019901 protein kinase binding Yes
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Yes
GO:0043549 regulation of kinase activity No
GO:0050794 regulation of cellular process No
GO:0080090 regulation of primary metabolic process No
GO:0050789 regulation of biological process No
GO:0051338 regulation of transferase activity No
GO:0005488 binding No
GO:0051174 regulation of phosphorus metabolic process No
GO:0051246 regulation of protein metabolic process No
GO:0065009 regulation of molecular function No
GO:0050790 regulation of catalytic activity No
GO:0031399 regulation of protein modification process No
GO:0031323 regulation of cellular metabolic process No
GO:0042325 regulation of phosphorylation No
GO:0001932 regulation of protein phosphorylation No
GO:0003674 molecular_function No
GO:1904029 regulation of cyclin-dependent protein kinase activity No
GO:0019222 regulation of metabolic process No
GO:0005515 protein binding No
GO:0051726 regulation of cell cycle No
GO:0065007 biological regulation No
GO:0019220 regulation of phosphate metabolic process No
GO:0019900 kinase binding No
GO:0060255 regulation of macromolecule metabolic process No
GO:0045859 regulation of protein kinase activity No
GO:0008150 biological_process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0019899 enzyme binding No
GO:0071900 regulation of protein serine/threonine kinase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5653 0.7269 0.0795 0.1464 0.1691 0.0031 0.1155 0.1113 0.0428 0.0153

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 33.27 16.70 49.83
Alive In ants, during behavior modification 205.42 99.00 311.85
Dead In ants, recently dead 54.75 29.46 80.03

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.000238 yes
Alive Dead 0.000238 yes
Dead Fungus 0.014402 yes

Orthologs

Orthofinder run ID4
Orthogroup3117
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|689
Ophiocordyceps australis map64 (Brazil) OphauB2|7059
Ophiocordyceps camponoti-floridani Ophcf2|01173 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6050
Ophiocordyceps kimflemingae Ophio5|493
Ophiocordyceps subramaniannii Hirsu2|5460

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|01173
MASRHLSREELNKLALEHFVYQPVGRDMIAYLAEAAHNVIACDSALYPADHPHHRQQQQQQQQPQPQQQHHHHHH
HQQQQHQQQQQQRHFITQLVVSSNVQVPTLMSTLVYLTRLKSKLQPMARGLRCTTHRIFLASLILAAKYLNDSSP
KNKHWANYTQVTTESYTFGFNRTEVNLMEKQLLFLLDWELRIDESDLYRELDGFLDPLRLRIVERHARKMRQREE
KRRLQQQQQLQQQQDPYSRHSSPTSSSSSSSSTSRASSRSRAAGSLSPPGLAYSSSSSSYASSVSSSRQHSRSTT
PLASEPCKPPPCDSPVEIVVDAGSLAYDLTPEDYLQLQESSAKKRHKRGVWGRLLGGAVTVR*
Coding >Ophcf2|01173
ATGGCTTCACGCCATCTTTCTCGCGAGGAGCTTAACAAGCTGGCTCTCGAGCATTTCGTCTATCAGCCTGTTGGC
AGGGATATGATTGCCTACCTCGCCGAGGCTGCTCACAACGTCATCGCCTGCGACTCGGCTCTCTATCCGGCCGAT
CATCCGCATCACCGCCAGCAGCAACAACAACAGCAACAACCACAACCACAACAACAACATCATCATCATCATCAT
CATCAACAACAACAACACCAACAACAACAACAACAACGACACTTCATCACCCAGCTCGTCGTCTCTTCCAACGTC
CAGGTCCCGACCCTAATGTCAACCCTCGTCTATCTCACCCGCCTCAAGTCCAAGCTCCAACCCATGGCCCGCGGC
CTCCGCTGCACCACCCACCGCATCTTCCTCGCCTCGCTCATCCTGGCGGCAAAGTACCTCAACGACAGCTCGCCC
AAGAACAAGCACTGGGCCAACTACACACAAGTCACCACCGAATCCTACACTTTTGGCTTCAACCGTACGGAGGTC
AACCTCATGGAGAAGCAGCTGCTCTTCCTCCTCGACTGGGAACTCCGCATCGACGAATCGGATCTCTATCGCGAA
CTCGACGGCTTCCTCGACCCTCTCCGCCTCCGCATCGTCGAGCGTCACGCCCGCAAGATGCGCCAGCGCGAAGAG
AAGCGCCGCCTACAACAACAACAACAGCTTCAGCAGCAGCAGGACCCCTACTCTCGCCACTCCAGCCCAACCTCC
TCCTCCTCCTCCTCCTCCTCCACCTCGAGAGCCTCCTCCCGCTCCCGCGCCGCAGGCTCCCTCTCCCCCCCCGGC
CTCGCCTACAGCAGCTCCTCGAGCTCCTACGCCTCCTCCGTCTCCTCCAGCCGCCAGCATTCCCGCTCCACCACG
CCCCTCGCCTCAGAACCCTGCAAGCCTCCCCCCTGCGACTCCCCCGTCGAGATCGTCGTCGACGCCGGCAGCCTC
GCCTACGACCTCACGCCCGAAGACTACCTCCAGCTGCAGGAGTCATCGGCCAAGAAGCGTCATAAGCGCGGCGTG
TGGGGGCGTCTGCTGGGCGGAGCCGTCACCGTTCGTTAG
Transcript >Ophcf2|01173
ATGGCTTCACGCCATCTTTCTCGCGAGGAGCTTAACAAGCTGGCTCTCGAGCATTTCGTCTATCAGCCTGTTGGC
AGGGATATGATTGCCTACCTCGCCGAGGCTGCTCACAACGTCATCGCCTGCGACTCGGCTCTCTATCCGGCCGAT
CATCCGCATCACCGCCAGCAGCAACAACAACAGCAACAACCACAACCACAACAACAACATCATCATCATCATCAT
CATCAACAACAACAACACCAACAACAACAACAACAACGACACTTCATCACCCAGCTCGTCGTCTCTTCCAACGTC
CAGGTCCCGACCCTAATGTCAACCCTCGTCTATCTCACCCGCCTCAAGTCCAAGCTCCAACCCATGGCCCGCGGC
CTCCGCTGCACCACCCACCGCATCTTCCTCGCCTCGCTCATCCTGGCGGCAAAGTACCTCAACGACAGCTCGCCC
AAGAACAAGCACTGGGCCAACTACACACAAGTCACCACCGAATCCTACACTTTTGGCTTCAACCGTACGGAGGTC
AACCTCATGGAGAAGCAGCTGCTCTTCCTCCTCGACTGGGAACTCCGCATCGACGAATCGGATCTCTATCGCGAA
CTCGACGGCTTCCTCGACCCTCTCCGCCTCCGCATCGTCGAGCGTCACGCCCGCAAGATGCGCCAGCGCGAAGAG
AAGCGCCGCCTACAACAACAACAACAGCTTCAGCAGCAGCAGGACCCCTACTCTCGCCACTCCAGCCCAACCTCC
TCCTCCTCCTCCTCCTCCTCCACCTCGAGAGCCTCCTCCCGCTCCCGCGCCGCAGGCTCCCTCTCCCCCCCCGGC
CTCGCCTACAGCAGCTCCTCGAGCTCCTACGCCTCCTCCGTCTCCTCCAGCCGCCAGCATTCCCGCTCCACCACG
CCCCTCGCCTCAGAACCCTGCAAGCCTCCCCCCTGCGACTCCCCCGTCGAGATCGTCGTCGACGCCGGCAGCCTC
GCCTACGACCTCACGCCCGAAGACTACCTCCAGCTGCAGGAGTCATCGGCCAAGAAGCGTCATAAGCGCGGCGTG
TGGGGGCGTCTGCTGGGCGGAGCCGTCACCGTTCGTTAG
Gene >Ophcf2|01173
ATGGCTTCACGCCATCTTTCTCGCGAGGAGCTTAACAAGCTGGCTCTCGAGCATTTCGTCTATCAGCCTGTTGGC
AGGGATATGATTGCCTACCTCGCCGAGGCTGCTCACAACGTCATCGCCTGCGACTCGGCTCTCTATCCGGCCGAT
CATCCGCATCACCGCCAGCAGCAACAACAACAGCAACAACCACAACCACAACAACAACATCATCATCATCATCAT
CATCAACAACAACAACACCAACAACAACAACAACAACGACGTCTCCTCCCACCCCCCCGGAGCCCCCCTCCGAAG
CAGACGACTCCTCCCCTCCCTCCAAGACTTCATCACCCAGCTCGTCGTCTCTTCCAACGTCCAGGTCCCGACCCT
AATGTCAACCCTCGTCTATCTCACCCGCCTCAAGTCCAAGCTCCAACCCATGGCCCGCGGCCTCCGCTGCACCAC
CCACCGCATCTTCCTCGCCTCGCTCATCCTGGCGGCAAAGTACCTCAACGACAGCTCGCCCAAGAACAAGCACTG
GGCCAACTACACACAAGTCACCACCGAATCCTACACTTTTGGCTTCAACCGTACGGAGGTCAACCTCATGGAGAA
GCAGCTGCTCTTCCTCCTCGACTGGGAACTCCGCATCGACGAATCGGATCTCTATCGCGAACTCGACGGCTTCCT
CGACCCTCTCCGCCTCCGCATCGTCGAGCGTCACGCCCGCAAGATGCGCCAGCGCGAAGAGAAGCGCCGCCTACA
ACAACAACAACAGCTTCAGCAGCAGCAGGACCCCTACTCTCGCCACTCCAGCCCAACCTCCTCCTCCTCCTCCTC
CTCCTCCACCTCGAGAGCCTCCTCCCGCTCCCGCGCCGCAGGCTCCCTCTCCCCCCCCGGCCTCGCCTACAGCAG
CTCCTCGAGCTCCTACGCCTCCTCCGTCTCCTCCAGCCGCCAGCATTCCCGCTCCACCACGCCCCTCGCCTCAGA
ACCCTGCAAGCCTCCCCCCTGCGACTCCCCCGTCGAGATCGTCGTCGACGCCGGCAGCCTCGCCTACGACCTCAC
GCCCGAAGACTACCTCCAGCTGCAGGAGTCATCGGCCAAGAAGCGTCATAAGCGCGGCGTGTGGGGGCGTCTGCT
GGGCGGAGCCGTCACCGTTCGTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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